miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48695_mtr-miR156e:pmrd
          Length = 172

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 55  tcactccttcgtgctctctatgcttctgtcat 86
           ||||||||| ||||||||||||||||||||||
Sbjct: 137 tcactcctttgtgctctctatgcttctgtcat 168



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 6  ttgacagaagatagagagcacaga 29




>46862_aqc-miR156b:pmrd
          Length = 83

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 55 tcactccttcgtgctctctatgcttctgtcat 86
          ||||||||| ||||||||||||||||||||||
Sbjct: 51 tcactcctttgtgctctctatgcttctgtcat 82



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  tgacagaagatagagagcacaga 24
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagatagagagcacaga 23




>52045_ptc-miRf10223-akr:pmrd
          Length = 86

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 56 cactccttcgtgctctctatgcttctgtcat 86
          |||||||| ||||||||||||||||||||||
Sbjct: 54 cactcctttgtgctctctatgcttctgtcat 84



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 3  ttgacagaagatagagagcacaga 26




>51600_ptc-miR156j:pmrd
          Length = 100

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 56 cactccttcgtgctctctatgcttctgtcat 86
          |||||||| ||||||||||||||||||||||
Sbjct: 62 cactcctttgtgctctctatgcttctgtcat 92



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaga 34




>48631_gra-miR157b:pmrd
          Length = 91

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 56 cactccttcgtgctctctatgcttctgtcat 86
          |||||||| ||||||||||||||||||||||
Sbjct: 57 cactcctttgtgctctctatgcttctgtcat 87



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 5  ttgacagaagatagagagcacaga 28




>54774_vvi-miR156i:pmrd
          Length = 103

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaga 34



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 55 tcactccttcgtgctctctatgcttctgtcat 86
          ||||||||| ||||||||||| ||||||||||
Sbjct: 60 tcactcctttgtgctctctattcttctgtcat 91




>54772_vvi-miR156g:pmrd
          Length = 103

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaga 34




>51599_ptc-miR156i:pmrd
          Length = 99

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaga 34



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 55 tcactccttcgtgctctctatgcttctg 82
          ||||||||| ||||||||||||||||||
Sbjct: 61 tcactcctttgtgctctctatgcttctg 88




>51597_ptc-miR156g:pmrd
          Length = 103

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaga 34




>48790_nta-miR157:pmrd
          Length = 131

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagcacaga 24




>48697_mtr-miR156h:pmrd
          Length = 94

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 6  ttgacagaagatagagagcacaga 29




>48630_gra-miR157a:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 5  ttgacagaagatagagagcacaga 28



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 56 cactccttcgtgctctctatgcttctgtcat 86
          |||||||| ||||||| ||||||||||||||
Sbjct: 67 cactcctttgtgctctttatgcttctgtcat 97




>48531_gma-miR156d:pmrd
          Length = 151

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcacaga 44



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 57  actccttcgtgctctctatgcttctgtcat 86
           ||||||| ||||||||||| ||||||||||
Sbjct: 103 actcctttgtgctctctatacttctgtcat 132




>46925_ath-miR157b:pmrd
          Length = 132

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 19 ttgacagaagatagagagcacaga 42




>46924_ath-miR157a:pmrd
          Length = 98

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttgacagaagatagagagcacaga 24
          ||||||||||||||||||||||||
Sbjct: 4  ttgacagaagatagagagcacaga 27




>54570_smo-miR156b:pmrd
          Length = 112

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  tgacagaagatagagagcacaga 24
          |||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacaga 34



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 62  ttcgtgctctctatgcttctgtcat 86
           |||||||||||||| ||||||||||
Sbjct: 77  ttcgtgctctctattcttctgtcat 101




>46861_aqc-miR156a:pmrd
          Length = 81

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  tgacagaagatagagagcacaga 24
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagatagagagcacaga 23



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 65 gtgctctctatgcttctgtca 85
          |||||||||||||||||||||
Sbjct: 59 gtgctctctatgcttctgtca 79




>54771_vvi-miR156f:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttgacagaagatagagagcaca 22
          ||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcaca 32




>54661_stu-miR157a:pmrd
          Length = 91

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 65 gtgctctctatgcttctgtcat 86
          ||||||||||||||||||||||
Sbjct: 70 gtgctctctatgcttctgtcat 91



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagcac 21




>54532_sly-miR156a:pmrd
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 65  gtgctctctatgcttctgtcat 86
           ||||||||||||||||||||||
Sbjct: 79  gtgctctctatgcttctgtcat 100



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagcac 21




>48696_mtr-miR156f:pmrd
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttgacagaagatagagagcaca 22
          ||||||||||||||||||||||
Sbjct: 6  ttgacagaagatagagagcaca 27




>48675_lja-miR157a:pmrd
          Length = 58

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttgacagaagatagagagcaca 22
          ||||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagcaca 22




>48530_gma-miR156c:pmrd
          Length = 185

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 1   ttgacagaagatagagagcaca 22
           ||||||||||||||||||||||
Sbjct: 146 ttgacagaagatagagagcaca 167




>46927_ath-miR157d:pmrd
          Length = 221

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 65  gtgctctctatgcttctgtcat 86
           ||||||||||||||||||||||
Sbjct: 173 gtgctctctatgcttctgtcat 194



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 2  tgacagaagatagagagcac 21
          ||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43




>54534_sly-miR156c:pmrd
          Length = 83

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagcac 21




>54533_sly-miR156b:pmrd
          Length = 84

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagcac 21




>52807_ptc-miRf10985-akr:pmrd
          Length = 87

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 2  ttgacagaagatagagagcac 22




>51598_ptc-miR156h:pmrd
          Length = 103

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31




>51552_pta-miR156b:pmrd
          Length = 83

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  tgacagaagatagagagcaca 22
          |||||||||||||||||||||
Sbjct: 3  tgacagaagatagagagcaca 23




>51551_pta-miR156a:pmrd
          Length = 83

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  tgacagaagatagagagcaca 22
          |||||||||||||||||||||
Sbjct: 3  tgacagaagatagagagcaca 23




>48537_gma-miR157c:pmrd
          Length = 84

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 84 ttgacagaagatagagagcac 64




>48532_gma-miR156e:pmrd
          Length = 124

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcac 41




>48393_bra-miR157a:pmrd
          Length = 149

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 14 ttgacagaagatagagagcac 34



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 57  actccttcgtgctctctatgcttctgtca 85
           |||| |||||||||||||| |||||||||
Sbjct: 111 actctttcgtgctctctatacttctgtca 139




>48384_bol-miR157a:pmrd
          Length = 106

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 6  ttgacagaagatagagagcac 26




>48338_bna-miR156c:pmrd
          Length = 155

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 18 ttgacagaagatagagagcac 38




>48337_bna-miR156b:pmrd
          Length = 208

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 25 ttgacagaagatagagagcac 45



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 57  actccttcgtgctctctatgcttctgtca 85
           |||| |||||||||||||| |||||||||
Sbjct: 150 actctttcgtgctctctatacttctgtca 178




>46926_ath-miR157c:pmrd
          Length = 217

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttgacagaagatagagagcac 21
          |||||||||||||||||||||
Sbjct: 24 ttgacagaagatagagagcac 44




>54537_sly-miR157c:pmrd
          Length = 123

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   ttgacagaagatagagagca 20
           ||||||||||||||||||||
Sbjct: 103 ttgacagaagatagagagca 122




>54536_sly-miR157b:pmrd
          Length = 430

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttgacagaagatagagagca 20
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagca 20




>54535_sly-miR157a:pmrd
          Length = 53

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttgacagaagatagagagca 20
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagca 20




>51323_pco-miR157:pmrd
          Length = 184

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttgacagaagatagagagca 20
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagca 20




>48677_lja-miR157c:pmrd
          Length = 460

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttgacagaagatagagagca 20
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagca 20




>48670_ini-miR157b:pmrd
          Length = 183

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttgacagaagatagagagca 20
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagca 20




>48669_ini-miR157a:pmrd
          Length = 126

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttgacagaagatagagagca 20
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagca 20




>48668_iba-miR157:pmrd
          Length = 283

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttgacagaagatagagagca 20
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagatagagagca 20




>54531_sin-miR157:pmrd
          Length = 83

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttgacagaagatagagagcacag 23
          ||||||||||| |||||||||||
Sbjct: 1  ttgacagaagagagagagcacag 23




>48684_lsa-miR157:pmrd
          Length = 357

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  ttgacagaagatagagagcacag 23
          ||||||||||| |||||||||||
Sbjct: 1  ttgacagaagagagagagcacag 23




>48305_bdi-miR156:pmrd
          Length = 147

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 1   ttgacagaagatagagagcacag 23
           ||||||||||| |||||||||||
Sbjct: 100 ttgacagaagagagagagcacag 122