miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53719_ptc-miRf11897-akr:pmrd
Length = 119
Score = 218 bits (110), Expect = 6e-58
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 64
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 114
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaac 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gttgcgcagcgaaattctgtttcgctgccgcaactgaac 119
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 73 gtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtgttgcgcagcgaaattctgtttcgctgccgcaac 38
>52552_ptc-miRf10730-akr:pmrd
Length = 110
Score = 218 bits (110), Expect = 6e-58
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
>52445_ptc-miRf10623-akr:pmrd
Length = 110
Score = 218 bits (110), Expect = 6e-58
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
>52308_ptc-miRf10486-akr:pmrd
Length = 110
Score = 218 bits (110), Expect = 6e-58
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
>54271_ptc-miRf12449-akr:pmrd
Length = 110
Score = 210 bits (106), Expect = 2e-55
Identities = 109/110 (99%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcgcaacgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
>52611_ptc-miRf10789-akr:pmrd
Length = 110
Score = 210 bits (106), Expect = 2e-55
Identities = 109/110 (99%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctactgcagcgaattaatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
>52533_ptc-miRf10711-akr:pmrd
Length = 110
Score = 210 bits (106), Expect = 2e-55
Identities = 109/110 (99%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cactgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
>54325_ptc-miRf12503-akr:pmrd
Length = 119
Score = 206 bits (104), Expect = 2e-54
Identities = 107/108 (99%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 64
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgca 108
||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 65 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgacgca 112
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 73 gtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtgttgcgcagcgaaattctgtttcgctgccgcaac 38
Score = 61.9 bits (31), Expect = 9e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaac 39
||||||||||||||||||||||||||| |||| ||||||
Sbjct: 81 gttgcgcagcgaaattctgtttcgctgacgcacctgaac 119
>54263_ptc-miRf12441-akr:pmrd
Length = 119
Score = 202 bits (102), Expect = 4e-53
Identities = 108/110 (98%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 5 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgatttgatatt 64
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 114
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaac 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gttgcgcagcgaaattctgtttcgctgccgcaactgaac 119
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 73 gtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtgttgcgcagcgaaattctgtttcgctgccgcaac 38
>54200_ptc-miRf12378-akr:pmrd
Length = 119
Score = 202 bits (102), Expect = 4e-53
Identities = 108/110 (98%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgatttaatatt 64
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 65 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgacgcaac 114
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 73 gtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtgttgcgcagcgaaattctgtttcgctgccgcaac 38
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaac 39
||||||||||||||||||||||||||| |||||||||||
Sbjct: 81 gttgcgcagcgaaattctgtttcgctgacgcaactgaac 119
>52623_ptc-miRf10801-akr:pmrd
Length = 110
Score = 202 bits (102), Expect = 4e-53
Identities = 108/110 (98%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctcctgcagcgaattgatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
>52532_ptc-miRf10710-akr:pmrd
Length = 110
Score = 202 bits (102), Expect = 4e-53
Identities = 108/110 (98%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgagttgatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
>52141_ptc-miRf10319-akr:pmrd
Length = 110
Score = 202 bits (102), Expect = 4e-53
Identities = 108/110 (98%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattgatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61 cgctgccgatttgtgtgttgcgcagtgaaattctgtttcgctgccgcaac 110
>52579_ptc-miRf10757-akr:pmrd
Length = 110
Score = 194 bits (98), Expect = 9e-51
Identities = 107/110 (97%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgtcgcaactgaacctgctgcagcgatttaatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
|||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgttttgctgccgcaac 110
>52406_ptc-miRf10584-akr:pmrd
Length = 110
Score = 194 bits (98), Expect = 9e-51
Identities = 107/110 (97%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
|||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||
Sbjct: 1 gttgcgcagcgaaattctttttcgctgccgcaactgaacctcctgcagcgaattgatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
>53515_ptc-miRf11693-akr:pmrd
Length = 118
Score = 186 bits (94), Expect = 2e-48
Identities = 107/110 (97%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||
Sbjct: 5 gttgcgcagcgaaattctgtttcgctgcc-caactgaacctgctgcagcgatttgatatt 63
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 113
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaac 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 80 gttgcgcagcgaaattctgtttcgctgccgcaactgaac 118
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 73 gtgtgttgcgcagcgaaattctgtttcgctgcc 105
|||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtgttgcgcagcgaaattctgtttcgctgcc 33
>52354_ptc-miRf10532-akr:pmrd
Length = 110
Score = 178 bits (90), Expect = 6e-46
Identities = 105/110 (95%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||| ||||||||||||| ||||||||| || |||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgacgcaactgaacctcctgcagcgatttgatatt 60
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctgccgaattgtgtgttgcgcagcgaaattctgtttcgctgccgcaac 110
>52642_ptc-miRf10820-akr:pmrd
Length = 102
Score = 135 bits (68), Expect = 7e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 43 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
Query: 103 gccgcaac 110
||||||||
Sbjct: 61 gccgcaac 68
Score = 131 bits (66), Expect = 1e-31
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
Query: 61 cgctgc 66
||||||
Sbjct: 95 cgctgc 100
>54315_ptc-miRf12493-akr:pmrd
Length = 83
Score = 79.8 bits (40), Expect = 4e-16
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 43 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
||||||||||||| |||||||||||| |||||||||| ||||||||||| || ||||||
Sbjct: 11 ctgcagcgaattagcattcgctgccgaattgtgtgttgtgcagcgaaattgtgattcgct 70
Query: 103 gccg 106
||||
Sbjct: 71 gccg 74
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactga 37
|||| ||||||||||| || |||||||||| ||||||
Sbjct: 45 gttgtgcagcgaaattgtgattcgctgccgaaactga 81
>53975_ptc-miRf12153-akr:pmrd
Length = 75
Score = 67.9 bits (34), Expect = 1e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 45 gcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgc 104
||||||||||| |||||||||||| ||||||||| ||||||||||| || ||||||||
Sbjct: 9 gcagcgaattagcattcgctgccgaattgtgtgttctgcagcgaaattgtgattcgctgc 68
Query: 105 cg 106
||
Sbjct: 69 cg 70
>54190_ptc-miRf12368-akr:pmrd
Length = 143
Score = 63.9 bits (32), Expect = 2e-11
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 43 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
||||||||||||| |||||||||||| ||||||||| |||||||| || || ||||||
Sbjct: 123 ctgcagcgaattagcattcgctgccgaattgtgtgttctgcagcgaagttgtgattcgct 64
Query: 103 gccg 106
||||
Sbjct: 63 gccg 60
>54011_ptc-miRf12189-akr:pmrd
Length = 158
Score = 63.9 bits (32), Expect = 2e-11
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 43 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
||||||||||||| |||||||| ||| |||||||||| ||||||||| | || ||||||
Sbjct: 11 ctgcagcgaattagcattcgctgtcgaattgtgtgttgtgcagcgaaactgtgattcgct 70
Query: 103 gccg 106
||||
Sbjct: 71 gccg 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 86/106 (81%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
|||| ||||||||| | || |||||||||| ||||| | |||||||| ||||| |||
Sbjct: 45 gttgtgcagcgaaactgtgattcgctgccgaaactgcgtcggctgcagcaaattagcatt 104
Query: 61 cgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgccg 106
||||||||| ||||||| |||||||| || || ||||||||||
Sbjct: 105 cgctgccga-aactgtgttgtgcagcgaatttgtgattcgctgccg 149
>52150_ptc-miRf10328-akr:pmrd
Length = 99
Score = 61.9 bits (31), Expect = 9e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 58 attcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgc 104
|||||||||||| |||||||||| ||||||||| |||| ||||||||
Sbjct: 53 attcgctgccgaattgtgtgttgtgcagcgaaactctgattcgctgc 99
>54055_ptc-miRf12233-akr:pmrd
Length = 113
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
|||| ||||||||| |||| |||||||||| ||||| | |||||||||||||| |||
Sbjct: 3 gttgtgcagcgaaactctgattcgctgccgaaactgtgtcagctgcagcgaattagcatt 62
Query: 61 cgctgccga 69
|||||||||
Sbjct: 63 cgctgccga 71
>52355_ptc-miRf10533-akr:pmrd
Length = 112
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
|||| ||||||||| |||| ||| |||||| |||||| || ||||||||||||| |||
Sbjct: 3 gttgtgcagcgaaactctgattcactgccgaaactgagtcttctgcagcgaattagcatt 62
Query: 61 cgctgccga 69
|||||||||
Sbjct: 63 cgctgccga 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 21 ttcgctgccgcaactgaacctgctgcagcgaattaatattcgctgccga 69
|||||||||| |||||| || ||||||||||||| ||||||||||||
Sbjct: 61 ttcgctgccgaaactgagtcttctgcagcgaattagcattcgctgccga 109
>54142_ptc-miRf12320-akr:pmrd
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 45 gcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgc 104
||||||||||| |||||||||| | ||||||||| |||||||| || || ||||||||
Sbjct: 9 gcagcgaattagcattcgctgccaaattgtgtgttctgcagcgaatttgtgattcgctgc 68
Query: 105 c 105
|
Sbjct: 69 c 69
>52207_ptc-miRf10385-akr:pmrd
Length = 112
Score = 50.1 bits (25), Expect = 3e-07
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
|||| ||||||||| |||| ||| |||||| ||||| | |||||||||||||| |||
Sbjct: 3 gttgtgcagcgaaactctgattcactgccgaaactgtgtcagctgcagcgaattagcatt 62
Query: 61 cgctgccga 69
|||||||||
Sbjct: 63 cgctgccga 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 21 ttcgctgccgcaactgaacctgctgcagcgaattaatattcgctgccga 69
|||||||||| |||||| || ||||||||||||| ||||||||||||
Sbjct: 61 ttcgctgccgaaactgagtcttctgcagcgaattagcattcgctgccga 109
>54030_ptc-miRf12208-akr:pmrd
Length = 79
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 44 tgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaa 89
|||||||||||| ||||||||| || ||||||||| ||||||||
Sbjct: 10 tgcagcgaattagcattcgctgctgaattgtgtgttctgcagcgaa 55
>53970_ptc-miRf12148-akr:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 6 gcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatattcg 62
||||||||||| || |||||||||| ||||| | ||||||| ||||||| |||||
Sbjct: 6 gcagcgaaattgtgattcgctgccgaaactgtgtcggctgcagtgaattaacattcg 62
>53387_ptc-miRf11565-akr:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 6 gcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatattcg 62
||||||||||| || |||||||||| ||||| | ||||||| ||||||| |||||
Sbjct: 6 gcagcgaaattgtgattcgctgccgaaactgtgtcggctgcagtgaattaacattcg 62
>52564_ptc-miRf10742-akr:pmrd
Length = 112
Score = 42.1 bits (21), Expect = 8e-05
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 42 gctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgc 101
||||||| ||||||| | ||| |||||| ||| |||| ||||||||||| || |||||
Sbjct: 3 gctgcagtgaattaacagtcgttgccgaattggatgttcagcagcgaaattgtgattcgc 62
Query: 102 tgccg 106
|||||
Sbjct: 63 tgccg 67
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 6 gcagcgaaattctgtttcgctgccgcaactga 37
||||||||||| || |||||||||| ||||||
Sbjct: 43 gcagcgaaattgtgattcgctgccgaaactga 74
>54063_ptc-miRf12241-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 43 ctgcagcgaattaatattcgctgccgatttgtgtgt 78
||||||||||| | | ||||||||||| ||||||||
Sbjct: 66 ctgcagcgaatgagttttcgctgccgaattgtgtgt 31
>52175_ptc-miRf10353-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 44 tgcagcgaattaatattcgctgcc 67
||||||||||||| ||||||||||
Sbjct: 80 tgcagcgaattaacattcgctgcc 103
>52174_ptc-miRf10352-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 44 tgcagcgaattaatattcgctgcc 67
||||||||||||| ||||||||||
Sbjct: 80 tgcagcgaattaacattcgctgcc 103
