miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48756_mtr-miR399g:pmrd
          Length = 74

 Score =  139 bits (70), Expect = 7e-34
 Identities = 73/74 (98%)
 Strand = Plus / Plus

                                                                       
Query: 41  tagggcttctctttcttggcaggaaattatcatgaccattccatcatgtgtcttgccaaa 100
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1   tagggcttctctttcttggcaggaaattatcctgaccattccatcatgtgtcttgccaaa 60

                         
Query: 101 ggagagttgccctg 114
           ||||||||||||||
Sbjct: 61  ggagagttgccctg 74




>54381_pvu-miR399a:pmrd
          Length = 223

 Score =  111 bits (56), Expect = 2e-25
 Identities = 99/112 (88%), Gaps = 1/112 (0%)
 Strand = Plus / Plus

                                                                       
Query: 26  taagcaaatcagctatagggcttctctttcttggcaggaaattatcatgaccattccatc 85
           |||||||| ||| |||||||||||||||| |||||||||||| | |||||||| | ||| 
Sbjct: 22  taagcaaaccagttatagggcttctctttgttggcaggaaatga-catgaccacttcatg 80

                                                               
Query: 86  atgtgtcttgccaaaggagagttgccctgttgctgttttagcttaatgtgta 137
           |  | |||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 81  aaatatcttgccaaaggagagttgccctgttgctgctttagcttaatatgta 132




>54878_vvi-miR399b:pmrd
          Length = 117

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 86  atgtgtcttgccaaaggagagttgccctgt 115
           ||||| ||||||||||||||||||||||||
Sbjct: 79  atgtgacttgccaaaggagagttgccctgt 108




>51755_ptc-miR399i:pmrd
          Length = 108

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 88  gtgtcttgccaaaggagagttgccct 113
           ||||||||||||||||||||||||||
Sbjct: 73  gtgtcttgccaaaggagagttgccct 98




>47017_ath-miR399c:pmrd
          Length = 114

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 92  cttgccaaaggagagttgccctgt 115
           ||||||||||||||||||||||||
Sbjct: 82  cttgccaaaggagagttgccctgt 105




>55098_zma-miR399h:pmrd
          Length = 85

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 42 agggcttctctttcttggcagg 63
          ||||||||||||||||||||||
Sbjct: 2  agggcttctctttcttggcagg 23



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 94  tgccaaaggagagttgccctg 114
           |||||||||||||||||||||
Sbjct: 65  tgccaaaggagagttgccctg 85




>55095_zma-miR399e:pmrd
          Length = 124

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 42 agggcttctctttcttggcagg 63
          ||||||||||||||||||||||
Sbjct: 22 agggcttctctttcttggcagg 43



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  tgccaaaggagagttgccctgt 115
           ||||||||||||||||||||||
Sbjct: 85  tgccaaaggagagttgccctgt 106




>54879_vvi-miR399c:pmrd
          Length = 82

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  tgccaaaggagagttgccctgt 115
           ||||||||||||||||||||||
Sbjct: 52  tgccaaaggagagttgccctgt 73




>54497_sbi-miR399i:pmrd
          Length = 121

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 42 agggcttctctttcttggcagg 63
          ||||||||||||||||||||||
Sbjct: 22 agggcttctctttcttggcagg 43



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  tgccaaaggagagttgccctgt 115
           ||||||||||||||||||||||
Sbjct: 82  tgccaaaggagagttgccctgt 103




>54885_vvi-miR399i:pmrd
          Length = 122

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  gccaaaggagagttgccctgt 115
           |||||||||||||||||||||
Sbjct: 93  gccaaaggagagttgccctgt 113




>54492_sbi-miR399d:pmrd
          Length = 205

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 94  tgccaaaggagagttgccctg 114
           |||||||||||||||||||||
Sbjct: 166 tgccaaaggagagttgccctg 186




>48967_osa-miR399d:pmrd
          Length = 286

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 94  tgccaaaggagagttgccctg 114
           |||||||||||||||||||||
Sbjct: 256 tgccaaaggagagttgccctg 276




>48088_ath-miRf10988-akr:pmrd
          Length = 129

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 94  tgccaaaggagagttgccctg 114
           |||||||||||||||||||||
Sbjct: 102 tgccaaaggagagttgccctg 122




>47473_ath-miRf10373-akr:pmrd
          Length = 125

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 94  tgccaaaggagagttgccctg 114
           |||||||||||||||||||||
Sbjct: 100 tgccaaaggagagttgccctg 120




>47472_ath-miRf10372-akr:pmrd
          Length = 131

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 94  tgccaaaggagagttgccctg 114
           |||||||||||||||||||||
Sbjct: 103 tgccaaaggagagttgccctg 123




>47016_ath-miR399b:pmrd
          Length = 135

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 94  tgccaaaggagagttgccctg 114
           |||||||||||||||||||||
Sbjct: 105 tgccaaaggagagttgccctg 125




>55102_zma-miR399l:pmrd
          Length = 86

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 92  cttgccaaaggagagttgccctgt 115
           |||||||||||||| |||||||||
Sbjct: 63  cttgccaaaggagaattgccctgt 86




>54561_sly-miR399:pmrd
          Length = 71

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  tgccaaaggagagttgccct 113
           ||||||||||||||||||||
Sbjct: 51  tgccaaaggagagttgccct 70




>51754_ptc-miR399h:pmrd
          Length = 132

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 92  cttgccaaaggagagttgccctgt 115
           ||||||||||||||||| ||||||
Sbjct: 101 cttgccaaaggagagtttccctgt 124




>51352_ppl-miR399b:pmrd
          Length = 132

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 92  cttgccaaaggagagttgccctgt 115
           ||||||||||||||||| ||||||
Sbjct: 101 cttgccaaaggagagtttccctgt 124




>48973_osa-miR399j:pmrd
          Length = 106

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  tgccaaaggagagttgccct 113
           ||||||||||||||||||||
Sbjct: 76  tgccaaaggagagttgccct 95




>48751_mtr-miR399b:pmrd
          Length = 112

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 92  cttgccaaaggagagttgccctgt 115
           ||||||||||||||| ||||||||
Sbjct: 71  cttgccaaaggagagctgccctgt 94




>46891_aqc-miR399:pmrd
          Length = 98

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  tgccaaaggagagttgccct 113
           ||||||||||||||||||||
Sbjct: 72  tgccaaaggagagttgccct 91