miRNEST 2.0, an integrative microRNA resource :: BLAST
>48480_far-miR396:pmrd
Length = 99
Score = 85.7 bits (43), Expect = 6e-18
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcgcgcgcg 47
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6 gcggccatgctctccacaggctttcttgaactgtgaactcgcgcgcg 52
>48797_oru-miR396:pmrd
Length = 178
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 3 ggccatgctctccacaggctttcttgaactgtcaactcg 41
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 ggccatgctctccacaggctttcttgaactgtgaactcg 39
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatg 102
|||||| ||||||||||||||||||||||||||
Sbjct: 142 gttgatagttcaagaaagtccttggaaaacatg 174
>48954_osa-miR396f:pmrd
Length = 176
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 4 gccatgctctccacaggctttcttgaactgtcaactcg 41
||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgtgaactcg 38
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatg 102
|||||| ||||||||||||||||||||||||||
Sbjct: 141 gttgatagttcaagaaagtccttggaaaacatg 173
>48953_osa-miR396f:pmrd
Length = 176
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 4 gccatgctctccacaggctttcttgaactgtcaactcg 41
||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgtgaactcg 38
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatg 102
|||||| ||||||||||||||||||||||||||
Sbjct: 141 gttgatagttcaagaaagtccttggaaaacatg 173
>48952_osa-miR396f:pmrd
Length = 176
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 4 gccatgctctccacaggctttcttgaactgtcaactcg 41
||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgtgaactcg 38
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatg 102
|||||| ||||||||||||||||||||||||||
Sbjct: 141 gttgatagttcaagaaagtccttggaaaacatg 173
>48951_osa-miR396e:pmrd
Length = 184
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcg 41
|||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcg 41
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatgcc 104
|||||||||||||||||| || |||||| ||||||
Sbjct: 148 gttgatggttcaagaaagcccatggaaaccatgcc 182
>48950_osa-miR396e:pmrd
Length = 184
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcg 41
|||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcg 41
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatgcc 104
|||||||||||||||||| || |||||| ||||||
Sbjct: 148 gttgatggttcaagaaagcccatggaaaccatgcc 182
>48949_osa-miR396e:pmrd
Length = 184
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcg 41
|||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcg 41
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaaacatgcc 104
|||||||||||||||||| || |||||| ||||||
Sbjct: 148 gttgatggttcaagaaagcccatggaaaccatgcc 182
>48948_osa-miR396d:pmrd
Length = 142
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 gcggccatgctctccacaggctttcttgaactgtcaactcg 41
|||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 9 gcgggcatgctttccacaggctttcttgaactgtgaactcg 49
>55085_zma-miR396n:pmrd
Length = 186
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 tccacaggctttcttgaactgtcaactcg 41
|||||||||||||||||||||| ||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcg 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaa 97
|||||||||||||||||| || ||||||
Sbjct: 159 gttgatggttcaagaaagcccatggaaa 186
>55084_zma-miR396m:pmrd
Length = 227
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 tccacaggctttcttgaactgtcaactcg 41
|||||||||||||||||||||| ||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcg 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaa 97
|||||||||||||||||| || ||||||
Sbjct: 200 gttgatggttcaagaaagcccatggaaa 227
>55076_zma-miR396e:pmrd
Length = 186
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 tccacaggctttcttgaactgtcaactcg 41
|||||||||||||||||||||| ||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcg 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaa 97
|||||||||||||||||| || ||||||
Sbjct: 159 gttgatggttcaagaaagcccatggaaa 186
>55075_zma-miR396d:pmrd
Length = 186
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 tccacaggctttcttgaactgtcaactcg 41
|||||||||||||||||||||| ||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcg 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaa 97
|||||||||||||||||| || ||||||
Sbjct: 159 gttgatggttcaagaaagcccatggaaa 186
>54488_sbi-miR396e:pmrd
Length = 189
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 tccacaggctttcttgaactgtcaactcg 41
|||||||||||||||||||||| ||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcg 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 gttgatggttcaagaaagtccttggaaa 97
|||||||||||||||||| || ||||||
Sbjct: 161 gttgatggttcaagaaagcccatggaaa 188
