miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48649_hte-miR168:pmrd
          Length = 140

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  tcgcttggtgcaggtcgggaactgc 25
          |||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactgc 25




>54388_rco-miR168:pmrd
          Length = 156

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaactg 42



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 118 tcccgccttgcatcaactga 137




>54375_pts-miR168b:pmrd
          Length = 140

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactg 24



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 121 tcccgccttgcatcaactga 140




>54374_pts-miR168a:pmrd
          Length = 118

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactg 24



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 99  tcccgccttgcatcaactga 118




>54366_ptr-miR168:pmrd
          Length = 118

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactg 24



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 99  tcccgccttgcatcaactga 118




>51651_ptc-miR168b:pmrd
          Length = 136

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaactg 34



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 109 tcccgccttgcatcaactga 128




>51650_ptc-miR168a:pmrd
          Length = 160

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaactg 34



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 133 tcccgccttgcatcaactga 152




>48349_bna-miR168:pmrd
          Length = 133

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaactg 41




>46958_ath-miR168b:pmrd
          Length = 124

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tcgcttggtgcaggtcgggaactg 24
          ||||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaactg 42




>54802_vvi-miR168:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgcttggtgcaggtcgggaac 22
          ||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaac 32



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactga 120




>54436_sbi-miR168:pmrd
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 1  tcgcttggtgcaggtcgggaactgccgccg 30
          ||||||||||||| |||||| |||||||||
Sbjct: 21 tcgcttggtgcagatcgggacctgccgccg 50




>48560_gma-miR168:pmrd
          Length = 125

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgcttggtgcaggtcgggaac 22
          ||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaac 40



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 87  tcccgccttgcatcaactga 106




>47339_ath-miRf10239-akr:pmrd
          Length = 129

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgcttggtgcaggtcgggaac 22
          ||||||||||||||||||||||
Sbjct: 13 tcgcttggtgcaggtcgggaac 34



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 97  tcccgccttgcatcaactga 116




>46959_ath-miR168m:pmrd
          Length = 104

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgcttggtgcaggtcgggaac 22
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 85  tcccgccttgcatcaactga 104




>46957_ath-miR168a:pmrd
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgcttggtgcaggtcgggaac 22
          ||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 102 tcccgccttgcatcaactga 121




>48875_osa-miR168m:pmrd
          Length = 67

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 1  tcgcttggtgcaggtcgggaactgccgccgccg 33
          ||||||||||||| |||||| | ||||||||||
Sbjct: 1  tcgcttggtgcagatcgggacccgccgccgccg 33




>48873_osa-miR168a:pmrd
          Length = 87

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 1  tcgcttggtgcaggtcgggaactgccgccgccg 33
          ||||||||||||| |||||| | ||||||||||
Sbjct: 11 tcgcttggtgcagatcgggacccgccgccgccg 43




>48872_osa-miR168a:pmrd
          Length = 87

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 1  tcgcttggtgcaggtcgggaactgccgccgccg 33
          ||||||||||||| |||||| | ||||||||||
Sbjct: 11 tcgcttggtgcagatcgggacccgccgccgccg 43




>48871_osa-miR168a:pmrd
          Length = 87

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 1  tcgcttggtgcaggtcgggaactgccgccgccg 33
          ||||||||||||| |||||| | ||||||||||
Sbjct: 11 tcgcttggtgcagatcgggacccgccgccgccg 43




>54665_stu-miR168:pmrd
          Length = 133

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tcgcttggtgcaggtcggga 20
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcccgccttgcatcaactga 96
           ||||||||||||||||||||
Sbjct: 114 tcccgccttgcatcaactga 133




>54546_sly-miR168:pmrd
          Length = 145

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tcgcttggtgcaggtcggga 20
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20