miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 71.9 bits (36), Expect = 2e-13
Identities = 141/173 (81%), Gaps = 6/173 (3%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| ||| | | ||| ||||| ||| ||||||||| |||||
Sbjct: 10 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 69
Query: 81 gattccacagtccta--accctaattaattatggggataggcttgcggcttgcatatgtt 138
|| |||||| |||| ||| | | | ||| || || ||| |||||||||||||| |
Sbjct: 70 aatcccacagccctatcaccatcagtcattttg---atgggcctgcggcttgcatatctc 126
Query: 139 aggagctttattacctctttgttttatctttctttggattgaagggagctcta 191
|||||||||||||||| |||| |||||| |||||||||||||||||||||
Sbjct: 127 aggagctttattacct-aatgttagatctttttttggattgaagggagctcta 178
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 69.9 bits (35), Expect = 7e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||
Sbjct: 5 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 64
Query: 81 gattccacagtccta 95
|| ||||||||||||
Sbjct: 65 ga-tccacagtccta 78
Score = 54.0 bits (27), Expect = 4e-08
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 113 ggataggcttgcggcttgcatatgttaggagctttattacctctttgttttatctttctt 172
||||||| ||||||||||||||| | |||||||||||| ||| |||| ||| | ||
Sbjct: 92 ggataggtttgcggcttgcatatctcaggagctttattgcct-aatgttagatccctttt 150
Query: 173 tggattgaagggagctcta 191
|||||||||||||||||||
Sbjct: 151 tggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 69.9 bits (35), Expect = 7e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||
Sbjct: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Query: 81 gattccacagtccta 95
|| ||||||||||||
Sbjct: 70 ga-tccacagtccta 83
Score = 54.0 bits (27), Expect = 4e-08
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 113 ggataggcttgcggcttgcatatgttaggagctttattacctctttgttttatctttctt 172
||||||| ||||||||||||||| | |||||||||||| ||| |||| ||| | ||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcct-aatgttagatccctttt 155
Query: 173 tggattgaagggagctcta 191
|||||||||||||||||||
Sbjct: 156 tggattgaagggagctcta 174
>51602_ptc-miR159a:pmrd
Length = 183
Score = 69.9 bits (35), Expect = 7e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||
Sbjct: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Query: 81 gattccacagtccta 95
|| ||||||||||||
Sbjct: 70 ga-tccacagtccta 83
>54540_sly-miR159:pmrd
Length = 177
Score = 61.9 bits (31), Expect = 2e-10
Identities = 59/66 (89%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 128 ttgcatatgttaggagctttatt--acctctttgttttatctttctttggattgaaggga 185
|||||||||| |||||||||||| ||| |||||||| ||| || |||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacc-ctttgtttgatcattttttggattgaaggga 171
Query: 186 gctcta 191
||||||
Sbjct: 172 gctcta 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 22 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 81
|||||||||||||||||||| | | || | |||| ||||| ||||||||| ||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 82 attccacagtccta 95
||||| ||| ||||
Sbjct: 61 attcctcagcccta 74
>48699_mtr-miR159a:pmrd
Length = 168
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 159 gttttatctttctttggattgaagggagctcta 191
|||| ||||||||||||||||||||||||||||
Sbjct: 136 gtttaatctttctttggattgaagggagctcta 168
>54777_vvi-miR159c:pmrd
Length = 190
Score = 54.0 bits (27), Expect = 4e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| ||||| | || | ||||| || ||||||||| ||||
Sbjct: 8 gtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatg 67
Query: 81 gattccacagtccta 95
||| |||||| ||||
Sbjct: 68 gatcccacagcccta 82
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacac 194
||||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctacac 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 113 ggataggcttgcggcttgcatatgttaggagct 145
||||||||||| ||||||||||| | |||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagct 135
>48539_gma-miR159a:pmrd
Length = 214
Score = 54.0 bits (27), Expect = 4e-08
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| |||||| || | |||| ||| ||||||| | |||||
Sbjct: 20 gtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatg 79
Query: 81 gattccacagt 91
||| |||||||
Sbjct: 80 gatcccacagt 90
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctacac 194
|||||||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctctacac 198
>48395_bra-miR159a:pmrd
Length = 185
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctaca 193
||||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctaca 193
||||||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctctaca 183
>54378_pvu-miR159:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctac 192
|||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctctac 174
Score = 46.1 bits (23), Expect = 1e-05
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| |||||| || | |||| || ||||||| | |||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 gattccacagt 91
||| |||||||
Sbjct: 61 gatcccacagt 71
>54377_pvu-miR159:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctac 192
|||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctctac 174
Score = 46.1 bits (23), Expect = 1e-05
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatg 80
||||||||||||||||||||| |||||| || | |||| || ||||||| | |||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 gattccacagt 91
||| |||||||
Sbjct: 61 gatcccacagt 71
>46931_ath-miR159a:pmrd
Length = 184
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctac 192
|||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctctac 184
>48686_ltu-miR159:pmrd
Length = 345
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacac 194
||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacac 24
>48824_osa-miR159f:pmrd
Length = 188
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 ttggattgaagggagctctacac 194
|||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctacac 181
>48701_mtr-miR159c:pmrd
Length = 44
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctaca 193
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctaca 23
>46932_ath-miR159b:pmrd
Length = 196
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctct 190
|||||||||||||||||||||||
Sbjct: 165 ttctttggattgaagggagctct 187
>54930_zma-miR159a:pmrd
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>54631_sof-miR159d:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48820_osa-miR159b:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>48819_osa-miR159a:pmrd
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>48728_mtr-miR319b:pmrd
Length = 42
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 ttggattgaagggagctctaca 193
||||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctctaca 22
