miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>55078_zma-miR396g:pmrd
          Length = 117

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 1  ttccacagctttcttgaacttcttctt 27
          |||||||||||||||||||||||||||
Sbjct: 3  ttccacagctttcttgaacttcttctt 29




>55077_zma-miR396f:pmrd
          Length = 166

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 1  ttccacagctttcttgaacttcttctt 27
          |||||||||||||||||||||||||||
Sbjct: 3  ttccacagctttcttgaacttcttctt 29




>54869_vvi-miR396b:pmrd
          Length = 108

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 1  ttccacagctttcttgaacttcttct 26
          ||||||||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaacttcttct 39



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 3  ccacagctttcttgaacttc 22
          ||||||||||||||||||||
Sbjct: 95 ccacagctttcttgaacttc 76




>53179_ptc-miRf11357-akr:pmrd
          Length = 141

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 1   ttccacagctttcttgaacttctt 24
           ||||||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaacttctt 111




>52080_ptc-miRf10258-akr:pmrd
          Length = 141

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 1   ttccacagctttcttgaacttctt 24
           ||||||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaacttctt 111




>51738_ptc-miR396e:pmrd
          Length = 145

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaacttctt 24
          ||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttctt 34




>48748_mtr-miR396a:pmrd
          Length = 93

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaacttctt 24
          ||||||||||||||||||||||||
Sbjct: 6  ttccacagctttcttgaacttctt 29




>48580_gma-miR396c:pmrd
          Length = 117

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaacttctt 24
          ||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttctt 44




>48579_gma-miR396b:pmrd
          Length = 126

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaacttctt 24
          ||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttctt 44




>54487_sbi-miR396c:pmrd
          Length = 162

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaacttct 23
          |||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttct 43




>48947_osa-miR396c:pmrd
          Length = 141

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaacttct 23
          |||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttct 33




>52893_ptc-miRf11071-akr:pmrd
          Length = 148

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   ttccacagctttcttgaacttc 22
           ||||||||||||||||||||||
Sbjct: 142 ttccacagctttcttgaacttc 121




>52304_ptc-miRf10482-akr:pmrd
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 1  ttccacagctttcttgaacttc 22
          ||||||||||||||||||||||
Sbjct: 93 ttccacagctttcttgaacttc 72



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaacttctt 24
          |||||| |||||||||||||||||
Sbjct: 10 ttccacggctttcttgaacttctt 33




>51737_ptc-miR396d:pmrd
          Length = 154

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttccacagctttcttgaacttc 22
          ||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttc 32




>51736_ptc-miR396c:pmrd
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttccacagctttcttgaacttc 22
          ||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttc 32



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  ttccacagctttcttgaacttctt 24
          |||||| |||||||||||||||||
Sbjct: 94 ttccacggctttcttgaacttctt 71




>51564_pta-miR396:pmrd
          Length = 119

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttccacagctttcttgaactt 21
          |||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaactt 37




>48374_bna-miR396a:pmrd
          Length = 117

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttccacagctttcttgaactt 21
          |||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactt 21




>47009_ath-miR396b:pmrd
          Length = 135

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttccacagctttcttgaactt 21
          |||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactt 31




>46888_aqc-miR396b:pmrd
          Length = 89

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttccacagctttcttgaactt 21
          |||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactt 21




>55083_zma-miR396l:pmrd
          Length = 97

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>55082_zma-miR396k:pmrd
          Length = 98

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>55081_zma-miR396j:pmrd
          Length = 98

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>55080_zma-miR396i:pmrd
          Length = 103

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>55079_zma-miR396h:pmrd
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 4  ttccacagctttcttgaact 23




>55074_zma-miR396c:pmrd
          Length = 104

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 4  ttccacagctttcttgaact 23




>55073_zma-miR396b:pmrd
          Length = 136

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>55072_zma-miR396a:pmrd
          Length = 137

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>54871_vvi-miR396d:pmrd
          Length = 120

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>54870_vvi-miR396c:pmrd
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>54868_vvi-miR396a:pmrd
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33




>54645_sof-miR396:pmrd
          Length = 134

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>54584_smo-miR396:pmrd
          Length = 168

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   ccacagctttcttgaacttc 22
           ||||||||||||||||||||
Sbjct: 153 ccacagctttcttgaacttc 134




>54486_sbi-miR396b:pmrd
          Length = 128

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>54485_sbi-miR396a:pmrd
          Length = 125

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>52079_ptc-miRf10257-akr:pmrd
          Length = 130

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 9  ttccacagctttcttgaact 28




>51735_ptc-miR396b:pmrd
          Length = 132

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>51734_ptc-miR396a:pmrd
          Length = 123

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>48946_osa-miR396b:pmrd
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>48945_osa-miR396a:pmrd
          Length = 154

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>48680_lja-miR396:pmrd
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35




>48578_gma-miR396a:pmrd
          Length = 140

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>48508_ghr-miR396c:pmrd
          Length = 115

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>48507_ghr-miR396b:pmrd
          Length = 115

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>48485_gcl-miR396a:pmrd
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   ttccacagctttcttgaact 20
           ||||||||||||||||||||
Sbjct: 101 ttccacagctttcttgaact 82




>48110_ath-miRf11010-akr:pmrd
          Length = 165

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 18 ttccacagctttcttgaact 37




>47008_ath-miR396a:pmrd
          Length = 151

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>46887_aqc-miR396a:pmrd
          Length = 122

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20