miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54658_stu-miR156c:pmrd
Length = 85
Score = 168 bits (85), Expect = 3e-42
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacgaggaaattccggtcctgtagccatattgaacatggattc 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacgaggaaattccggtcctgtagccatattgaacatggattc 60
Query: 592 cttggcacctcgattaaaaacctcg 616
|||||||||||||||||||||||||
Sbjct: 61 cttggcacctcgattaaaaacctcg 85
>54660_stu-miR156e:pmrd
Length = 72
Score = 135 bits (68), Expect = 5e-32
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacgaggaaattccggtcctgtagccatattgaacatggattc 591
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacgaggaaattccggtcctgtaaccatattgaacatggattc 60
Query: 592 cttggcacctcg 603
||||||||||||
Sbjct: 61 cttggcacctcg 72
>48418_can-miR157:pmrd
Length = 155
Score = 117 bits (59), Expect = 1e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcacgaggaaattccggtcctgtagccatattgaacatggatt 590
|||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 1 ttgacagaagagagagagcacgaggaaattccggtcctataaccatattgaacgtggatt 60
Query: 591 ccttggcacct 601
|||||||||||
Sbjct: 61 ccttggcacct 71
>48416_can-miR156a:pmrd
Length = 152
Score = 115 bits (58), Expect = 4e-26
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacgaggaaattccggtcctgtagccatattgaacatggattc 591
||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 1 tgacagaagagagagagcacgaggaaattccggtcctataaccatattgaacgtggattc 60
Query: 592 cttggcacct 601
||||||||||
Sbjct: 61 cttggcacct 70
>54372_pts-miR157:pmrd
Length = 356
Score = 52.0 bits (26), Expect = 5e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 514 tgaaccccaggaattagttgacagaagagagagagcac 551
||||||||| ||||| |||||||||||||||||||||
Sbjct: 319 tgaaccccatgaattgtttgacagaagagagagagcac 356
>54370_pts-miR156b:pmrd
Length = 356
Score = 52.0 bits (26), Expect = 5e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 514 tgaaccccaggaattagttgacagaagagagagagcac 551
||||||||| ||||| |||||||||||||||||||||
Sbjct: 319 tgaaccccatgaattgtttgacagaagagagagagcac 356
>54365_ptr-miR156:pmrd
Length = 373
Score = 50.1 bits (25), Expect = 2e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 515 gaaccccaggaattagttgacagaagagagagagcac 551
|||||||| ||||| |||||||||||||||||||||
Sbjct: 337 gaaccccatgaattgtttgacagaagagagagagcac 373
>46928_ath-miR157m:pmrd
Length = 50
Score = 48.1 bits (24), Expect = 8e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 528 tagttgacagaagagagagagcac 551
||||||||||||||||||||||||
Sbjct: 27 tagttgacagaagagagagagcac 50
>54928_zma-miR157m:pmrd
Length = 189
Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 529 agttgacagaagagagagagcac 551
|||||||||||||||||||||||
Sbjct: 167 agttgacagaagagagagagcac 189
>54926_zma-miR156q:pmrd
Length = 189
Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 529 agttgacagaagagagagagcac 551
|||||||||||||||||||||||
Sbjct: 167 agttgacagaagagagagagcac 189
>54925_zma-miR156p:pmrd
Length = 189
Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 529 agttgacagaagagagagagcac 551
|||||||||||||||||||||||
Sbjct: 167 agttgacagaagagagagagcac 189
>54909_zel-miR157:pmrd
Length = 69
Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcacga 553
|||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacga 23
>54627_sof-miR156u:pmrd
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 529 agttgacagaagagagagagcac 551
|||||||||||||||||||||||
Sbjct: 60 agttgacagaagagagagagcac 82
>48653_hvv-miR156b:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 529 agttgacagaagagagagagcac 551
|||||||||||||||||||||||
Sbjct: 64 agttgacagaagagagagagcac 86
>48632_gra-miR157c:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcacga 553
|||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacga 23
>48305_bdi-miR156:pmrd
Length = 147
Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 529 agttgacagaagagagagagcac 551
|||||||||||||||||||||||
Sbjct: 98 agttgacagaagagagagagcac 120
>54908_zel-miR156:pmrd
Length = 67
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacga 553
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacga 22
>54659_stu-miR156d:pmrd
Length = 171
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacga 553
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacga 22
>51321_par-miR157:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcacg 552
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacg 22
>51319_pam-miR157:pmrd
Length = 216
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcacg 552
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacg 22
>48688_mdo-miR156a:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gttgacagaagagagagagcac 551
||||||||||||||||||||||
Sbjct: 88 gttgacagaagagagagagcac 109
>48643_han-miR157b:pmrd
Length = 364
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcacg 552
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacg 22
>48538_gma-miR157r:pmrd
Length = 147
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gttgacagaagagagagagcac 551
||||||||||||||||||||||
Sbjct: 126 gttgacagaagagagagagcac 147
>48536_gma-miR156i:pmrd
Length = 117
Score = 44.1 bits (22), Expect = 1e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacgaggaa 557
|||||||||||||||||||| |||||
Sbjct: 1 tgacagaagagagagagcacaaggaa 26
>48529_gma-miR156b:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gttgacagaagagagagagcac 551
||||||||||||||||||||||
Sbjct: 19 gttgacagaagagagagagcac 40
>48477_eca-miR156:pmrd
Length = 150
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacga 553
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacga 22
>46903_aqc-miR529:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gttgacagaagagagagagcac 551
||||||||||||||||||||||
Sbjct: 16 gttgacagaagagagagagcac 37
>46857_ahy-miR157k:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gttgacagaagagagagagcac 551
||||||||||||||||||||||
Sbjct: 20 gttgacagaagagagagagcac 41
>54672_tae-miR156b:pmrd
Length = 416
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacg 552
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54671_tae-miR156a:pmrd
Length = 52
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacg 552
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54663_stu-miR157c:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcac 551
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>54623_sof-miR156e:pmrd
Length = 70
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacg 552
|||||||||||||||||||||
Sbjct: 50 tgacagaagagagagagcacg 70
>54531_sin-miR157:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcac 551
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>51320_par-miR156:pmrd
Length = 114
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacg 552
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48818_osa-miR156r:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacg 552
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48787_nbe-miR157b:pmrd
Length = 207
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcac 551
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48786_nbe-miR157a:pmrd
Length = 169
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcac 551
|||||||||||||||||||||
Sbjct: 149 ttgacagaagagagagagcac 169
>48785_nbe-miR156b:pmrd
Length = 169
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcac 551
|||||||||||||||||||||
Sbjct: 149 ttgacagaagagagagagcac 169
>48684_lsa-miR157:pmrd
Length = 357
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcac 551
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48676_lja-miR157b:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcac 551
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48641_han-miR156:pmrd
Length = 362
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacg 552
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48633_gra-miR157d:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 531 ttgacagaagagagagagcac 551
|||||||||||||||||||||
Sbjct: 69 ttgacagaagagagagagcac 89
>48492_ghr-miR157:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacg 552
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacg 22
>48471_csi-miR156a:pmrd
Length = 56
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacg 552
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48426_cpt-miR156b:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacg 552
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcacg 31
>46923_ath-miR156s:pmrd
Length = 218
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacg 552
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>46922_ath-miR156r:pmrd
Length = 326
Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 532 tgacagaagagagagagcacg 552
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
