miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51746_ptc-miR398c:pmrd
          Length = 97

 Score = 65.9 bits (33), Expect = 3e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 1  caggagcgacctgaaatcacatgtgggctgcac 33
          |||||||||||||||||||||||||||||||||
Sbjct: 11 caggagcgacctgaaatcacatgtgggctgcac 43



 Score = 54.0 bits (27), Expect = 1e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 35 gcaacatgtgttctcaggtcgcccctg 61
          |||||||||||||||||||||||||||
Sbjct: 62 gcaacatgtgttctcaggtcgcccctg 88




>54876_vvi-miR398c:pmrd
          Length = 88

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 39 catgtgttctcaggtcgcccctg 61
          |||||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccctg 78




>54875_vvi-miR398b:pmrd
          Length = 88

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 39 catgtgttctcaggtcgcccctg 61
          |||||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccctg 78




>51745_ptc-miR398b:pmrd
          Length = 85

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 39 catgtgttctcaggtcgcccctg 61
          |||||||||||||||||||||||
Sbjct: 54 catgtgttctcaggtcgcccctg 76




>48749_mtr-miR398a:pmrd
          Length = 77

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 39 catgtgttctcaggtcgcccctg 61
          |||||||||||||||||||||||
Sbjct: 55 catgtgttctcaggtcgcccctg 77




>46890_aqc-miR398b:pmrd
          Length = 93

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 39 catgtgttctcaggtcgcccctg 61
          |||||||||||||||||||||||
Sbjct: 70 catgtgttctcaggtcgcccctg 92




>55090_zma-miR398c:pmrd
          Length = 108

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 39  catgtgttctcaggtcgcccc 59
           |||||||||||||||||||||
Sbjct: 86  catgtgttctcaggtcgcccc 106




>55089_zma-miR398b:pmrd
          Length = 142

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 39  catgtgttctcaggtcgcccc 59
           |||||||||||||||||||||
Sbjct: 119 catgtgttctcaggtcgcccc 139




>55088_zma-miR398a:pmrd
          Length = 142

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 39 catgtgttctcaggtcgcccc 59
          |||||||||||||||||||||
Sbjct: 24 catgtgttctcaggtcgcccc 4




>54744_tae-miR2025:pmrd
          Length = 96

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 catgtgttctcaggtcgcccc 59
          |||||||||||||||||||||
Sbjct: 69 catgtgttctcaggtcgcccc 89




>48963_osa-miR398b:pmrd
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 41 tgtgttctcaggtcgcccctg 61
          |||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctg 78




>47014_ath-miR398c:pmrd
          Length = 115

 Score = 38.2 bits (19), Expect = 6e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 39  catgtgttctcaggtcgcccctg 61
           |||||||||||||||| ||||||
Sbjct: 83  catgtgttctcaggtcacccctg 105




>47013_ath-miR398b:pmrd
          Length = 116

 Score = 38.2 bits (19), Expect = 6e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 39  catgtgttctcaggtcgcccctg 61
           |||||||||||||||| ||||||
Sbjct: 84  catgtgttctcaggtcacccctg 106