miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48535_gma-miR156h:pmrd
Length = 147
Score = 56.0 bits (28), Expect = 2e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 355 gattgagatgacagaagagagagagcac 382
||||||||||||||||||||||||||||
Sbjct: 120 gattgagatgacagaagagagagagcac 147
>51340_ppd-miR156:pmrd
Length = 146
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 359 gagatgacagaagagagagagcac 382
||||||||||||||||||||||||
Sbjct: 123 gagatgacagaagagagagagcac 146
>48470_cru-miR156:pmrd
Length = 67
Score = 48.1 bits (24), Expect = 5e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 355 gattgagatgacagaagagagagagcac 382
||||| ||||||||||||||||||||||
Sbjct: 40 gattgggatgacagaagagagagagcac 67
>48534_gma-miR156g:pmrd
Length = 209
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 360 agatgacagaagagagagagcac 382
|||||||||||||||||||||||
Sbjct: 187 agatgacagaagagagagagcac 209
>54920_zma-miR156j:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 361 gatgacagaagagagagagcac 382
||||||||||||||||||||||
Sbjct: 19 gatgacagaagagagagagcac 40
>54626_sof-miR156h:pmrd
Length = 343
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 361 gatgacagaagagagagagcac 382
||||||||||||||||||||||
Sbjct: 322 gatgacagaagagagagagcac 343
>54396_sbi-miR156d:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 361 gatgacagaagagagagagcac 382
||||||||||||||||||||||
Sbjct: 19 gatgacagaagagagagagcac 40
>48811_osa-miR156k:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 361 gatgacagaagagagagagcac 382
||||||||||||||||||||||
Sbjct: 9 gatgacagaagagagagagcac 30
>48472_csi-miR156b:pmrd
Length = 515
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 361 gatgacagaagagagagagcac 382
||||||||||||||||||||||
Sbjct: 494 gatgacagaagagagagagcac 515
>48426_cpt-miR156b:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 361 gatgacagaagagagagagcac 382
||||||||||||||||||||||
Sbjct: 9 gatgacagaagagagagagcac 30
>46919_ath-miR156o:pmrd
Length = 245
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 361 gatgacagaagagagagagcac 382
||||||||||||||||||||||
Sbjct: 224 gatgacagaagagagagagcac 245
>54928_zma-miR157m:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 358 tgagatgacagaagagagagagcac 382
|||| ||||||||||||||||||||
Sbjct: 165 tgagttgacagaagagagagagcac 189
>54926_zma-miR156q:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 358 tgagatgacagaagagagagagcac 382
|||| ||||||||||||||||||||
Sbjct: 165 tgagttgacagaagagagagagcac 189
>54925_zma-miR156p:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 358 tgagatgacagaagagagagagcac 382
|||| ||||||||||||||||||||
Sbjct: 165 tgagttgacagaagagagagagcac 189
>54627_sof-miR156u:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 358 tgagatgacagaagagagagagcac 382
|||| ||||||||||||||||||||
Sbjct: 58 tgagttgacagaagagagagagcac 82
>48653_hvv-miR156b:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 358 tgagatgacagaagagagagagcac 382
|||| ||||||||||||||||||||
Sbjct: 62 tgagttgacagaagagagagagcac 86
>48492_ghr-miR157:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 362 atgacagaagagagagagcac 382
|||||||||||||||||||||
Sbjct: 1 atgacagaagagagagagcac 21
>48305_bdi-miR156:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 358 tgagatgacagaagagagagagcac 382
|||| ||||||||||||||||||||
Sbjct: 96 tgagttgacagaagagagagagcac 120