miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52325_ptc-miRf10503-akr:pmrd
Length = 87
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaatcata 60
Query: 61 ccgacggaacacgtccgtcggtaaaac 87
|||||||||||||||||||||||||||
Sbjct: 61 ccgacggaacacgtccgtcggtaaaac 87
>52330_ptc-miRf10508-akr:pmrd
Length = 87
Score = 125 bits (63), Expect = 5e-30
Identities = 78/83 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 1 gttttaccgacggactcattccgtcggtgacagcaatgacatccgtcggtgaaaataata 60
Query: 61 ccgacggaacacgtccgtcggta 83
|||||||||||||||||||||||
Sbjct: 61 ccgacggaacacgtccgtcggta 83
>54335_ptc-miRf12513-akr:pmrd
Length = 99
Score = 119 bits (60), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 40
Query: 61 ccgacgga 68
||||||||
Sbjct: 39 ccgacgga 32
>52858_ptc-miRf11036-akr:pmrd
Length = 99
Score = 119 bits (60), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 40
Query: 61 ccgacgga 68
||||||||
Sbjct: 39 ccgacgga 32
>54297_ptc-miRf12475-akr:pmrd
Length = 104
Score = 117 bits (59), Expect = 1e-27
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 101 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 42
Query: 61 ccgacgg 67
|||||||
Sbjct: 41 ccgacgg 35
>53882_ptc-miRf12060-akr:pmrd
Length = 104
Score = 117 bits (59), Expect = 1e-27
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 101 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 42
Query: 61 ccgacgg 67
|||||||
Sbjct: 41 ccgacgg 35
>53526_ptc-miRf11704-akr:pmrd
Length = 98
Score = 117 bits (59), Expect = 1e-27
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
Query: 61 ccgacgg 67
|||||||
Sbjct: 61 ccgacgg 67
>53027_ptc-miRf11205-akr:pmrd
Length = 98
Score = 117 bits (59), Expect = 1e-27
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
Query: 61 ccgacgg 67
|||||||
Sbjct: 61 ccgacgg 67
>53681_ptc-miRf11859-akr:pmrd
Length = 99
Score = 111 bits (56), Expect = 8e-26
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 99 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaacaata 40
Query: 61 ccgacgga 68
||||||||
Sbjct: 39 ccgacgga 32
>53487_ptc-miRf11665-akr:pmrd
Length = 99
Score = 111 bits (56), Expect = 8e-26
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 99 gttttaccgacggattcattccgtcggtgacagcaatgaaatccgtcggtgaaaataata 40
Query: 61 ccgacgga 68
||||||||
Sbjct: 39 ccgacgga 32
>53326_ptc-miRf11504-akr:pmrd
Length = 93
Score = 111 bits (56), Expect = 8e-26
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 4 ttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacataccg 63
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 93 ttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaataccg 34
Query: 64 acgg 67
||||
Sbjct: 33 acgg 30
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 4 ttaccgacggattaattccgtcggtga 30
|||||||||||| | ||||||||||||
Sbjct: 1 ttaccgacggatcacttccgtcggtga 27
>52619_ptc-miRf10797-akr:pmrd
Length = 99
Score = 111 bits (56), Expect = 8e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 gttttaccgacggattcattccgtcggtgacagcaatgaaatccgtcggtgaaaataata 60
Query: 61 ccgacgga 68
||||||||
Sbjct: 61 ccgacgga 68
>52376_ptc-miRf10554-akr:pmrd
Length = 99
Score = 111 bits (56), Expect = 8e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
Query: 61 ccgacgga 68
|||||||
Sbjct: 61 tcgacgga 68
>53918_ptc-miRf12096-akr:pmrd
Length = 99
Score = 105 bits (53), Expect = 5e-24
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgttggtgaaaacaata 40
Query: 61 ccgac 65
|||||
Sbjct: 39 ccgac 35
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtga 30
||||||||||||||| | ||||||||||||
Sbjct: 1 gttttaccgacggatcacttccgtcggtga 30
>53620_ptc-miRf11798-akr:pmrd
Length = 98
Score = 105 bits (53), Expect = 5e-24
Identities = 63/65 (96%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 98 gttttaccgacggattaattccgt-ggtgacagcaatgaaatccgtcggtgaaaaccata 40
Query: 61 ccgac 65
|||||
Sbjct: 39 ccgac 35
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 ataccgacggaacacgtccgtcggt 82
||||||||||| |||||||||||||
Sbjct: 4 ataccgacggatcacgtccgtcggt 28
>54061_ptc-miRf12239-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||
Sbjct: 101 gttttaccgacggattaattccatcggtgaaagcaatgaaatccgtcggtgaaaacaata 42
Query: 61 ccgacgga 68
||||||||
Sbjct: 41 ccgacgga 34
>53345_ptc-miRf11523-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 101 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaata 42
Query: 61 ccgacgga 68
||||||||
Sbjct: 41 ccgacgga 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 taccgacggaacacgtccgtcggt 82
|||||||||||||| |||||||||
Sbjct: 7 taccgacggaacacttccgtcggt 30
>53270_ptc-miRf11448-akr:pmrd
Length = 99
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||
Sbjct: 1 gttttaccgacggattaattccgtcggtgatagcaatgaactccgtcggtgaaaacaata 60
Query: 61 ccgacgga 68
||||||||
Sbjct: 61 ccgacgga 68
>53262_ptc-miRf11440-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 101 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaata 42
Query: 61 ccgacgga 68
||||||||
Sbjct: 41 ccgacgga 34
>53194_ptc-miRf11372-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 101 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaata 42
Query: 61 ccgacgga 68
||||||||
Sbjct: 41 ccgacgga 34
>53106_ptc-miRf11284-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 101 gttttactgacggattaattccgtcggtgacagcaatgaaatctgtcggtgaaaacaata 42
Query: 61 ccgacgga 68
||||||||
Sbjct: 41 ccgacgga 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3 tttaccgacggattaattccgtcggtga 30
||||||||||||| | ||||||||||||
Sbjct: 5 tttaccgacggatcacttccgtcggtga 32
>52831_ptc-miRf11009-akr:pmrd
Length = 105
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||
Sbjct: 102 gttttaccgacggattaattccgtcggtgacaacaattaaatccgtcggtgaaaacaata 43
Query: 61 ccgacgga 68
||||||||
Sbjct: 42 ccgacgga 35
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3 tttaccgacggattaattccgtcggtga 30
||||||||||||| | ||||||||||||
Sbjct: 6 tttaccgacggatcacttccgtcggtga 33
>52673_ptc-miRf10851-akr:pmrd
Length = 99
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
Query: 61 ccgacgga 68
||||||||
Sbjct: 61 ccgacgga 68
>52483_ptc-miRf10661-akr:pmrd
Length = 99
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||| | |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gttttaccgacggactcattctgtcggtgacagcaatgaaatccgtcggtgaaaatcata 60
Query: 61 ccgacgga 68
||||||||
Sbjct: 61 ccgacgga 68
>52114_ptc-miRf10292-akr:pmrd
Length = 99
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||
Sbjct: 1 gttttaccgacggattaattccgtcggtgatagcaatgaactccgtcggtgaaaacaata 60
Query: 61 ccgacgga 68
||||||||
Sbjct: 61 ccgacgga 68
>54104_ptc-miRf12282-akr:pmrd
Length = 99
Score = 101 bits (51), Expect = 8e-23
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaa 55
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgcaatccgtcggtgaaaa 55
>53254_ptc-miRf11432-akr:pmrd
Length = 98
Score = 101 bits (51), Expect = 8e-23
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct: 1 gttttaccgacggactaattccgtcggtgacagcaatgcaatccgtcggtgaaacaaata 60
Query: 61 ccgacgg 67
|||||||
Sbjct: 61 ccgacgg 67
>52517_ptc-miRf10695-akr:pmrd
Length = 104
Score = 101 bits (51), Expect = 8e-23
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct: 101 gttttaccgacggactaattccgtcggtgacagcaatgcaatccgtcggtgaaacaaata 42
Query: 61 ccgacgg 67
|||||||
Sbjct: 41 ccgacgg 35
>52264_ptc-miRf10442-akr:pmrd
Length = 99
Score = 99.6 bits (50), Expect = 3e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcattgaaatccgtcggtaaaaacaata 60
Query: 61 ccgacg 66
||||||
Sbjct: 61 ccgacg 66
>51848_ptc-miRf10026-akr:pmrd
Length = 99
Score = 93.7 bits (47), Expect = 2e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| | |||
Sbjct: 1 gttttaccgacggattaattccgttggtgatagccatgaaatccgtcggtgaaagaaata 60
Query: 61 ccgacgg 67
|||||||
Sbjct: 61 ccgacgg 67
>53602_ptc-miRf11780-akr:pmrd
Length = 100
Score = 91.7 bits (46), Expect = 8e-20
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaa 54
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 2 gttttaccgacggactaattccgtcggtgacaggaatgaaatccgtcggtgaaa 55
>52912_ptc-miRf11090-akr:pmrd
Length = 99
Score = 89.7 bits (45), Expect = 3e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||| | |||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 1 gttttaccgacggaatcattccgtcggtgacagtaatgaaatccgtcggtgaaaataata 60
Query: 61 ccgacggaa 69
|| ||||||
Sbjct: 61 ccaacggaa 69
>52255_ptc-miRf10433-akr:pmrd
Length = 104
Score = 89.7 bits (45), Expect = 3e-19
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 3 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacatacc 62
|||||||||||| ||||||||||||||||| ||||||||||||||||||||| | ||||
Sbjct: 99 tttaccgacggactaattccgtcggtgacaacaatgaaatccgtcggtgaaataattacc 40
Query: 63 gacgg 67
|||||
Sbjct: 39 gacgg 35
>53644_ptc-miRf11822-akr:pmrd
Length = 91
Score = 87.7 bits (44), Expect = 1e-18
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacataccga 64
|||||||||| | ||||||||||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 91 taccgacggactcattccgtcggtgaaagcaatgcaatccgtcggtgaaaatcataccga 32
Query: 65 cgga 68
||||
Sbjct: 31 cgga 28
>52732_ptc-miRf10910-akr:pmrd
Length = 91
Score = 87.7 bits (44), Expect = 1e-18
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacataccga 64
|||||||||| | ||||||||||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 91 taccgacggactcattccgtcggtgaaagcaatgcaatccgtcggtgaaaatcataccga 32
Query: 65 cgga 68
||||
Sbjct: 31 cgga 28
>52088_ptc-miRf10266-akr:pmrd
Length = 99
Score = 85.7 bits (43), Expect = 5e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||||||||||||||||||| | ||||||||||||||||||| | |||
Sbjct: 1 gttttaccgacggattaattccgtcggtgataaacatgaaatccgtcggtgaaagaaata 60
Query: 61 ccgacgg 67
|||||||
Sbjct: 61 ccgacgg 67
>52480_ptc-miRf10658-akr:pmrd
Length = 107
Score = 83.8 bits (42), Expect = 2e-17
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaa 54
|||||||||||||| |||||||||||||||||| |||||| |||||||||||||
Sbjct: 103 gttttaccgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaa 50
>52071_ptc-miRf10249-akr:pmrd
Length = 105
Score = 83.8 bits (42), Expect = 2e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaa 54
|||||||||||||| |||||||||||||||||| |||||| |||||||||||||
Sbjct: 4 gttttaccgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaa 57
>52229_ptc-miRf10407-akr:pmrd
Length = 95
Score = 81.8 bits (41), Expect = 7e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 3 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacatacc 62
|||||||||| |||||||||||||||| ||| ||||||||||||||||||| | |||||
Sbjct: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
Query: 63 gacgg 67
|||||
Sbjct: 61 gacgg 65
>53438_ptc-miRf11616-akr:pmrd
Length = 99
Score = 79.8 bits (40), Expect = 3e-16
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||||||||| || ||||||||||||| |||||| || |||||||||||||| |||
Sbjct: 99 gttttaccgacgggttcattccgtcggtgatagcaattaactccgtcggtgaaaacaata 40
Query: 61 ccgacgga 68
||||||||
Sbjct: 39 ccgacgga 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 taccgacggaacacgtccgtcggt 82
|||||||||| |||||||||||||
Sbjct: 5 taccgacggatcacgtccgtcggt 28
>53168_ptc-miRf11346-akr:pmrd
Length = 98
Score = 77.8 bits (39), Expect = 1e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
||||||||||| || ||||||||||||||| || |||||||||||||||||||| | ||
Sbjct: 1 gttttaccgacagactaattccgtcggtgataggaatgaaatccgtcggtgaaataatta 60
Query: 61 ccgacgg 67
|||||||
Sbjct: 61 ccgacgg 67
>52166_ptc-miRf10344-akr:pmrd
Length = 99
Score = 77.8 bits (39), Expect = 1e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||| ||||||| |||||||||||||||||| |||||| ||||||||||||| | ||
Sbjct: 1 gttttatcgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataatta 60
Query: 61 ccgacgg 67
|||||||
Sbjct: 61 ccgacgg 67
>53422_ptc-miRf11600-akr:pmrd
Length = 91
Score = 71.9 bits (36), Expect = 7e-14
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 8 cgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacataccgacgg 67
||||||| |||||||||||||||||| |||||| ||||||||||||| | |||||||||
Sbjct: 4 cgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataattaccgacgg 63
>54224_ptc-miRf12402-akr:pmrd
Length = 105
Score = 69.9 bits (35), Expect = 3e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||| | ||||| |||||||||| |||||| ||||||||||||| | ||
Sbjct: 4 gttttaccgacggactcattccatcggtgacaggaatgaactccgtcggtgaaatattta 63
Query: 61 ccgacgg 67
|||||||
Sbjct: 64 ccgacgg 70
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 accgacggaacacgtccgtcg 80
|||||||||||||||||||||
Sbjct: 75 accgacggaacacgtccgtcg 95
>54178_ptc-miRf12356-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaa 54
|||||||||| ||| |||||| ||||||||||| |||||| |||||||||||||
Sbjct: 1 gttttaccgatggactaattctgtcggtgacaggaatgaactccgtcggtgaaa 54
>53349_ptc-miRf11527-akr:pmrd
Length = 105
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaa 54
|||||||||||||| |||||||||| ||||||| |||||| ||| |||||||||
Sbjct: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaa 57
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 accgacggaacacgtccgtc 79
||||||||||||||||||||
Sbjct: 75 accgacggaacacgtccgtc 94
>52197_ptc-miRf10375-akr:pmrd
Length = 102
Score = 65.9 bits (33), Expect = 4e-12
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 2 ttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggt 50
|||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 99 ttttaccgacggattaattccgtcggtgtaaggcatgaaatccgtcggt 51
>54311_ptc-miRf12489-akr:pmrd
Length = 100
Score = 61.9 bits (31), Expect = 7e-11
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||| || ||||||||||||||| || ||| ||| ||||||||| | ||
Sbjct: 2 gttttaccgacggactacttccgtcggtgacaggaacgaactccatcggtgaaataatta 61
Query: 61 ccgacgg 67
|||||||
Sbjct: 62 ccgacgg 68
>53201_ptc-miRf11379-akr:pmrd
Length = 105
Score = 61.9 bits (31), Expect = 7e-11
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
|||||||||||||| |||||||||||||||||| |||| | | |||||||||| | ||
Sbjct: 4 gttttaccgacggactaattccgtcggtgacaggaatgcactttgtcggtgaaataatta 63
Query: 61 ccgacgg 67
|||||||
Sbjct: 64 ccgacgg 70
>51991_ptc-miRf10169-akr:pmrd
Length = 99
Score = 60.0 bits (30), Expect = 3e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaa 54
|||||||||||||| |||||| |||||| |||| ||||| |||||||||||||
Sbjct: 1 gttttaccgacggactaattctgtcggtaacaggcatgaactccgtcggtgaaa 54
>52296_ptc-miRf10474-akr:pmrd
Length = 100
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||||||||||||||||||
Sbjct: 2 gttttaccgacggattaattccgtcggtg 30
>53887_ptc-miRf12065-akr:pmrd
Length = 102
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtga 30
|||||||||||||| |||||||||||||||
Sbjct: 3 gttttaccgacggactaattccgtcggtga 32
>52567_ptc-miRf10745-akr:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 7e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaa 54
|||||||||||||| | ||||||||||||| || ||| || || ||||||||||
Sbjct: 1 gttttaccgacggactcattccgtcggtgatagaaatcaactctgtcggtgaaa 54
>52553_ptc-miRf10731-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtcggtga 30
|||||||||| |||||||||||||||
Sbjct: 76 taccgacggaataattccgtcggtga 101
>51866_ptc-miRf10044-akr:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtcggtga 30
|||||||||| |||||||||||||||
Sbjct: 81 taccgacggaataattccgtcggtga 106
>54079_ptc-miRf12257-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 cgacggattaattccgtcggt 28
|||||||||||||||||||||
Sbjct: 71 cgacggattaattccgtcggt 91
>53978_ptc-miRf12156-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggacaaattccgtcggtg 72
>53679_ptc-miRf11857-akr:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggtg 29
|||||||||| ||||||||||||||
Sbjct: 25 taccgacggaataattccgtcggtg 1
>53220_ptc-miRf11398-akr:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 ttaccgacggattaattccgtcggt 28
||||||||||| |||||||||||||
Sbjct: 78 ttaccgacggaataattccgtcggt 102
>52674_ptc-miRf10852-akr:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 3 gttttaccgacggaaaaattccgtcggtg 31
>52595_ptc-miRf10773-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||| |||||||||||||| |||||||
Sbjct: 1 gttttatcgacggattaattctgtcggtg 29
>52594_ptc-miRf10772-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggacaaattccgtcggtg 72
>52463_ptc-miRf10641-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggacaaattccgtcggtg 72
>52442_ptc-miRf10620-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggaacaattccgtcggtg 72
>52326_ptc-miRf10504-akr:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 cgacggattaattccgtcggt 28
|||||||||||||||||||||
Sbjct: 111 cgacggattaattccgtcggt 131
>52258_ptc-miRf10436-akr:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtc 25
|||||||||||||||||||||
Sbjct: 60 taccgacggattaattccgtc 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 cgacggattaattccgtcggt 28
|||||||||||||||||||||
Sbjct: 121 cgacggattaattccgtcggt 141
>52251_ptc-miRf10429-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 102 gttttaccgacggaaaaattccgtcggtg 74
>52130_ptc-miRf10308-akr:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 2 ttttaccgacggattaattccgtcggtga 30
||||||||||||| |||||| ||||||||
Sbjct: 5 ttttaccgacggactaattctgtcggtga 33
>52092_ptc-miRf10270-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggaaaaattccgtcggtg 72
>51874_ptc-miRf10052-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggaaaaattccgtcggtg 72
>54293_ptc-miRf12471-akr:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||||| |||||||||||
Sbjct: 68 taccgacggatttattccgtcggt 45
>54196_ptc-miRf12374-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 32 taccgacggaataattccgtcggt 9
>53325_ptc-miRf11503-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 32 taccgacggaataattccgtcggt 9
>52542_ptc-miRf10720-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 78 taccgacggaataattccgtcggt 101
>52492_ptc-miRf10670-akr:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 75 taccgacggactaattccgtcggt 98
>52164_ptc-miRf10342-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 78 taccgacggaataattccgtcggt 101
>52163_ptc-miRf10341-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 60 accgacggaacacgtccgtcggtaaaac 87
|||||||||| | |||||||||||||||
Sbjct: 73 accgacggaatatgtccgtcggtaaaac 100
>53221_ptc-miRf11399-akr:pmrd
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 4 ttaccgacggattaattccgtcg 26
||||||||||| |||||||||||
Sbjct: 67 ttaccgacggaataattccgtcg 89