miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>49004_osa-miR442:pmrd
          Length = 233

 Score =  137 bits (69), Expect = 2e-33
 Identities = 105/116 (90%), Gaps = 1/116 (0%)
 Strand = Plus / Plus

                                                                       
Query: 18  aaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttaca 77
           ||||||||||||||||||||||||  | |||||  |||||| ||||||||||||| ||||
Sbjct: 60  aaattgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctaca 119

                                                                   
Query: 78  ggtaaacatttgctaatgacaaattaattaggcttaataaattcatctcgcagttt 133
           | ||||||||||||||||||  |||||||||||||||||||||| |||||||||||
Sbjct: 120 g-taaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagttt 174




>50895_osa-miRf11680-akr:pmrd
          Length = 145

 Score =  107 bits (54), Expect = 2e-24
 Identities = 108/125 (86%), Gaps = 1/125 (0%)
 Strand = Plus / Plus

                                                                       
Query: 18  aaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttaca 77
           ||||||||||||| ||||||||||  | |||||  ||| |||||||||||||||| || |
Sbjct: 15  aaattgcgagacggatcttttaagcctaattgcaccataatttgacaatgtggtgctaaa 74

                                                                       
Query: 78  ggtaaacatttgctaatgacaaattaattaggcttaataaattcatctcgcagttttctg 137
           | |||||||||||||||||   |||||||||||||||||||||| |||||| |||| | |
Sbjct: 75  g-taaacatttgctaatgatggattaattaggcttaataaattcgtctcgcggtttacag 133

                
Query: 138 gcgga 142
           |||||
Sbjct: 134 gcgga 138




>50149_osa-miRf10934-akr:pmrd
          Length = 143

 Score = 95.6 bits (48), Expect = 8e-21
 Identities = 96/111 (86%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  aggaaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgtt 74
           ||||||| ||||||||||||||||| |  | |||||| ||| |||| ||||||| ||| |
Sbjct: 11  aggaaatcgcgagacgaatcttttaggcctaattgcgccataatttaacaatgttgtggt 70

                                                              
Query: 75  acaggtaaacatttgctaatgacaaattaattaggcttaataaattcatct 125
           |||  ||||||||||||||||||  ||||||||||||| ||||||||||||
Sbjct: 71  acaa-taaacatttgctaatgacggattaattaggcttcataaattcatct 120




>49008_osa-miR445a:pmrd
          Length = 268

 Score = 65.9 bits (33), Expect = 8e-12
 Identities = 90/108 (83%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                       
Query: 23  gcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttacaggtaa 82
           |||||||||||||||| ||| | ||| |  ||||||||||||||||| || |||| ||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctaca-gtaa 128

                                                           
Query: 83  acatttgctaatgacaaattaattaggcttaataaattcatctcgcag 130
           || |||  |||| |   ||||||||||||||| |||||| ||||||||
Sbjct: 127 acttttcataattatggattaattaggcttaaaaaattcgtctcgcag 80




>49015_osa-miR445h:pmrd
          Length = 277

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 100 attaattaggcttaataaattcatctcgcag 130
           ||||||||||||||| |||||| ||||||||
Sbjct: 123 attaattaggcttaaaaaattcgtctcgcag 93




>49014_osa-miR445g:pmrd
          Length = 275

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 100 attaattaggcttaataaattcatctcgcag 130
           ||||||||||||||| |||||| ||||||||
Sbjct: 122 attaattaggcttaaaaaattcgtctcgcag 92




>49012_osa-miR445e:pmrd
          Length = 265

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 100 attaattaggcttaataaattcatctcgcag 130
           ||||||||||||||| |||||| ||||||||
Sbjct: 117 attaattaggcttaaaaaattcgtctcgcag 87




>49010_osa-miR445c:pmrd
          Length = 260

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 100 attaattaggcttaataaattcatctcgcag 130
           ||||||||||||||| |||||| ||||||||
Sbjct: 115 attaattaggcttaaaaaattcgtctcgcag 85




>51249_osa-miRf12034-akr:pmrd
          Length = 121

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 88  tgctaatgacaaattaattaggcttaataaattcatctcgcagttt 133
           ||||||||||  |||||||||||| || | ||||||||||| ||||
Sbjct: 74  tgctaatgacggattaattaggctcaagagattcatctcgcggttt 119




>50021_osa-miRf10806-akr:pmrd
          Length = 123

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 16  ggaaattgcgagacgaatcttttaag 41
           |||||| |||||||||||||||||||
Sbjct: 123 ggaaatcgcgagacgaatcttttaag 98




>51304_osa-miRf12089-akr:pmrd
          Length = 120

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 83  acatttgctaatgacaaattaattaggct 111
           |||| |||||||||| |||||||||||||
Sbjct: 53  acatgtgctaatgacgaattaattaggct 25