miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52433_ptc-miRf10611-akr:pmrd
Length = 106
Score = 103 bits (52), Expect = 2e-23
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 53 gtttggctgtcgatttctgaatcggcaacgacgcagtttttgctgtcggttt 104
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttggctgtcgatttctgaatcggcaacgacgcagtttttgctgtcggttt 52
>52432_ptc-miRf10610-akr:pmrd
Length = 106
Score = 103 bits (52), Expect = 2e-23
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 53 gtttggctgtcgatttctgaatcggcaacgacgcagtttttgctgtcggttt 104
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttggctgtcgatttctgaatcggcaacgacgcagtttttgctgtcggttt 52
>53476_ptc-miRf11654-akr:pmrd
Length = 114
Score = 95.6 bits (48), Expect = 6e-21
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 1 gaatcagcagcgacatagttttggctccgatttttgaatcaacaacgatatagtttggct 60
||||| |||||||||| |||||||||| ||||||| |||| || || ||||||||||||
Sbjct: 22 gaatcggcagcgacatggttttggctctgattttttaatcggcagcggtatagtttggct 81
Query: 61 gtcgatttctgaatcggcaacgacgcag 88
| ||||||||||||||||| ||||||||
Sbjct: 82 gccgatttctgaatcggcagcgacgcag 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 53 gtttggctgtcgatttctgaatcggcaacgac 84
|||||| |||||||||||||||||||| ||||
Sbjct: 4 gtttggttgtcgatttctgaatcggcagcgac 35
>52192_ptc-miRf10370-akr:pmrd
Length = 112
Score = 95.6 bits (48), Expect = 6e-21
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 1 gaatcagcagcgacatagttttggctccgatttttgaatcaacaacgatatagtttggct 60
||||| |||||||||| |||||||||| ||||||| |||| || || ||||||||||||
Sbjct: 21 gaatcggcagcgacatggttttggctctgattttttaatcggcagcggtatagtttggct 80
Query: 61 gtcgatttctgaatcggcaacgacgcag 88
| ||||||||||||||||| ||||||||
Sbjct: 81 gccgatttctgaatcggcagcgacgcag 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 53 gtttggctgtcgatttctgaatcggcaacgac 84
|||||| |||||||||||||||||||| ||||
Sbjct: 3 gtttggttgtcgatttctgaatcggcagcgac 34
>54228_ptc-miRf12406-akr:pmrd
Length = 80
Score = 61.9 bits (31), Expect = 8e-11
Identities = 56/62 (90%), Gaps = 3/62 (4%)
Strand = Plus / Minus
Query: 19 ttttggct-ccgatttttgaatcaacaacgatatagttt--ggctgtcgatttctgaatc 75
|||||||| |||||||||||||| ||||||| | ||||| |||||||||||||||||||
Sbjct: 75 ttttggctaccgatttttgaatcgacaacgacaaagtttttggctgtcgatttctgaatc 16
Query: 76 gg 77
||
Sbjct: 15 gg 14
>53583_ptc-miRf11761-akr:pmrd
Length = 80
Score = 61.9 bits (31), Expect = 8e-11
Identities = 56/62 (90%), Gaps = 3/62 (4%)
Strand = Plus / Minus
Query: 19 ttttggct-ccgatttttgaatcaacaacgatatagttt--ggctgtcgatttctgaatc 75
|||||||| |||||||||||||| ||||||| | ||||| |||||||||||||||||||
Sbjct: 75 ttttggctaccgatttttgaatcgacaacgacaaagtttttggctgtcgatttctgaatc 16
Query: 76 gg 77
||
Sbjct: 15 gg 14
>54342_ptc-miRf12520-akr:pmrd
Length = 180
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgacgcagttttt 93
|||||||| ||||||||||||||||| || ||||||||||
Sbjct: 73 tttggctgccgatttctgaatcggcagcgccgcagttttt 112
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 tgtcgatttctgaatcggcaacgac 84
|||| ||||||||||||||||||||
Sbjct: 116 tgtcaatttctgaatcggcaacgac 140
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 tgtcgatttctgaatcggca 79
||||||||||||||||||||
Sbjct: 42 tgtcgatttctgaatcggca 61
>52963_ptc-miRf11141-akr:pmrd
Length = 107
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagttttt 93
|||||||||||||| ||||||| |||||||||||||
Sbjct: 43 gctgtcgatttctgcatcggcagcgacgcagttttt 78
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttgctgtcg 100
|||| ||||||||| ||||||| |||||||||||| |||||||
Sbjct: 7 gctgccgatttctgcatcggcagcgacgcagttttcgctgtcg 49
>54169_ptc-miRf12347-akr:pmrd
Length = 126
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 59 ctgtcgatttctgaatcggcaacgacgcagttttt 93
||||||||||||||||||||| ||| |||||||||
Sbjct: 5 ctgtcgatttctgaatcggcagcgatgcagttttt 39
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggca 79
||||||||||||||||||||||
Sbjct: 101 gctgtcgatttctgaatcggca 122
>52568_ptc-miRf10746-akr:pmrd
Length = 170
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 52 agtttggctgtcgatttctgaatcggcaacgacgcagtttttg 94
||||||||||| |||||||||||||||| |||| ||||||||
Sbjct: 102 agtttggctgttgatttctgaatcggcagcgacaaagtttttg 144
>52291_ptc-miRf10469-akr:pmrd
Length = 180
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgacgcagtttt 92
||||||| ||||||||||||||||| ||||||||||||
Sbjct: 75 tttggctaccgatttctgaatcggcagcgacgcagtttt 113
>52004_ptc-miRf10182-akr:pmrd
Length = 172
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgacgcagtttt 92
|||||||| ||||||||| ||||||| ||||||||||||
Sbjct: 107 tttggctgccgatttctgcatcggcagcgacgcagtttt 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttgctg 97
|||| ||||||||| |||||| |||||||||||| ||||
Sbjct: 39 gctgccgatttctgcatcggcggcgacgcagttttcgctg 78
>53757_ptc-miRf11935-akr:pmrd
Length = 140
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggca 79
||||||||||||||||||||||||||
Sbjct: 4 tttggctgtcgatttctgaatcggca 29
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 agtttggctgtcgatttctgaatcggca 79
||||| ||||||||||||||||||||||
Sbjct: 108 agttttgctgtcgatttctgaatcggca 135
>53324_ptc-miRf11502-akr:pmrd
Length = 151
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggca 79
||||||||||||||||||||||||||
Sbjct: 7 tttggctgtcgatttctgaatcggca 32
Score = 52.0 bits (26), Expect = 8e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 52 agtttggctgtcgatttctgaatcggcaacgacgcagtttttgctg 97
|||||||||| |||||| | |||||||| ||||||||||||||||
Sbjct: 40 agtttggctgccgatttataaatcggcattgacgcagtttttgctg 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 agtttggctgtcgatttctgaatcggca 79
||||| ||||||||||||||||||||||
Sbjct: 111 agttttgctgtcgatttctgaatcggca 138
>53074_ptc-miRf11252-akr:pmrd
Length = 75
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 50 atagtttggctgtcgatttctgaatcggca 79
|||||||||||| |||||||||||||||||
Sbjct: 1 atagtttggctgccgatttctgaatcggca 30
>52782_ptc-miRf10960-akr:pmrd
Length = 107
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgacgcagtttttgc 95
|||||||| ||||||||||||| || |||||||||||||||
Sbjct: 4 tttggctgctgatttctgaatcgacagcgacgcagtttttgc 45
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/45 (88%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgacgcagtttttgctgt 98
|||| |||||||||||||||||| |||| | |||||||||||||
Sbjct: 41 tttgcctgtcgatttctgaatcgacaac--cacagtttttgctgt 83
>52435_ptc-miRf10613-akr:pmrd
Length = 133
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 57 ggctgtcgatttctgaatcggcaacgacgcagtttttg 94
|||||| |||||||||||||| |||||| |||||||||
Sbjct: 1 ggctgttgatttctgaatcggtaacgacacagtttttg 38
>52226_ptc-miRf10404-akr:pmrd
Length = 101
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggca 79
||||||||||||||||||||||||||
Sbjct: 72 tttggctgtcgatttctgaatcggca 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttg 94
|||| ||||||||||||||||| |||| || ||||||
Sbjct: 3 gctgccgatttctgaatcggcagcgacacactttttg 39
>53936_ptc-miRf12114-akr:pmrd
Length = 83
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgacgcagtttttg 94
|||||||| ||||||||||||||||||| ||||||||||
Sbjct: 6 tttggctgctgatttctgaatcggcaacggtgcagtttttg 46
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggca 79
|||||||| |||||||||||||||||
Sbjct: 43 tttggctgccgatttctgaatcggca 68
>53814_ptc-miRf11992-akr:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttg 94
|||||||||||||||||||||| |||| || ||||||
Sbjct: 5 gctgtcgatttctgaatcggcagcgacacaatttttg 41
>53813_ptc-miRf11991-akr:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttg 94
|||||||||||||||||||||| |||| || ||||||
Sbjct: 5 gctgtcgatttctgaatcggcagcgacacaatttttg 41
>52356_ptc-miRf10534-akr:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttg 94
|||||||||||||||||||||| |||| || ||||||
Sbjct: 5 gctgtcgatttctgaatcggcagcgacacaatttttg 41
>53402_ptc-miRf11580-akr:pmrd
Length = 113
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 agtttggctgtcgatttctgaatcggca 79
||||||||||||||||| ||||||||||
Sbjct: 3 agtttggctgtcgatttatgaatcggca 30
>53335_ptc-miRf11513-akr:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttgctg 97
|||| ||||||||| ||||||| |||||||||||| ||||
Sbjct: 7 gctgccgatttctggatcggcagcgacgcagttttcgctg 46
>53334_ptc-miRf11512-akr:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttgctg 97
|||| ||||||||| ||||||| |||||||||||| ||||
Sbjct: 7 gctgccgatttctggatcggcagcgacgcagttttcgctg 46
>53333_ptc-miRf11511-akr:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttgctg 97
|||| ||||||||| ||||||| |||||||||||| ||||
Sbjct: 7 gctgccgatttctggatcggcagcgacgcagttttcgctg 46
>53818_ptc-miRf11996-akr:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 gtttggctgtcgatttctgaatcggca 79
|||| ||||||||||||||||||||||
Sbjct: 1 gttttgctgtcgatttctgaatcggca 27
>53817_ptc-miRf11995-akr:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 gtttggctgtcgatttctgaatcggca 79
|||| ||||||||||||||||||||||
Sbjct: 1 gttttgctgtcgatttctgaatcggca 27
>53457_ptc-miRf11635-akr:pmrd
Length = 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 63 cgatttctgaatcggcaacgacgcagtttttgctg 97
||||||||| ||||||| |||||||||||| ||||
Sbjct: 15 cgatttctgtatcggcagcgacgcagttttcgctg 49
>53403_ptc-miRf11581-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgac 84
||||||||||||| |||||||||||| ||||
Sbjct: 75 tttggctgtcgatgtctgaatcggcatcgac 105
>53010_ptc-miRf11188-akr:pmrd
Length = 112
Score = 46.1 bits (23), Expect = 5e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttgctgtcggttt 104
|||| |||||| |||||||| | ||||||||||||| |||||||||
Sbjct: 45 gctgccgatttttgaatcggtagcgacgcagtttttattgtcggttt 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 ctgtcgatttctgaatcggcaa 80
||||||||||||||||||||||
Sbjct: 11 ctgtcgatttctgaatcggcaa 32
>52562_ptc-miRf10740-akr:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgac 84
|||||||| ||||||||||||||||| ||||
Sbjct: 70 tttggctgccgatttctgaatcggcagcgac 100
>52403_ptc-miRf10581-akr:pmrd
Length = 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgac 84
||||||||||||||| |||||||||| ||||
Sbjct: 3 tttggctgtcgatttttgaatcggcagcgac 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 55 ttggctgtcgatttctgaatcggcaacgacgcagtt 90
|||||||||||||||| |||| || ||||||||||
Sbjct: 63 ttggctgtcgatttctaaatcaacagcgacgcagtt 98
>52402_ptc-miRf10580-akr:pmrd
Length = 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgac 84
||||||||||||||| |||||||||| ||||
Sbjct: 3 tttggctgtcgatttttgaatcggcagcgac 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 55 ttggctgtcgatttctgaatcggcaacgacgcagtt 90
|||||||||||||||| |||| || ||||||||||
Sbjct: 63 ttggctgtcgatttctaaatcaacagcgacgcagtt 98
>53816_ptc-miRf11994-akr:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggca 79
||||||||||||||||||||||
Sbjct: 3 gctgtcgatttctgaatcggca 24
>53815_ptc-miRf11993-akr:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggca 79
||||||||||||||||||||||
Sbjct: 3 gctgtcgatttctgaatcggca 24
>53723_ptc-miRf11901-akr:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 ctgtcgatttctgaatcggcaacgac 84
|||||||||||||||| |||||||||
Sbjct: 49 ctgtcgatttctgaattggcaacgac 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 56 tggctgtcgatttctgaatcggca 79
|||||| |||||||||||||||||
Sbjct: 9 tggctgccgatttctgaatcggca 32
>53192_ptc-miRf11370-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggca 79
|||||||| |||||||||||||||||
Sbjct: 73 tttggctgccgatttctgaatcggca 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 tgtcgatttctgaatcggca 79
||||||||||||||||||||
Sbjct: 42 tgtcgatttctgaatcggca 61
>53081_ptc-miRf11259-akr:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tgtcgatttctgaatcggcaacgacg 85
|||||||||||||||||||| |||||
Sbjct: 88 tgtcgatttctgaatcggcagcgacg 113
>53080_ptc-miRf11258-akr:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tgtcgatttctgaatcggcaacgacg 85
|||||||||||||||||||| |||||
Sbjct: 92 tgtcgatttctgaatcggcagcgacg 117
>53078_ptc-miRf11256-akr:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 55 ttggctgtcgatttctgaatcg 76
||||||||||||||||||||||
Sbjct: 63 ttggctgtcgatttctgaatcg 42
>53009_ptc-miRf11187-akr:pmrd
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 65 atttctgaatcggcaacgacgcagtttttgctgt 98
|||| |||||||||||||||| |||| |||||||
Sbjct: 81 atttttgaatcggcaacgacgtagttattgctgt 114
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtt 90
|||||||||||||| ||||||| | ||||||||
Sbjct: 38 gctgtcgatttctggatcggcagcaacgcagtt 70
>52437_ptc-miRf10615-akr:pmrd
Length = 147
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 cgatttctgaatcggcaacgac 84
||||||||||||||||||||||
Sbjct: 12 cgatttctgaatcggcaacgac 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 64 gatttctgaatcggcaacgacgcagttt 91
||||||||||| |||| |||||||||||
Sbjct: 50 gatttctgaattggcagcgacgcagttt 77
>52436_ptc-miRf10614-akr:pmrd
Length = 147
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 cgatttctgaatcggcaacgac 84
||||||||||||||||||||||
Sbjct: 12 cgatttctgaatcggcaacgac 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 64 gatttctgaatcggcaacgacgcagttt 91
||||||||||| |||| |||||||||||
Sbjct: 50 gatttctgaattggcagcgacgcagttt 77
>52027_ptc-miRf10205-akr:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 63 cgatttctgaatcggcaacgac 84
||||||||||||||||||||||
Sbjct: 135 cgatttctgaatcggcaacgac 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 64 gatttctgaatcggcaacgacgcagttt 91
||||||||||| |||| |||||||||||
Sbjct: 97 gatttctgaattggcagcgacgcagttt 70
>52025_ptc-miRf10203-akr:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tgtcgatttctgaatcggcaacgacg 85
|||||||||||||||||||| |||||
Sbjct: 88 tgtcgatttctgaatcggcagcgacg 113
>52024_ptc-miRf10202-akr:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tgtcgatttctgaatcggcaacgacg 85
|||||||||||||||||||| |||||
Sbjct: 88 tgtcgatttctgaatcggcagcgacg 113
>51979_ptc-miRf10157-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggca 79
||||| ||||||||||||||||||||
Sbjct: 36 tttggttgtcgatttctgaatcggca 61
>51957_ptc-miRf10135-akr:pmrd
Length = 277
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagttt 91
|||| ||||||||| ||||||| |||||||||||
Sbjct: 244 gctgccgatttctgcatcggcagcgacgcagttt 277
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 65 atttctgaatcggcaacgacgcagtttttgctg 97
||||||| ||||| | |||||||||||||||||
Sbjct: 215 atttctggatcggtagcgacgcagtttttgctg 247
>51878_ptc-miRf10056-akr:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 atagtttggctgtcgatttctgaatcggca 79
||||||||| |||||||| |||||||||||
Sbjct: 67 atagtttggttgtcgattgctgaatcggca 96
>54331_ptc-miRf12509-akr:pmrd
Length = 71
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 55 ttggctgtcgatttctgaatcggca 79
|||||| ||||||||||||||||||
Sbjct: 5 ttggctatcgatttctgaatcggca 29
>54144_ptc-miRf12322-akr:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 53 gtttggctgtcgatttctgaatcggcaacgacgcagttttt 93
|||| |||| |||||| |||||||||| | |||||||||||
Sbjct: 4 gttttgctgccgatttttgaatcggcagcaacgcagttttt 44
>54143_ptc-miRf12321-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 53 gtttggctgtcgatttctgaatcggcaacgacgcagttttt 93
|||| |||| |||||| |||||||||| | |||||||||||
Sbjct: 3 gttttgctgccgatttttgaatcggcagcaacgcagttttt 43
>53692_ptc-miRf11870-akr:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtt 90
|||||||||||||||||||| | ||| ||||||
Sbjct: 13 gctgtcgatttctgaatcggtagcgatgcagtt 45
>53351_ptc-miRf11529-akr:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 aatcagcagcgacatagtttt 22
|||||||||||||||||||||
Sbjct: 32 aatcagcagcgacatagtttt 12
>52968_ptc-miRf11146-akr:pmrd
Length = 112
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 55 ttggctgtcgatttctgaatcggca 79
|||| ||||||||||||||||||||
Sbjct: 5 ttggttgtcgatttctgaatcggca 29
>52292_ptc-miRf10470-akr:pmrd
Length = 71
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgacgc 86
||||||| ||||||||||||||||| ||||||
Sbjct: 39 tttggctaccgatttctgaatcggcagcgacgc 71
>52201_ptc-miRf10379-akr:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 72 aatcggcaacgacgcagtttttgctgtcg 100
|||||||| |||||||||||| |||||||
Sbjct: 1 aatcggcagcgacgcagttttcgctgtcg 29
>52103_ptc-miRf10281-akr:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 73 atcggcaacgacgcagtttttgctg 97
||||||| |||||||||||||||||
Sbjct: 102 atcggcagcgacgcagtttttgctg 78
>51958_ptc-miRf10136-akr:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 55 ttggctgtcgatttctgaatcggca 79
|||| ||||||||||||||||||||
Sbjct: 85 ttggttgtcgatttctgaatcggca 109
>54171_ptc-miRf12349-akr:pmrd
Length = 62
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 tgtcgatttctgaatcggca 79
||||||||||||||||||||
Sbjct: 5 tgtcgatttctgaatcggca 24
>53958_ptc-miRf12136-akr:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttgctg 97
|||| ||||||||| |||||| |||||||||||| ||||
Sbjct: 19 gctgccgatttctgcatcggcggcgacgcagttttcgctg 58
>53593_ptc-miRf11771-akr:pmrd
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 63 cgatttctgaatcggcaacg 82
||||||||||||||||||||
Sbjct: 27 cgatttctgaatcggcaacg 8
>53546_ptc-miRf11724-akr:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 56 tggctgtcgatttctgaatcggcaacgacgcagttt 91
|||||| |||| |||||||||||| |||| ||||||
Sbjct: 40 tggctgccgatctctgaatcggcagcgacacagttt 75
>53323_ptc-miRf11501-akr:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 58 gctgtcgatttctgaatcggcaacgacgcagtttttgctg 97
|||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 21 gctgccgatttcttgatcggcagcgacgcagttttggctg 60
>52970_ptc-miRf11148-akr:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 65 atttctgaatcggcaacgacgcagtttt 92
|||||||||||||||||| || ||||||
Sbjct: 16 atttctgaatcggcaacgccgtagtttt 43
>52401_ptc-miRf10579-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcggcaacgacgcagtttttgctg 97
|||||||| |||||| ||||||| || | | |||||||||||||
Sbjct: 36 tttggctgccgatttttgaatcgacagctatgcagtttttgctg 79
>52380_ptc-miRf10558-akr:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 63 cgatttctgaatcggcaacgacgcagtt 90
||||||||||||||||| |||| |||||
Sbjct: 8 cgatttctgaatcggcagcgacacagtt 35
>52297_ptc-miRf10475-akr:pmrd
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 tttggctgtcgatttctgaatcgg 77
||||||||| ||||||||||||||
Sbjct: 103 tttggctgttgatttctgaatcgg 126
>52146_ptc-miRf10324-akr:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 tcggcaacgacgcagtttttgctg 97
|||||||||| |||||||||||||
Sbjct: 19 tcggcaacgatgcagtttttgctg 42
