miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53825_ptc-miRf12003-akr:pmrd
Length = 94
Score = 77.8 bits (39), Expect = 1e-15
Identities = 81/94 (86%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 1 gtttacctcagtagtggaacattgctgtgcctctagactgactg--gtgttaaatcgttt 58
||||||| ||| ||||||||| |||||| ||||||||||| ||||||||||||||
Sbjct: 1 gtttaccccagcagtggaacactgctgtagtggtagactgactgtggtgttaaatcgttt 60
Query: 59 accccagcagtggaacactgctgtagtggtagac 92
||| ||||||||||||| |||||||| |||||||
Sbjct: 61 acctcagcagtggaacattgctgtagcggtagac 94
>54313_ptc-miRf12491-akr:pmrd
Length = 94
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 55 gtttaccccagcagtggaacactgctgtagtggtagac 92
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttaccccagcagtggaacactgctgtagtggtagac 38
Score = 69.9 bits (35), Expect = 3e-13
Identities = 80/94 (85%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 1 gtttacctcagtagtggaacattgctgtgcctctagactgactg--gtgttaaatcgttt 58
||||||| ||| ||||||||| |||||| ||||||||||| ||||||||||||||
Sbjct: 1 gtttaccccagcagtggaacactgctgtagtggtagactgactgtggtgttaaatcgttt 60
Query: 59 accccagcagtggaacactgctgtagtggtagac 92
||| |||||||| |||| |||||||| |||||||
Sbjct: 61 acctcagcagtgtaacattgctgtagcggtagac 94
