miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54697_tae-miR1122:pmrd
          Length = 295

 Score =  121 bits (61), Expect = 3e-28
 Identities = 126/145 (86%), Gaps = 2/145 (1%)
 Strand = Plus / Minus

                                                                       
Query: 97  gtactccctctgttcctaaatataagtcct-ttaaagattccaccagggnactacatacg 155
           |||| ||||||||||||||||||| | | | ||| ||||||||| | || ||||||||||
Sbjct: 293 gtacaccctctgttcctaaatatatgccttcttagagattccactatgg-actacatacg 235

                                                                       
Query: 156 gagcaaaatgagtcaatctacactctaaagtatatctttgtacatccgtatgtagtttgt 215
            || ||||||||| ||||||||||||||| ||| ||| | ||||||||||||||||||||
Sbjct: 234 aagtaaaatgagtgaatctacactctaaaatatgtctatatacatccgtatgtagtttgt 175

                                    
Query: 216 agtgtaatgtctaaaaagacatata 240
           |||| ||| ||||||||||| ||||
Sbjct: 174 agtggaatctctaaaaagacttata 150



 Score = 67.9 bits (34), Expect = 4e-12
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 50  tatatagacatactttacagtgtagattcattcattttgcttcgtatgta 99
           |||||||||||| |||| |||||||||||| ||||||| |||||||||||
Sbjct: 193 tatatagacatattttagagtgtagattcactcattttacttcgtatgta 242



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 97  gtactccctctgttcctaaata 118
           ||||||||||||||||||||||
Sbjct: 5   gtactccctctgttcctaaata 26



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 202 cgtatgtagtttgtagtgtaatgtctaaaaagacatatatttaggaacggagg 254
           ||||||||||   ||||| ||| ||||| ||| ||||||||||||||| ||||
Sbjct: 235 cgtatgtagtccatagtggaatctctaagaaggcatatatttaggaacagagg 287




>54701_tae-miR1126:pmrd
          Length = 164

 Score = 77.8 bits (39), Expect = 4e-15
 Identities = 131/159 (82%), Gaps = 2/159 (1%)
 Strand = Plus / Plus

                                                                       
Query: 97  gtactccctctgttcctaaatataagtcctt-taaagattccaccagggnactacatacg 155
           |||||| ||| ||||||||||||||||| || || | ||||||| | || ||||||||||
Sbjct: 1   gtactctctccgttcctaaatataagtctttatagaaattccactatgg-actacatacg 59

                                                                       
Query: 156 gagcaaaatgagtcaatctacactctaaagtatatctttgtacatccgtatgtagtttgt 215
           ||||||||| | | ||||||||||||||| |  ||||   ||||| ||||||| |||  |
Sbjct: 60  gagcaaaataaatgaatctacactctaaaatgcatctacatacattcgtatgtggttcat 119

                                                  
Query: 216 agtgtaatgtctaaaaagacatatatttaggaacggagg 254
           |||  ||| |||| |||||| ||||||||| ||||||||
Sbjct: 120 agtaaaatctctacaaagacttatatttagaaacggagg 158



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 200 tccgtatgtagtttgtagtgtaatgtctaaaaagacatatatttaggaacggag 253
           ||||||||||||   ||||| ||| |||| |||||| |||||||||||||||||
Sbjct: 61  tccgtatgtagtccatagtggaatttctataaagacttatatttaggaacggag 8



 Score = 50.1 bits (25), Expect = 8e-07
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                               
Query: 63 tttacagtgtagattcattcattttgcttcgtatgta 99
          |||| |||||||||||||| |||||||| ||||||||
Sbjct: 88 tttagagtgtagattcatttattttgctccgtatgta 52



 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 3  ctccgttcctaaatataagtcttt 26
          ||||||||||||||||||||||||
Sbjct: 8  ctccgttcctaaatataagtcttt 31



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 1   ccctccgttcctaaatataagtcttt 26
           ||||||||| ||||||||||||||||
Sbjct: 159 ccctccgtttctaaatataagtcttt 134




>50531_osa-miRf11316-akr:pmrd
          Length = 82

 Score = 50.1 bits (25), Expect = 8e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 98  tactccctctgttcctaaatataag 122
           |||||||||||||||||||||||||
Sbjct: 77  tactccctctgttcctaaatataag 53



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 97  gtactccctctgttcctaaatataag 122
           |||||||||| |||||||||||||||
Sbjct: 5   gtactccctccgttcctaaatataag 30



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ccctccgttcctaaatataag 21
          |||||||||||||||||||||
Sbjct: 10 ccctccgttcctaaatataag 30