miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51641_ptc-miR166q:pmrd
          Length = 151

 Score = 97.6 bits (49), Expect = 2e-21
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                      
Query: 3  aggttgagaggaacgctgtctgggtcgaggtcatggaggccatgattatacataaatggc 62
          ||||||||||||| | ||||||| |||||||||| ||||||||||||||||| | |||||
Sbjct: 3  aggttgagaggaatgttgtctggctcgaggtcattgaggccatgattatacagacatggc 62

                           
Query: 63 attatctgatgacagcc 79
          |||| ||||||||||||
Sbjct: 63 attacctgatgacagcc 79




>52336_ptc-miRf10514-akr:pmrd
          Length = 144

 Score = 93.7 bits (47), Expect = 3e-20
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                      
Query: 5  gttgagaggaacgctgtctgggtcgaggtcatggaggccatgattatacataaatggcat 64
          ||||||||||| | ||||||| |||||||||| ||||||||||||||||| | |||||||
Sbjct: 1  gttgagaggaatgttgtctggctcgaggtcattgaggccatgattatacagacatggcat 60

                         
Query: 65 tatctgatgacagcc 79
          || ||||||||||||
Sbjct: 61 tacctgatgacagcc 75




>48345_bna-miR166d:pmrd
          Length = 128

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 104 aacctaaatgattctcggaccaggctccattcc 136
           |||||||||||||||||||||||||| ||||||
Sbjct: 63  aacctaaatgattctcggaccaggcttcattcc 95




>54379_pvu-miR166:pmrd
          Length = 144

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 3  aggttgagaggaacgctgtctgggtcgaggtcatggagg 41
          ||||||||||||| | ||||||| |||||||||||||||
Sbjct: 2  aggttgagaggaatgttgtctggctcgaggtcatggagg 40



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 109 aaatgattctcggaccaggctccattcc 136
           ||||||||||||||||||||| ||||||
Sbjct: 105 aaatgattctcggaccaggcttcattcc 132




>48549_gma-miR166b:pmrd
          Length = 167

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 3  aggttgagaggaacgctgtctgggtcgaggtcatggagg 41
          ||||||||||||| | ||||||| |||||||||||||||
Sbjct: 14 aggttgagaggaatgttgtctggctcgaggtcatggagg 52



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 109 aaatgattctcggaccaggctccattcc 136
           ||||||||||||||||||||| ||||||
Sbjct: 119 aaatgattctcggaccaggcttcattcc 146




>46948_ath-miR166d:pmrd
          Length = 113

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 106 cctaaatgattctcggaccaggctccattcc 136
           |||||||||||||||||||||||| ||||||
Sbjct: 75  cctaaatgattctcggaccaggcttcattcc 105




>46951_ath-miR166g:pmrd
          Length = 122

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 107 ctaaatgattctcggaccaggctccattcc 136
           ||||||||||||||||||||||| ||||||
Sbjct: 74  ctaaatgattctcggaccaggcttcattcc 103




>46947_ath-miR166c:pmrd
          Length = 139

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 106 cctaaatgattctcggaccaggctccattcc 136
           |||| ||||||||||||||||||| ||||||
Sbjct: 91  cctagatgattctcggaccaggcttcattcc 121