miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54450_sbi-miR169n:pmrd
Length = 93
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 gtggtctcatgggcagtccccttggctag 99
|||||||||||||||||| ||||||||||
Sbjct: 62 gtggtctcatgggcagtctccttggctag 90
>54448_sbi-miR169l:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 tagccaatgatgacttgcctgtgtc 25
||||||| |||||||||||||||||
Sbjct: 94 tagccaaggatgacttgcctgtgtc 70
>48892_osa-miR169q:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 tagccaatgatgacttgcctgtgtc 25
||||||| |||||||||||||||||
Sbjct: 98 tagccaaggatgacttgcctgtgtc 74
>48887_osa-miR169l:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tagccaatgatgacttgcctgtgtc 25
||||||| |||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctgtgtc 35
>48885_osa-miR169j:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tagccaatgatgacttgcctgtgtc 25
||||||| |||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctgtgtc 35
>48884_osa-miR169i:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tagccaatgatgacttgcctgtgtc 25
||||||| |||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctgtgtc 35
>48883_osa-miR169h:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tagccaatgatgacttgcctgtgtc 25
||||||| |||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctgtgtc 35
>55011_zma-miR169i:pmrd
Length = 191
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tagccaatgatgacttgcctgtgt 24
||||||| ||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcctgtgt 44
>54441_sbi-miR169e:pmrd
Length = 240
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tagccaatgatgacttgcctgtgt 24
||||||| ||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcctgtgt 44
