miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>48612_gma-miR1525:pmrd
          Length = 274

 Score =  230 bits (116), Expect = 6e-61
 Identities = 140/148 (94%)
 Strand = Plus / Plus

                                                                       
Query: 35  gttaattaagtttttagtccctataaatattcacagttttgtttttagtccctacaaaat 94
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 14  gttaattaagtttttagtccctataaatattcatagttttgtttttagtccctacaaaat 73

                                                                       
Query: 95  aaaatcacactttttagtccctgtgacattttccttaagcattttagggaccaaaaatgt 154
           || ||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 74  aagatcacactttttagtccttgtgacattttccttaagcattttagggactaaaactgt 133

                                       
Query: 155 tgatgaaaatttttaacagggattaaaa 182
           |||||||| ||||| ||||||| |||||
Sbjct: 134 tgatgaaatttttttacagggactaaaa 161



 Score =  129 bits (65), Expect = 2e-30
 Identities = 78/81 (96%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 36  ttaattaagtttttagtccctataaatattcacagttttgtttttagtccctacaaaata 95
           ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 ttaattaagtttttagtcc-tataaatattcacagttttgtttttagtccttacaaaata 203

                                
Query: 96  aaatcacactttttagtccct 116
           |||||| ||||||||||||||
Sbjct: 202 aaatcatactttttagtccct 182