miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q6ZIB9|GDT14_ORYSJ GDT1-like protein 4 OS=Oryza sativa subsp.
japonica GN=Os08g0528500 PE=2 SV=1
Length = 282
Score = 82.8 bits (203), Expect = 6e-16
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = -2
Query: 208 LKAVVHVI*VLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR 62
L A+V V+ +LSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR
Sbjct: 112 LSALV-VMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR 159
>sp|A2YXC7|GDT14_ORYSI GDT1-like protein 4 OS=Oryza sativa subsp.
indica GN=OsI_29993 PE=3 SV=1
Length = 281
Score = 82.8 bits (203), Expect = 6e-16
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = -2
Query: 208 LKAVVHVI*VLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR 62
L A+V V+ +LSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR
Sbjct: 111 LSALV-VMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR 158
>sp|Q93Y38|GDT13_ARATH GDT1-like protein 3 OS=Arabidopsis thaliana
GN=At5g36290 PE=2 SV=1
Length = 293
Score = 82.8 bits (203), Expect = 6e-16
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = -2
Query: 202 AVVHVI*VLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR 62
+ + V+ +LSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR
Sbjct: 123 SALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR 169
>sp|Q2R4J1|GDT13_ORYSJ GDT1-like protein 3 OS=Oryza sativa subsp.
japonica GN=Os11g0472500 PE=2 SV=1
Length = 279
Score = 81.3 bits (199), Expect = 2e-15
Identities = 39/47 (82%), Positives = 44/47 (93%)
Frame = -2
Query: 202 AVVHVI*VLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR 62
+ ++V+ VLSTGLGRIVPNLISRKHTNSAATVLY FFGLRLLYIAW+
Sbjct: 110 SALYVMTVLSTGLGRIVPNLISRKHTNSAATVLYLFFGLRLLYIAWK 156
>sp|A2ZE50|GDT13_ORYSI GDT1-like protein 3 OS=Oryza sativa subsp.
indica GN=OsI_36063 PE=3 SV=1
Length = 279
Score = 81.3 bits (199), Expect = 2e-15
Identities = 39/47 (82%), Positives = 44/47 (93%)
Frame = -2
Query: 202 AVVHVI*VLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR 62
+ ++V+ VLSTGLGRIVPNLISRKHTNSAATVLY FFGLRLLYIAW+
Sbjct: 110 SALYVMTVLSTGLGRIVPNLISRKHTNSAATVLYLFFGLRLLYIAWK 156
