miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>54058_ptc-miRf12236-akr:pmrd
          Length = 102

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 32 cacgttgttcattcctcttcctaaaatggcttct 65
          ||||||||||||||||||||||||||||||||||
Sbjct: 3  cacgttgttcattcctcttcctaaaatggcttct 36



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 89  gaattcattttaggaagggaatgaa 113
           |||| ||||||||||||||||||||
Sbjct: 69  gaatccattttaggaagggaatgaa 93




>53892_ptc-miRf12070-akr:pmrd
          Length = 112

 Score = 65.9 bits (33), Expect = 8e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 34 cgttgttcattcctcttcctaaaatggcttctc 66
          |||||||||||||||||||||||||||||||||
Sbjct: 1  cgttgttcattcctcttcctaaaatggcttctc 33