miRNEST 2.0, an integrative microRNA resource :: BLAST
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 159 bits (80), Expect = 1e-39
Identities = 113/124 (91%)
Strand = Plus / Plus
Query: 46 ggaaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgctaca 105
|||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 5 ggaaatcatgagacgaatcttttgagcctaattagtatatgattaaccataagtgctaca 64
Query: 106 gtaacccacatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttcc 165
|||||||||||||||||| ||||||||||| |||||||||||||| || ||||||||
Sbjct: 65 ataacccacatgtgctaataacggattaattaggctcaaaagattcgtctcgcggtttcc 124
Query: 166 aggc 169
||||
Sbjct: 125 aggc 128
Score = 56.0 bits (28), Expect = 1e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 45 tggaaatcacgagacgaatcttttgagcctaattagtccatgattagc 92
|||||| | |||||||||||||||||||||||||| ||| | ||||||
Sbjct: 125 tggaaaccgcgagacgaatcttttgagcctaattaatccgttattagc 78
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 155 bits (78), Expect = 2e-38
Identities = 111/122 (90%)
Strand = Plus / Minus
Query: 48 aaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgctacagt 107
||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 122 aaatcgcgagacaaatcttttgagcctaattagttcatgattagccataagtgctacagt 63
Query: 108 aacccacatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttccag 167
|||| ||||||| ||||| || |||||||| |||||||||||||| || ||||||||||
Sbjct: 62 aacctacatgtgttaatgacggcttaattaggctcaaaagattcgtctcgcggtttccag 3
Query: 168 gc 169
||
Sbjct: 2 gc 1
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 45 tggaaatcacgagacgaatcttttgagcctaatta 79
|||||| | ||||||||||||||||||||||||||
Sbjct: 4 tggaaaccgcgagacgaatcttttgagcctaatta 38
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 143 bits (72), Expect = 6e-35
Identities = 108/120 (90%)
Strand = Plus / Minus
Query: 46 ggaaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgctaca 105
|||||| |||||||||||||||||||||||||||||| |||||| |||||| |||||||
Sbjct: 121 ggaaataacgagacgaatcttttgagcctaattagtctgtgattaaccataaatgctaca 62
Query: 106 gtaacccacatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttcc 165
||||||||||||| |||||| || |||||||| |||||||||||||| || ||||||||
Sbjct: 61 gtaacccacatgtactaatgacggcttaattaggctcaaaagattcgtctcgcggtttcc 2
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 cgagacgaatcttttgagcctaatta 79
||||||||||||||||||||||||||
Sbjct: 10 cgagacgaatcttttgagcctaatta 35
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 143 bits (72), Expect = 6e-35
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 46 ggaaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgctaca 105
||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 1 ggaaatcgcgagacaaatcttttgagcctaattagtccatgattagccataaatgctata 60
Query: 106 gtaacccacatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttcc 165
|||||||| || | |||||| ||||||||||| |||||||||||||| || ||||||||
Sbjct: 61 gtaacccaaatatactaatgatggattaattatgctcaaaagattcgtctcgcggtttcc 120
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 54 cgagacgaatcttttgagcctaattagtccatgattag 91
||||||||||||||||||| |||||| ||||| |||||
Sbjct: 112 cgagacgaatcttttgagcataattaatccatcattag 75
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 137 bits (69), Expect = 4e-33
Identities = 110/123 (89%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 46 ggaaatcacgagacgaatcttttgagcctaattagtcc---atgattagccataagtgct 102
||||||| ||||||||||||||| |||||||||||| | | |||||||||||||||||
Sbjct: 123 ggaaatcgcgagacgaatcttttaagcctaattagtactacacgattagccataagtgct 64
Query: 103 acagtaacccacatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtt 162
||||||| ||||||||||||||| ||||||||||| |||||||||||||| || |||||
Sbjct: 63 acagtaatccacatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggtt 4
Query: 163 tcc 165
|||
Sbjct: 3 tcc 1
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 54 cgagacgaatcttttgagcctaattagtccatgattagc 92
|||||||||||||||||||||||||| ||| | ||||||
Sbjct: 9 cgagacgaatcttttgagcctaattaatccgtcattagc 47
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 135 bits (68), Expect = 1e-32
Identities = 98/108 (90%)
Strand = Plus / Minus
Query: 46 ggaaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgctaca 105
||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||| |
Sbjct: 120 ggaaatcgcgagacgaatcttttgagtctaattagcccatgatttgccataagtgctata 61
Query: 106 gtaacccacatgtgctaatggtggattaattagtctcaaaagattcgt 153
| |||||||||||||||||| | ||||||||| ||||||||||||||
Sbjct: 60 gcaacccacatgtgctaatgacgaattaattaggctcaaaagattcgt 13
Score = 60.0 bits (30), Expect = 7e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 46 ggaaatcacgagacgaatcttttgagcctaatta 79
||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggaaatcacaagacgaatcttttgagcctaatta 34
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 131 bits (66), Expect = 2e-31
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 56 agacgaatcttttgagcctaattagtccatgattagccataagtgctacagtaacccaca 115
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 12 agacgaatcttttgagcctaattagtccatgattagttataagtgctacagtaacccgta 71
Query: 116 tgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttcc 165
|||||||||| ||||||||||| ||||| |||||| | || ||||||||
Sbjct: 72 tgtgctaatgacggattaattaggctcaagagattcatctcgcggtttcc 121
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 125 bits (63), Expect = 1e-29
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 44 atggaaatcacgagacgaatcttttgagcctaattagtccatgattagccataagtgcta 103
||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 78 atggaaatcgcgagacgaatcttttgagcctaattagtctatgattaaccataagtgcta 19
Query: 104 cagtaacccacatgt 118
|||||||||||||||
Sbjct: 18 cagtaacccacatgt 4
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 85 tgattagccataagtgctacagtaacccacatgtgct 121
|||||| ||||| |||||| |||||||||||||||||
Sbjct: 103 tgattaaccataggtgctatagtaacccacatgtgct 139
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 99.6 bits (50), Expect = 8e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 52 cacgagacgaatcttttgagcctaattagtccatgattagccataagtgctacagtaacc 111
|||||||| ||||||||||| ||||||||||||||||||||||||||||||| || ||||
Sbjct: 1 cacgagacaaatcttttgagtctaattagtccatgattagccataagtgctatagcaacc 60
Query: 112 cacatg 117
||||||
Sbjct: 61 cacatg 66
>49010_osa-miR445c:pmrd
Length = 260
Score = 58.0 bits (29), Expect = 3e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 51 tcacgagacgaatcttttgagcctaattagtccatgattag 91
|||||||||||||||||| |||||||||| ||||||||||
Sbjct: 176 tcacgagacgaatcttttaagcctaattacaccatgattag 136
>49015_osa-miR445h:pmrd
Length = 277
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 54 cgagacgaatcttttgagcctaattagtccatgattag 91
|||||||||||||||||| ||||||| ||||||||||
Sbjct: 181 cgagacgaatcttttgagtctaattacaccatgattag 144
>49013_osa-miR445f:pmrd
Length = 305
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 54 cgagacgaatcttttgagcctaattagtccatgattag 91
|||||||||||||||||| ||||||| ||||||||||
Sbjct: 196 cgagacgaatcttttgagtctaattacaccatgattag 159
>49012_osa-miR445e:pmrd
Length = 265
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 54 cgagacgaatcttttgagcctaattagtccatgattag 91
|||||||||||||||||| ||||||| ||||||||||
Sbjct: 175 cgagacgaatcttttgagtctaattacaccatgattag 138
>49009_osa-miR445b:pmrd
Length = 264
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 54 cgagacgaatcttttgagcctaattagtccatgattag 91
|||||||||||||||||| ||||||| ||||||||||
Sbjct: 174 cgagacgaatcttttgagtctaattacaccatgattag 137
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 54 cgagacgaatcttttgagcctaattagtccatgatta 90
|||||| ||||| ||||||||||||| ||||||||||
Sbjct: 12 cgagacaaatctattgagcctaattaatccatgatta 48
>49008_osa-miR445a:pmrd
Length = 268
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 54 cgagacgaatcttttgagcctaattagtccatgatt 89
|||||||||||||||||| ||||||| ||||||||
Sbjct: 185 cgagacgaatcttttgagtctaattacaccatgatt 150
>49004_osa-miR442:pmrd
Length = 233
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 54 cgagacgaatcttttgagcctaattagtccatgat 88
||||||||||||||| ||||||||| ||||||||
Sbjct: 66 cgagacgaatcttttaagcctaattgctccatgat 100
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 44.1 bits (22), Expect = 4e-05
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 113 acatgtgctaatggtggattaattagtctcaaaagattcgtttcacggtttccaggcg 170
|||| |||||||| |||||||||||| || || | |||||| || |||||| ||||||
Sbjct: 79 acatttgctaatgatggattaattaggcttaataaattcgtctcgcggtttacaggcg 136
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 46 ggaaatcacgagacgaatcttttgagcctaatt 78
||||||| ||||||||||||||| ||||||||
Sbjct: 12 ggaaatcgcgagacgaatcttttaggcctaatt 44
>49014_osa-miR445g:pmrd
Length = 275
Score = 40.1 bits (20), Expect = 6e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 56 agacgaatcttttgagcctaattagtccatgattag 91
|||||||||||||||| |||||| ||||||||||
Sbjct: 178 agacgaatcttttgagtttaattacaccatgattag 143