miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46857_ahy-miR157k:pmrd
          Length = 139

 Score =  184 bits (93), Expect = 9e-48
 Identities = 102/105 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   attataaatgttgacagaagagagagagcagaacccgagaaatggtcaaagaatctttta 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 11  attataaatgttgacagaagagagagagcacaacccgagaaatggtcaaagaatctttta 70

                                                        
Query: 61  cctttggtgggagtgtgctctctattcttctgtcatcatctttat 105
           |||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 71  cctttgttgggagtgtgctctctactcttctgtcatcatctttat 115




>48529_gma-miR156b:pmrd
          Length = 120

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 79/93 (84%), Gaps = 1/93 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   atgttgacagaagagagagagcagaacccgagaaatggtcaaagaatcttttacctttgg 67
           ||||||||||||||||||||||| |||||| | |||||  |||| |   ||| |||||| 
Sbjct: 17  atgttgacagaagagagagagcacaacccg-ggaatggctaaaggagtctttgcctttgt 75

                                            
Query: 68  tgggagtgtgctctctattcttctgtcatcatc 100
           ||||||||||| |||| ||| ||||||||||||
Sbjct: 76  tgggagtgtgccctctcttcctctgtcatcatc 108




>54766_vvi-miR156a:pmrd
          Length = 104

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 68  tgggagtgtgctctctattcttctgtcatcatc 100
           |||||||||||||||| ||||||||||||||||
Sbjct: 65  tgggagtgtgctctctcttcttctgtcatcatc 97



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 8  atgttgacagaagagagagagcagaaccc 36
          ||||||||||||||||| ||||| |||||
Sbjct: 7  atgttgacagaagagagggagcacaaccc 35




>48676_lja-miR157b:pmrd
          Length = 86

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 74/87 (85%), Gaps = 2/87 (2%)
 Strand = Plus / Plus

                                                                      
Query: 11 ttgacagaagagagagagcagaacccgagaaatggtcaaaga-atcttttacctttggtg 69
          |||||||||||||||||||| ||||| || |||||| ||||| |   ||| | |||| ||
Sbjct: 1  ttgacagaagagagagagcacaaccc-aggaatggtgaaagagagtctttgcttttgttg 59

                                     
Query: 70 ggagtgtgctctctattcttctgtcat 96
          |||||||||||||  ||||||||||||
Sbjct: 60 ggagtgtgctctcccttcttctgtcat 86




>54774_vvi-miR156i:pmrd
          Length = 103

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 74 tgtgctctctattcttctgtcatca 98
          |||||||||||||||||||||||||
Sbjct: 69 tgtgctctctattcttctgtcatca 93




>46903_aqc-miR529:pmrd
          Length = 125

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 8  atgttgacagaagagagagagcagaaccc 36
          ||||||||||||||||||||||| |||||
Sbjct: 14 atgttgacagaagagagagagcacaaccc 42



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 63  tttggtgggagtgtgctctctattcttctgtcatcatc 100
           |||| |||||||||||||| |  |||||||||||||||
Sbjct: 69  tttgttgggagtgtgctctttgctcttctgtcatcatc 106




>54570_smo-miR156b:pmrd
          Length = 112

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 75  gtgctctctattcttctgtcatca 98
           ||||||||||||||||||||||||
Sbjct: 80  gtgctctctattcttctgtcatca 103




>48631_gra-miR157b:pmrd
          Length = 91

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 74  tgtgctctctattcttctgtcatcatc 100
           |||||||||||| ||||||||||||||
Sbjct: 65  tgtgctctctatgcttctgtcatcatc 91




>48532_gma-miR156e:pmrd
          Length = 124

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 74  tgtgctctctattcttctgtcatcatc 100
           ||||||||||| |||||||||||||||
Sbjct: 83  tgtgctctctagtcttctgtcatcatc 109




>48811_osa-miR156k:pmrd
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 12 tgacagaagagagagagcagaacccg 37
          ||||||||||||||||||| ||||||
Sbjct: 11 tgacagaagagagagagcacaacccg 36




>46927_ath-miR157d:pmrd
          Length = 221

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 74  tgtgctctctattcttctgtcatcatcttt 103
           |||||||||||| |||||||||||| ||||
Sbjct: 172 tgtgctctctatgcttctgtcatcaccttt 201




>46917_ath-miR156h:pmrd
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 6  aaatgttgacagaagagagagagcagaacc 35
          |||||||||||||||| |||||||| ||||
Sbjct: 6  aaatgttgacagaagaaagagagcacaacc 35




>54928_zma-miR157m:pmrd
          Length = 189

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  gttgacagaagagagagagca 30
           |||||||||||||||||||||
Sbjct: 168 gttgacagaagagagagagca 188




>54926_zma-miR156q:pmrd
          Length = 189

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  gttgacagaagagagagagca 30
           |||||||||||||||||||||
Sbjct: 168 gttgacagaagagagagagca 188




>54925_zma-miR156p:pmrd
          Length = 189

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  gttgacagaagagagagagca 30
           |||||||||||||||||||||
Sbjct: 168 gttgacagaagagagagagca 188




>54920_zma-miR156j:pmrd
          Length = 125

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 tgacagaagagagagagcagaaccc 36
          ||||||||||||||||||| |||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45




>54662_stu-miR157b:pmrd
          Length = 617

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  gttgacagaagagagagagca 30
           |||||||||||||||||||||
Sbjct: 530 gttgacagaagagagagagca 550




>54627_sof-miR156u:pmrd
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 gttgacagaagagagagagca 30
          |||||||||||||||||||||
Sbjct: 61 gttgacagaagagagagagca 81




>54572_smo-miR156d:pmrd
          Length = 103

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 74 tgtgctctctattcttctgtcatca 98
          ||||||||||||||||||| |||||
Sbjct: 68 tgtgctctctattcttctgccatca 92




>54396_sbi-miR156d:pmrd
          Length = 125

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 tgacagaagagagagagcagaaccc 36
          ||||||||||||||||||| |||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45




>52045_ptc-miRf10223-akr:pmrd
          Length = 86

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 74 tgtgctctctattcttctgtcatca 98
          |||||||||||| ||||||||||||
Sbjct: 62 tgtgctctctatgcttctgtcatca 86




>51600_ptc-miR156j:pmrd
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 74 tgtgctctctattcttctgtcatca 98
          |||||||||||| ||||||||||||
Sbjct: 70 tgtgctctctatgcttctgtcatca 94




>51598_ptc-miR156h:pmrd
          Length = 103

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 74 tgtgctctctattcttctgtcatca 98
          ||||||||||| |||||||||||||
Sbjct: 73 tgtgctctctagtcttctgtcatca 97




>51597_ptc-miR156g:pmrd
          Length = 103

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 74 tgtgctctctattcttctgtcatca 98
          ||||||||||| |||||||||||||
Sbjct: 73 tgtgctctctagtcttctgtcatca 97




>48697_mtr-miR156h:pmrd
          Length = 94

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 74 tgtgctctctattcttctgtcatca 98
          |||||||| ||||||||||||||||
Sbjct: 68 tgtgctctttattcttctgtcatca 92




>48695_mtr-miR156e:pmrd
          Length = 172

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 74  tgtgctctctattcttctgtcatca 98
           |||||||||||| ||||||||||||
Sbjct: 146 tgtgctctctatgcttctgtcatca 170




>48688_mdo-miR156a:pmrd
          Length = 109

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  gttgacagaagagagagagca 30
           |||||||||||||||||||||
Sbjct: 88  gttgacagaagagagagagca 108




>48653_hvv-miR156b:pmrd
          Length = 86

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 gttgacagaagagagagagca 30
          |||||||||||||||||||||
Sbjct: 65 gttgacagaagagagagagca 85




>48538_gma-miR157r:pmrd
          Length = 147

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  gttgacagaagagagagagca 30
           |||||||||||||||||||||
Sbjct: 126 gttgacagaagagagagagca 146




>48531_gma-miR156d:pmrd
          Length = 151

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 74  tgtgctctctattcttctgtcatca 98
           |||||||||||| ||||||||||||
Sbjct: 110 tgtgctctctatacttctgtcatca 134




>48305_bdi-miR156:pmrd
          Length = 147

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  gttgacagaagagagagagca 30
           |||||||||||||||||||||
Sbjct: 99  gttgacagaagagagagagca 119




>46928_ath-miR157m:pmrd
          Length = 50

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 gttgacagaagagagagagca 30
          |||||||||||||||||||||
Sbjct: 29 gttgacagaagagagagagca 49




>54909_zel-miR157:pmrd
          Length = 69

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ttgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagagagagagca 20




>54663_stu-miR157c:pmrd
          Length = 189

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ttgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagagagagagca 20




>54531_sin-miR157:pmrd
          Length = 83

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ttgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagagagagagca 20




>54372_pts-miR157:pmrd
          Length = 356

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  ttgacagaagagagagagca 30
           ||||||||||||||||||||
Sbjct: 336 ttgacagaagagagagagca 355




>54371_pts-miR156c:pmrd
          Length = 85

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 12 tgacagaagagagagagcagaacccgag 39
          ||||||||||||||||||| || |||||
Sbjct: 1  tgacagaagagagagagcacaatccgag 28




>54370_pts-miR156b:pmrd
          Length = 356

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  ttgacagaagagagagagca 30
           ||||||||||||||||||||
Sbjct: 336 ttgacagaagagagagagca 355




>54365_ptr-miR156:pmrd
          Length = 373

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  ttgacagaagagagagagca 30
           ||||||||||||||||||||
Sbjct: 353 ttgacagaagagagagagca 372




>52807_ptc-miRf10985-akr:pmrd
          Length = 87

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 74 tgtgctctctattcttctgtcatc 97
          ||||||||||| ||||||||||||
Sbjct: 64 tgtgctctctagtcttctgtcatc 87




>51321_par-miR157:pmrd
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ttgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagagagagagca 20




>51319_pam-miR157:pmrd
          Length = 216

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ttgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagagagagagca 20




>48787_nbe-miR157b:pmrd
          Length = 207

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ttgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagagagagagca 20




>48786_nbe-miR157a:pmrd
          Length = 169

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  ttgacagaagagagagagca 30
           ||||||||||||||||||||
Sbjct: 149 ttgacagaagagagagagca 168




>48785_nbe-miR156b:pmrd
          Length = 169

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  ttgacagaagagagagagca 30
           ||||||||||||||||||||
Sbjct: 149 ttgacagaagagagagagca 168




>48684_lsa-miR157:pmrd
          Length = 357

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ttgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagagagagagca 20




>48643_han-miR157b:pmrd
          Length = 364

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ttgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagagagagagca 20




>48633_gra-miR157d:pmrd
          Length = 89

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ttgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 69 ttgacagaagagagagagca 88




>48632_gra-miR157c:pmrd
          Length = 183

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ttgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagagagagagca 20




>48418_can-miR157:pmrd
          Length = 155

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 ttgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 1  ttgacagaagagagagagca 20




>46926_ath-miR157c:pmrd
          Length = 217

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 74  tgtgctctctattcttctgtcatcatctttat 105
           |||||||||||| ||||||||| || ||||||
Sbjct: 167 tgtgctctctatacttctgtcaccacctttat 198




>46862_aqc-miR156b:pmrd
          Length = 83

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 74 tgtgctctctattcttctgtcatc 97
          |||||||||||| |||||||||||
Sbjct: 60 tgtgctctctatgcttctgtcatc 83