miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>49455_osa-miRf10240-akr:pmrd
          Length = 128

 Score =  159 bits (80), Expect = 1e-39
 Identities = 113/124 (91%)
 Strand = Plus / Plus

                                                                       
Query: 46  ggaaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgctaca 105
           |||||||| |||||||||||||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 5   ggaaatcatgagacgaatcttttgagcctaattagtatatgattaaccataagtgctaca 64

                                                                       
Query: 106 gtaacccacatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttcc 165
            ||||||||||||||||||   ||||||||||| |||||||||||||| || ||||||||
Sbjct: 65  ataacccacatgtgctaataacggattaattaggctcaaaagattcgtctcgcggtttcc 124

               
Query: 166 aggc 169
           ||||
Sbjct: 125 aggc 128



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 45  tggaaatcacgagacgaatcttttgagcctaattagtccatgattagc 92
           |||||| | |||||||||||||||||||||||||| ||| | ||||||
Sbjct: 125 tggaaaccgcgagacgaatcttttgagcctaattaatccgttattagc 78




>51000_osa-miRf11785-akr:pmrd
          Length = 128

 Score =  155 bits (78), Expect = 2e-38
 Identities = 111/122 (90%)
 Strand = Plus / Minus

                                                                       
Query: 48  aaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgctacagt 107
           ||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 122 aaatcgcgagacaaatcttttgagcctaattagttcatgattagccataagtgctacagt 63

                                                                       
Query: 108 aacccacatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttccag 167
           |||| ||||||| |||||  || |||||||| |||||||||||||| || ||||||||||
Sbjct: 62  aacctacatgtgttaatgacggcttaattaggctcaaaagattcgtctcgcggtttccag 3

             
Query: 168 gc 169
           ||
Sbjct: 2   gc 1



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 45 tggaaatcacgagacgaatcttttgagcctaatta 79
          |||||| | ||||||||||||||||||||||||||
Sbjct: 4  tggaaaccgcgagacgaatcttttgagcctaatta 38




>49733_osa-miRf10518-akr:pmrd
          Length = 122

 Score =  143 bits (72), Expect = 6e-35
 Identities = 108/120 (90%)
 Strand = Plus / Minus

                                                                       
Query: 46  ggaaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgctaca 105
           |||||| ||||||||||||||||||||||||||||||  |||||| |||||| |||||||
Sbjct: 121 ggaaataacgagacgaatcttttgagcctaattagtctgtgattaaccataaatgctaca 62

                                                                       
Query: 106 gtaacccacatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttcc 165
           ||||||||||||| ||||||  || |||||||| |||||||||||||| || ||||||||
Sbjct: 61  gtaacccacatgtactaatgacggcttaattaggctcaaaagattcgtctcgcggtttcc 2



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 54 cgagacgaatcttttgagcctaatta 79
          ||||||||||||||||||||||||||
Sbjct: 10 cgagacgaatcttttgagcctaatta 35




>49652_osa-miRf10437-akr:pmrd
          Length = 120

 Score =  143 bits (72), Expect = 6e-35
 Identities = 108/120 (90%)
 Strand = Plus / Plus

                                                                       
Query: 46  ggaaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgctaca 105
           ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 1   ggaaatcgcgagacaaatcttttgagcctaattagtccatgattagccataaatgctata 60

                                                                       
Query: 106 gtaacccacatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttcc 165
           |||||||| || | |||||| |||||||||||  |||||||||||||| || ||||||||
Sbjct: 61  gtaacccaaatatactaatgatggattaattatgctcaaaagattcgtctcgcggtttcc 120



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 54  cgagacgaatcttttgagcctaattagtccatgattag 91
           ||||||||||||||||||| |||||| ||||| |||||
Sbjct: 112 cgagacgaatcttttgagcataattaatccatcattag 75




>50021_osa-miRf10806-akr:pmrd
          Length = 123

 Score =  137 bits (69), Expect = 4e-33
 Identities = 110/123 (89%), Gaps = 3/123 (2%)
 Strand = Plus / Minus

                                                                       
Query: 46  ggaaatcacgagacgaatcttttgagcctaattagtcc---atgattagccataagtgct 102
           ||||||| ||||||||||||||| |||||||||||| |   | |||||||||||||||||
Sbjct: 123 ggaaatcgcgagacgaatcttttaagcctaattagtactacacgattagccataagtgct 64

                                                                       
Query: 103 acagtaacccacatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtt 162
           ||||||| |||||||||||||||  ||||||||||| |||||||||||||| || |||||
Sbjct: 63  acagtaatccacatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggtt 4

              
Query: 163 tcc 165
           |||
Sbjct: 3   tcc 1



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 54 cgagacgaatcttttgagcctaattagtccatgattagc 92
          |||||||||||||||||||||||||| ||| | ||||||
Sbjct: 9  cgagacgaatcttttgagcctaattaatccgtcattagc 47




>51304_osa-miRf12089-akr:pmrd
          Length = 120

 Score =  135 bits (68), Expect = 1e-32
 Identities = 98/108 (90%)
 Strand = Plus / Minus

                                                                       
Query: 46  ggaaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgctaca 105
           ||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||| |
Sbjct: 120 ggaaatcgcgagacgaatcttttgagtctaattagcccatgatttgccataagtgctata 61

                                                           
Query: 106 gtaacccacatgtgctaatggtggattaattagtctcaaaagattcgt 153
           | ||||||||||||||||||  | ||||||||| ||||||||||||||
Sbjct: 60  gcaacccacatgtgctaatgacgaattaattaggctcaaaagattcgt 13



 Score = 60.0 bits (30), Expect = 7e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 46 ggaaatcacgagacgaatcttttgagcctaatta 79
          ||||||||| ||||||||||||||||||||||||
Sbjct: 1  ggaaatcacaagacgaatcttttgagcctaatta 34




>51249_osa-miRf12034-akr:pmrd
          Length = 121

 Score =  131 bits (66), Expect = 2e-31
 Identities = 99/110 (90%)
 Strand = Plus / Plus

                                                                       
Query: 56  agacgaatcttttgagcctaattagtccatgattagccataagtgctacagtaacccaca 115
           ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  |
Sbjct: 12  agacgaatcttttgagcctaattagtccatgattagttataagtgctacagtaacccgta 71

                                                             
Query: 116 tgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttcc 165
           ||||||||||  ||||||||||| ||||| |||||| | || ||||||||
Sbjct: 72  tgtgctaatgacggattaattaggctcaagagattcatctcgcggtttcc 121




>50516_osa-miRf11301-akr:pmrd
          Length = 139

 Score =  125 bits (63), Expect = 1e-29
 Identities = 72/75 (96%)
 Strand = Plus / Minus

                                                                       
Query: 44  atggaaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgcta 103
           ||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 78  atggaaatcgcgagacgaatcttttgagcctaattagtctatgattaaccataagtgcta 19

                          
Query: 104 cagtaacccacatgt 118
           |||||||||||||||
Sbjct: 18  cagtaacccacatgt 4



 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 85  tgattagccataagtgctacagtaacccacatgtgct 121
           |||||| ||||| |||||| |||||||||||||||||
Sbjct: 103 tgattaaccataggtgctatagtaacccacatgtgct 139




>50155_osa-miRf10940-akr:pmrd
          Length = 96

 Score = 99.6 bits (50), Expect = 8e-22
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                       
Query: 52  cacgagacgaatcttttgagcctaattagtccatgattagccataagtgctacagtaacc 111
           |||||||| ||||||||||| ||||||||||||||||||||||||||||||| || ||||
Sbjct: 1   cacgagacaaatcttttgagtctaattagtccatgattagccataagtgctatagcaacc 60

                 
Query: 112 cacatg 117
           ||||||
Sbjct: 61  cacatg 66




>49010_osa-miR445c:pmrd
          Length = 260

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 51  tcacgagacgaatcttttgagcctaattagtccatgattag 91
           |||||||||||||||||| ||||||||||  ||||||||||
Sbjct: 176 tcacgagacgaatcttttaagcctaattacaccatgattag 136




>49015_osa-miR445h:pmrd
          Length = 277

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 54  cgagacgaatcttttgagcctaattagtccatgattag 91
           |||||||||||||||||| |||||||  ||||||||||
Sbjct: 181 cgagacgaatcttttgagtctaattacaccatgattag 144




>49013_osa-miR445f:pmrd
          Length = 305

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 54  cgagacgaatcttttgagcctaattagtccatgattag 91
           |||||||||||||||||| |||||||  ||||||||||
Sbjct: 196 cgagacgaatcttttgagtctaattacaccatgattag 159




>49012_osa-miR445e:pmrd
          Length = 265

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 54  cgagacgaatcttttgagcctaattagtccatgattag 91
           |||||||||||||||||| |||||||  ||||||||||
Sbjct: 175 cgagacgaatcttttgagtctaattacaccatgattag 138




>49009_osa-miR445b:pmrd
          Length = 264

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 54  cgagacgaatcttttgagcctaattagtccatgattag 91
           |||||||||||||||||| |||||||  ||||||||||
Sbjct: 174 cgagacgaatcttttgagtctaattacaccatgattag 137




>51205_osa-miRf11990-akr:pmrd
          Length = 135

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 54 cgagacgaatcttttgagcctaattagtccatgatta 90
          |||||| ||||| ||||||||||||| ||||||||||
Sbjct: 12 cgagacaaatctattgagcctaattaatccatgatta 48




>49008_osa-miR445a:pmrd
          Length = 268

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 54  cgagacgaatcttttgagcctaattagtccatgatt 89
           |||||||||||||||||| |||||||  ||||||||
Sbjct: 185 cgagacgaatcttttgagtctaattacaccatgatt 150




>49004_osa-miR442:pmrd
          Length = 233

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 54  cgagacgaatcttttgagcctaattagtccatgat 88
           ||||||||||||||| |||||||||  ||||||||
Sbjct: 66  cgagacgaatcttttaagcctaattgctccatgat 100




>50895_osa-miRf11680-akr:pmrd
          Length = 145

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 113 acatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttccaggcg 170
           |||| |||||||| |||||||||||| || || | |||||| || |||||| ||||||
Sbjct: 79  acatttgctaatgatggattaattaggcttaataaattcgtctcgcggtttacaggcg 136




>50149_osa-miRf10934-akr:pmrd
          Length = 143

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 46 ggaaatcacgagacgaatcttttgagcctaatt 78
          ||||||| |||||||||||||||  ||||||||
Sbjct: 12 ggaaatcgcgagacgaatcttttaggcctaatt 44




>49014_osa-miR445g:pmrd
          Length = 275

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 56  agacgaatcttttgagcctaattagtccatgattag 91
           ||||||||||||||||  ||||||  ||||||||||
Sbjct: 178 agacgaatcttttgagtttaattacaccatgattag 143