miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50412_osa-miRf11197-akr:pmrd
Length = 130
Score = 71.9 bits (36), Expect = 2e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 43 gacgttcgagatttgtccacgtcatcacaagtaaaaagtttactcatggatttatt 98
||||||||||||| | |||||||||||| |||||||| ||||||||| ||||||||
Sbjct: 12 gacgttcgagattcgaccacgtcatcacgagtaaaaattttactcatagatttatt 67
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 42 ggacgttcgagatttgtccacgtcatcacaagtaaaaa 79
|||||| ||||||| ||||||||||||| ||||||||
Sbjct: 120 ggacgtccgagattcgtccacgtcatcattagtaaaaa 83
>49197_osa-miR2862:pmrd
Length = 221
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 50 gagatttgtccacgtcatcacaagtaaaaagtttactc 87
|||||| |||||||||||||| |||||||| |||||||
Sbjct: 175 gagattcgtccacgtcatcacgagtaaaaattttactc 138
>50082_osa-miRf10867-akr:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 4e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 43 gacgttcgagatttgtccacgtcatcacaagtaaaaagtttactcatggattta 96
||||| ||||||| |||||||||||| |||| ||| |||||||| |||||||
Sbjct: 117 gacgtccgagattcatccacgtcatcatgagtagaaattttactcacggattta 64
>49047_osa-miR811c:pmrd
Length = 159
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 42 ggacgttcgagatttgtccacgtca 66
|||||||||||||| ||||||||||
Sbjct: 19 ggacgttcgagattcgtccacgtca 43