miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>53573_ptc-miRf11751-akr:pmrd
          Length = 100

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                 
Query: 59 tttggcaagcatgtcagacccatgttattttggacttgg 97
          |||||||| ||||||| || ||||||| |||||||||||
Sbjct: 42 tttggcaaacatgtcaaactcatgttactttggacttgg 80




>53575_ptc-miRf11753-akr:pmrd
          Length = 94

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 60 ttggcaagcatgtcagaccc 79
          ||||||||||||||||||||
Sbjct: 40 ttggcaagcatgtcagaccc 59




>53199_ptc-miRf11377-akr:pmrd
          Length = 94

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 60 ttggcaagcatgtcagaccc 79
          ||||||||||||||||||||
Sbjct: 40 ttggcaagcatgtcagaccc 59