miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51556_pta-miR163a:pmrd
Length = 93
Score = 184 bits (93), Expect = 6e-47
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 tgaagaagacttggagcttcgacttggactggcagttacaggaaggacatcagcagagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagaagacttggagcttcgacttggactggcagttacaggaaggacatcagcagagca 60
Query: 61 caatccccgtcgcaggcatggtagagttcctcc 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 caatccccgtcgcaggcatggtagagttcctcc 93
>51548_psi-miR163:pmrd
Length = 93
Score = 123 bits (62), Expect = 2e-28
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 1 tgaagaagacttggagcttcgacttggactggcagttacaggaaggacatcagcagagca 60
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |
Sbjct: 1 tgaagaagacttggagcttcgacttggactgacagttccaggaaggacatcagcagaccc 60
Query: 61 caatccccgtcgcaggca 78
||||||||||||||||||
Sbjct: 61 caatccccgtcgcaggca 78
>51335_pga-miR163:pmrd
Length = 74
Score = 123 bits (62), Expect = 2e-28
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 tgaagaagacttggagcttcgacttggactggcagttacaggaaggacatcagcagagca 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 1 tgaagaagacttggagcttcgacttggacttacagttacaggaaggacatcagcagacca 60
Query: 61 caatccccgtcgca 74
||||||||||||||
Sbjct: 61 caatccccgtcgca 74
