miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54562_sly-miR403:pmrd
          Length = 130

 Score =  163 bits (82), Expect = 3e-41
 Identities = 94/98 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggaagaggcatatttcacgtttgtgcgtgaatctaacaacccttttcatcagaaaaactg 60
           |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 17  ggaagaggcatatttcacgtttgtgcgtgaatctaacaactcttttcatctgaaaaactg 76

                                                 
Query: 61  ttgttgtttgctagattcacgcacaaactcgtaatatg 98
           || ||||||||||||||||||||||| |||||||||||
Sbjct: 77  ttattgtttgctagattcacgcacaagctcgtaatatg 114




>48424_cpa-miR403:pmrd
          Length = 126

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 69  tgctagattcacgcacaaactcgtaat 95
           |||||||||||||||||||||||||||
Sbjct: 88  tgctagattcacgcacaaactcgtaat 114



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 5  gaggcatatttcacgtttgtgcgtgaatctaa 36
          ||||||||||||| ||||||||| ||||||||
Sbjct: 5  gaggcatatttcaagtttgtgcgcgaatctaa 36




>48413_bst-miR403:pmrd
          Length = 124

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 72  tagattcacgcacaaactcgtaatatgtatttt 104
           |||||||||||||||||||||||| ||| ||||
Sbjct: 91  tagattcacgcacaaactcgtaatctgtctttt 123




>54891_vvi-miR403f:pmrd
          Length = 108

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 72  tagattcacgcacaaactcgtaat 95
           ||||||||||||||||||||||||
Sbjct: 79  tagattcacgcacaaactcgtaat 102




>51759_ptc-miR403a:pmrd
          Length = 132

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 72  tagattcacgcacaaactcgtaat 95
           ||||||||||||||||||||||||
Sbjct: 104 tagattcacgcacaaactcgtaat 127



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 6  aggcatatttcacgtttgtgcgtgaatctaa 36
          |||||||||||| |||||||| |||||||||
Sbjct: 1  aggcatatttcaggtttgtgcatgaatctaa 31




>51353_ppl-miR403:pmrd
          Length = 135

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 72  tagattcacgcacaaactcgtaat 95
           ||||||||||||||||||||||||
Sbjct: 104 tagattcacgcacaaactcgtaat 127




>47024_ath-miR403:pmrd
          Length = 135

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 72  tagattcacgcacaaactcgtaat 95
           ||||||||||||||||||||||||
Sbjct: 104 tagattcacgcacaaactcgtaat 127




>54889_vvi-miR403d:pmrd
          Length = 86

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 19 gtttgtgcgtgaatctaacaacccttt 45
          |||||||||||||||||||| ||||||
Sbjct: 73 gtttgtgcgtgaatctaacaccccttt 47



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 tagattcacgcacaaactcg 91
          ||||||||||||||||||||
Sbjct: 57 tagattcacgcacaaactcg 76




>54887_vvi-miR403b:pmrd
          Length = 86

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 19 gtttgtgcgtgaatctaacaacccttt 45
          |||||||||||||||||||| ||||||
Sbjct: 73 gtttgtgcgtgaatctaacaccccttt 47



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 tagattcacgcacaaactcg 91
          ||||||||||||||||||||
Sbjct: 57 tagattcacgcacaaactcg 76




>54888_vvi-miR403c:pmrd
          Length = 115

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  tagattcacgcacaaactcgt 92
           |||||||||||||||||||||
Sbjct: 86  tagattcacgcacaaactcgt 106




>54886_vvi-miR403a:pmrd
          Length = 115

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  tagattcacgcacaaactcgt 92
           |||||||||||||||||||||
Sbjct: 86  tagattcacgcacaaactcgt 106




>54890_vvi-miR403e:pmrd
          Length = 115

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 72  tagattcacgcacaaactcg 91
           ||||||||||||||||||||
Sbjct: 86  tagattcacgcacaaactcg 105




>51761_ptc-miR403c:pmrd
          Length = 79

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 tagattcacgcacaaactcg 91
          ||||||||||||||||||||
Sbjct: 60 tagattcacgcacaaactcg 79




>51760_ptc-miR403b:pmrd
          Length = 100

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 tagattcacgcacaaactcg 91
          ||||||||||||||||||||
Sbjct: 72 tagattcacgcacaaactcg 91