miRNEST 2.0, an integrative microRNA resource :: BLAST
>54388_rco-miR168:pmrd
Length = 156
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 cggcagtctctaattcgcttggtgcaggtcgggaa 35
|||| ||||||||||||||||||||||||||||||
Sbjct: 5 cggcggtctctaattcgcttggtgcaggtcgggaa 39
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggagaccg 130
|||||||||||||||||||||||| ||||||
Sbjct: 118 tcccgccttgcatcaactgaatcgaagaccg 148
>54802_vvi-miR168:pmrd
Length = 132
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 gtctctaattcgcttggtgcaggtcgggaa 35
||||||||||||||||||||||||||||||
Sbjct: 2 gtctctaattcgcttggtgcaggtcgggaa 31
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggagac 128
|||||||||||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggagac 129
>51651_ptc-miR168b:pmrd
Length = 136
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 gtctctaattcgcttggtgcaggtcgggaa 35
||||||||||||||||||||||||||||||
Sbjct: 2 gtctctaattcgcttggtgcaggtcgggaa 31
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggaga 127
||||||||||||||||||||||||||||
Sbjct: 109 tcccgccttgcatcaactgaatcggaga 136
>48560_gma-miR168:pmrd
Length = 125
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 gtctctaattcgcttggtgcaggtcgggaa 35
||||||||||||||||||||||||||||||
Sbjct: 10 gtctctaattcgcttggtgcaggtcgggaa 39
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggagaccgcg 132
||||||||||||||||||||||||||| |||||
Sbjct: 87 tcccgccttgcatcaactgaatcggaggccgcg 119
>51650_ptc-miR168a:pmrd
Length = 160
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggag 126
|||||||||||||||||||||||||||
Sbjct: 133 tcccgccttgcatcaactgaatcggag 159
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 gtctctaattcgcttggtgcaggtcgggaa 35
|||||| |||||||||||||||||||||||
Sbjct: 2 gtctctgattcgcttggtgcaggtcgggaa 31
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcgga 125
||||||||||||||||||||||||||
Sbjct: 97 tcccgccttgcatcaactgaatcgga 122
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcgggaa 33
>46957_ath-miR168a:pmrd
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcgga 125
||||||||||||||||||||||||||
Sbjct: 102 tcccgccttgcatcaactgaatcgga 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaa 38
>55000_zma-miR168b:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggag 126
|||||||||||||||| ||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggag 92
>46958_ath-miR168b:pmrd
Length = 124
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcgggaa 39
>54375_pts-miR168b:pmrd
Length = 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 tcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaa 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactga 119
||||||||||||||||||||
Sbjct: 121 tcccgccttgcatcaactga 140
>54374_pts-miR168a:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 tcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaa 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactga 119
||||||||||||||||||||
Sbjct: 99 tcccgccttgcatcaactga 118
>54366_ptr-miR168:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 tcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaa 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactga 119
||||||||||||||||||||
Sbjct: 99 tcccgccttgcatcaactga 118
>48649_hte-miR168:pmrd
Length = 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 tcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaa 21
>48349_bna-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 tcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaa 38
>46959_ath-miR168m:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 tcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaa 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactga 119
||||||||||||||||||||
Sbjct: 85 tcccgccttgcatcaactga 104
>54665_stu-miR168:pmrd
Length = 133
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 tcgcttggtgcaggtcggga 34
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactga 119
||||||||||||||||||||
Sbjct: 114 tcccgccttgcatcaactga 133
>54546_sly-miR168:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 tcgcttggtgcaggtcggga 34
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
