miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q54S31|PEX10_DICDI Peroxisome biogenesis factor 10
OS=Dictyostelium discoideum GN=pex10 PE=3 SV=2
Length = 374
Score = 58.5 bits (140), Expect = 4e-08
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Frame = +2
Query: 113 CDDAGEADQSSSKKRRTGQQLSS-------DVQSDESKEVKLTCAICISTMEEETSTICG 271
C+ GE D K +Q+ S D +++ +E + C +C+ T+TICG
Sbjct: 279 CNGDGEEDNQDLNKDIKIEQVDSVINNNNQDQNNNQEEEEEQKCTLCLEVRTHTTATICG 338
Query: 272 HIFCKKCITNAIHRWKRCPTCRKKLAINNIHRIY 373
H+FC CIT + ++CP CR ++I +Y
Sbjct: 339 HLFCWHCITEWCNNKEQCPVCRCPISIRTCVPLY 372
>sp|Q5A4X0|BRE1_CANAL E3 ubiquitin-protein ligase BRE1 OS=Candida
albicans GN=BRE1 PE=3 SV=1
Length = 681
Score = 54.3 bits (129), Expect = 7e-07
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 149 KKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAI-HRWKRC 325
K T L D Q E+ C++C ++ T+CGH+FC KC + R +RC
Sbjct: 605 KTNNTNSLLQEDEQQLEALRSIAKCSVCSKNWKDTAITVCGHVFCSKCTQERLAARLRRC 664
Query: 326 PTCRKKLAINNIHRIYI 376
P+C + + N++ I++
Sbjct: 665 PSCNRGFSANDLLSIHL 681
>sp|Q9R1A8|RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2 OS=Mus
musculus GN=Rfwd2 PE=1 SV=2
Length = 733
Score = 53.1 bits (126), Expect = 1e-06
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 140 SSSKKRRTGQQLSSDV-QSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRW 316
SSS+KR L + + S E K C IC +EE T CGH FC KCI ++
Sbjct: 110 SSSRKRPLLVPLCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDN 169
Query: 317 KRCPTCRKKLAINNIHRIY 373
RCP C ++NI +Y
Sbjct: 170 NRCPKC--NYVVDNIDHLY 186
>sp|O64425|RMA1_ARATH E3 ubiquitin-protein ligase RMA1
OS=Arabidopsis thaliana GN=RMA1 PE=1 SV=1
Length = 249
Score = 52.8 bits (125), Expect = 2e-06
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Frame = +2
Query: 152 KRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCI-----------T 298
K + + ++ V SD++ + C IC+ +++E T+CGH+FC CI +
Sbjct: 25 KSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTS 84
Query: 299 NAIHRWKRCPTCRKKLAINNIHRIY 373
+ R ++CP C+ K++ + + +Y
Sbjct: 85 DEYQRHRQCPVCKSKVSHSTLVPLY 109
>sp|Q8NHY2|RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2 OS=Homo
sapiens GN=RFWD2 PE=1 SV=1
Length = 731
Score = 52.8 bits (125), Expect = 2e-06
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 140 SSSKKRRTGQQLSSD-VQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRW 316
S S+KR L + + S E K C IC +EE T CGH FC KCI ++
Sbjct: 108 SGSRKRPLLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDN 167
Query: 317 KRCPTCRKKLAINNIHRIY 373
RCP C ++NI +Y
Sbjct: 168 NRCPKC--NYVVDNIDHLY 184
>sp|Q6BWW6|BRE1_DEBHA E3 ubiquitin-protein ligase BRE1
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=BRE1 PE=3 SV=2
Length = 691
Score = 52.8 bits (125), Expect = 2e-06
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = +2
Query: 128 EADQSSSKKRRTGQQLSSDVQSDESKEVKLT----CAICISTMEEETSTICGHIFCKKCI 295
++ +S KK +T SS +Q DE + L C++C ++ T+CGH+FC C
Sbjct: 605 KSTESLLKKYKTNNT-SSILQEDERQLEALRSIAKCSVCSKNWKDTAITVCGHVFCSGCT 663
Query: 296 TNAI-HRWKRCPTCRKKLAINNIHRIYI 376
+ R +RCPTC K + N++ I++
Sbjct: 664 QERLAARLRRCPTCNKGFSANDLLSIHL 691
>sp|O88846|RNF4_RAT E3 ubiquitin ligase RNF4 OS=Rattus norvegicus
GN=Rnf4 PE=1 SV=1
Length = 194
Score = 52.4 bits (124), Expect = 3e-06
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Frame = +2
Query: 215 LTCAICISTMEEET-------STICGHIFCKKCITNAIHRWKRCPTCRKKLAINNIHRIY 373
++C IC+ E ST CGH+FC +C+ +++ CPTCRKK+ H IY
Sbjct: 134 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 193
Query: 374 I 376
I
Sbjct: 194 I 194
>sp|Q9QZS2|RNF4_MOUSE E3 ubiquitin ligase RNF4 OS=Mus musculus
GN=Rnf4 PE=1 SV=1
Length = 194
Score = 52.4 bits (124), Expect = 3e-06
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Frame = +2
Query: 215 LTCAICISTMEEET-------STICGHIFCKKCITNAIHRWKRCPTCRKKLAINNIHRIY 373
++C IC+ E ST CGH+FC +C+ +++ CPTCRKK+ H IY
Sbjct: 134 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 193
Query: 374 I 376
I
Sbjct: 194 I 194
>sp|P78317|RNF4_HUMAN E3 ubiquitin ligase RNF4 OS=Homo sapiens
GN=RNF4 PE=1 SV=1
Length = 190
Score = 52.4 bits (124), Expect = 3e-06
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Frame = +2
Query: 215 LTCAICISTMEEET-------STICGHIFCKKCITNAIHRWKRCPTCRKKLAINNIHRIY 373
++C IC+ E ST CGH+FC +C+ +++ CPTCRKK+ H IY
Sbjct: 130 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 189
Query: 374 I 376
I
Sbjct: 190 I 190
>sp|Q86KL1|BRE1_DICDI Probable E3 ubiquitin-protein ligase bre1
OS=Dictyostelium discoideum GN=bre1 PE=3 SV=1
Length = 1080
Score = 52.4 bits (124), Expect = 3e-06
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = +2
Query: 116 DDAGEADQSSSKKRRTGQQLSSDVQSDESKEVKLT-----CAICISTMEEETSTICGHIF 280
+ A A+ +++ +++ S +E+KL C IC + C H+F
Sbjct: 988 EKATSANNNNNNNNNNNNNNNNNNSSSSEEELKLINQRLRCTICNDRQKNYVIAKCFHVF 1047
Query: 281 CKKCI-TNAIHRWKRCPTCRKKLAINNIHRIY 373
CK+CI +N R +RCP+C + A ++H+IY
Sbjct: 1048 CKECIYSNIDTRKRRCPSCNRAFAETDVHQIY 1079
>sp|Q5RAU7|BRE1B_PONAB E3 ubiquitin-protein ligase BRE1B OS=Pongo
abelii GN=RNF40 PE=2 SV=1
Length = 1001
Score = 52.4 bits (124), Expect = 3e-06
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 116 DDAGEADQSSSKKRRTGQQLSSD-VQSDESKEVK--LTCAICISTMEEETSTICGHIFCK 286
+D + K+R+ +D + +E KE K LTC C + ++ T C H+FC
Sbjct: 910 EDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCF 969
Query: 287 KCITNAIH-RWKRCPTCRKKLAINNIHRIYIS 379
+C+ R ++CP C ++ HRIYIS
Sbjct: 970 ECVRGRYEARQRKCPKCNAAFGAHDFHRIYIS 1001
>sp|Q4R7K7|BRE1B_MACFA E3 ubiquitin-protein ligase BRE1B OS=Macaca
fascicularis GN=RNF40 PE=2 SV=1
Length = 1001
Score = 52.4 bits (124), Expect = 3e-06
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 116 DDAGEADQSSSKKRRTGQQLSSD-VQSDESKEVK--LTCAICISTMEEETSTICGHIFCK 286
+D + K+R+ +D + +E KE K LTC C + ++ T C H+FC
Sbjct: 910 EDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCF 969
Query: 287 KCITNAIH-RWKRCPTCRKKLAINNIHRIYIS 379
+C+ R ++CP C ++ HRIYIS
Sbjct: 970 ECVRGRYEARQRKCPKCNAAFGAHDFHRIYIS 1001
>sp|O75150|BRE1B_HUMAN E3 ubiquitin-protein ligase BRE1B OS=Homo
sapiens GN=RNF40 PE=1 SV=4
Length = 1001
Score = 52.4 bits (124), Expect = 3e-06
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 116 DDAGEADQSSSKKRRTGQQLSSD-VQSDESKEVK--LTCAICISTMEEETSTICGHIFCK 286
+D + K+R+ +D + +E KE K LTC C + ++ T C H+FC
Sbjct: 910 EDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCF 969
Query: 287 KCITNAIH-RWKRCPTCRKKLAINNIHRIYIS 379
+C+ R ++CP C ++ HRIYIS
Sbjct: 970 ECVRGRYEARQRKCPKCNAAFGAHDFHRIYIS 1001
>sp|Q8CJB9|BRE1B_RAT E3 ubiquitin-protein ligase BRE1B OS=Rattus
norvegicus GN=Rnf40 PE=1 SV=1
Length = 1002
Score = 52.0 bits (123), Expect = 3e-06
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 116 DDAGEADQSSSKKRRTGQQLSSD-VQSDESKEVK--LTCAICISTMEEETSTICGHIFCK 286
+D + K+R+ +D + +E KE K LTC C + ++ T C H+FC
Sbjct: 911 EDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCF 970
Query: 287 KCITNAIH-RWKRCPTCRKKLAINNIHRIYIS 379
+C+ R ++CP C ++ HR+YIS
Sbjct: 971 ECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS 1002
>sp|Q3U319|BRE1B_MOUSE E3 ubiquitin-protein ligase BRE1B OS=Mus
musculus GN=Rnf40 PE=2 SV=2
Length = 1001
Score = 52.0 bits (123), Expect = 3e-06
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 116 DDAGEADQSSSKKRRTGQQLSSD-VQSDESKEVK--LTCAICISTMEEETSTICGHIFCK 286
+D + K+R+ +D + +E KE K LTC C + ++ T C H+FC
Sbjct: 910 EDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCF 969
Query: 287 KCITNAIH-RWKRCPTCRKKLAINNIHRIYIS 379
+C+ R ++CP C ++ HR+YIS
Sbjct: 970 ECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS 1001
>sp|Q9P3U8|YJ95_SCHPO Uncharacterized RING finger protein C548.05c
OS=Schizosaccharomyces pombe (strain ATCC 38366 / 972)
GN=SPCC548.05c PE=2 SV=1
Length = 468
Score = 51.6 bits (122), Expect = 4e-06
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +2
Query: 140 SSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWK 319
S+S+ ++ + +++ + + L C IC ++ +T CGH +C +C+ N + K
Sbjct: 58 SNSENKKQIPDTKTLLETFQKIKKTLECPICTEALQRPFTTHCGHTYCYECLLNWLKESK 117
Query: 320 RCPTCRKKL 346
CPTCR+KL
Sbjct: 118 SCPTCRQKL 126
>sp|Q00940|PEX10_PICAN Peroxisome biogenesis factor 10 OS=Pichia
angusta GN=PEX10 PE=3 SV=1
Length = 295
Score = 51.2 bits (121), Expect = 6e-06
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 206 EVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKL 346
E TC +C+S M++ + CGH+FC KC+ + + + CP CR K+
Sbjct: 240 EASRTCMLCLSPMKDPSCGECGHVFCWKCVLDWVKERQECPLCRAKM 286
>sp|B1AUE5|PEX10_MOUSE Peroxisome biogenesis factor 10 OS=Mus
musculus GN=Pex10 PE=2 SV=1
Length = 324
Score = 50.8 bits (120), Expect = 7e-06
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 137 QSSSKKRRTGQQLSSDVQSDESKEVKLT--CAICISTMEEETSTICGHIFCKKCITNAIH 310
Q + K+ R + LS S E + V T C +C+ T+T CGH+FC +CIT +
Sbjct: 241 QRARKEWRLHRNLSHRRSSLEDRAVCRTPLCTLCLEERRHSTATPCGHLFCWECITEWCN 300
Query: 311 RWKRCPTCRKK 343
CP CR+K
Sbjct: 301 TKTECPLCREK 311
>sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING
finger protein 3 OS=Macaca fascicularis GN=LONRF3 PE=2
SV=1
Length = 718
Score = 50.8 bits (120), Expect = 7e-06
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Frame = +2
Query: 2 EEDLELRLGLAVTGRTSAEHNPRRRHGRVPPNKPIVLCDDAGEADQSSSKKRRTGQ---- 169
EE + A + +T +R+H ++ +D G +++S + T Q
Sbjct: 357 EEKWDATSPKAASSKTGKCQEKKRKHCQIESQ------EDTGMPNKASKQDPPTDQGDKP 410
Query: 170 QLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKLA 349
LS + S ++ + L CA+C+ E +T CGH FC KC+ + +CP C+ L+
Sbjct: 411 ALSLPLASFDASD--LECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLS 468
Query: 350 INNIHRIYISSSTG*LFIVVLVAKF 424
R Y + + + L+AKF
Sbjct: 469 QCLASRKYSKN----VIMEELIAKF 489
>sp|Q496Y0|LONF3_HUMAN LON peptidase N-terminal domain and RING
finger protein 3 OS=Homo sapiens GN=LONRF3 PE=1 SV=1
Length = 759
Score = 50.4 bits (119), Expect = 1e-05
Identities = 34/141 (24%), Positives = 64/141 (45%)
Frame = +2
Query: 2 EEDLELRLGLAVTGRTSAEHNPRRRHGRVPPNKPIVLCDDAGEADQSSSKKRRTGQQLSS 181
EE + A + +T +R+H ++ + + + A + D + + + LS
Sbjct: 398 EEKWDATSPKAASSKTGKCQEKKRKHCQIESQEETGMPNKASKQDPPTDQGDKPA--LSL 455
Query: 182 DVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKLAINNI 361
+ S ++ + L CA+C+ E +T CGH FC KC+ + +CP C+ L+
Sbjct: 456 PLASFDASD--LECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLA 513
Query: 362 HRIYISSSTG*LFIVVLVAKF 424
R Y + + + L+AKF
Sbjct: 514 SRKYSKN----VIMEELIAKF 530
>sp|Q1L5Z9|LONF2_HUMAN LON peptidase N-terminal domain and RING
finger protein 2 OS=Homo sapiens GN=LONRF2 PE=2 SV=3
Length = 754
Score = 50.4 bits (119), Expect = 1e-05
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +2
Query: 152 KRRTGQQLSSDVQSDESKEVKLT-----CAICISTMEEETSTICGHIFCKKCITNAIHRW 316
K+ Q S + +++ES+ + L CA+C+ + E +T CGH FC KC+ +
Sbjct: 421 KKDLSLQRSPNSETEESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHA 480
Query: 317 KRCPTCRKKLA 349
CP C+ KL+
Sbjct: 481 PHCPLCKDKLS 491
>sp|Q9CQ29|RN151_MOUSE RING finger protein 151 OS=Mus musculus
GN=Rnf151 PE=1 SV=1
Length = 239
Score = 50.1 bits (118), Expect = 1e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 206 EVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKL 346
+ K C++C ++ T C HIFCKKCI + R CP CRK++
Sbjct: 15 DCKFLCSVCHGVLKRPTRLPCSHIFCKKCIFRWLARQNTCPCCRKEV 61
>sp|Q7XU27|BRE1A_ORYSJ E3 ubiquitin-protein ligase BRE1-like 1
OS=Oryza sativa subsp. japonica GN=BRE1A PE=2 SV=3
Length = 884
Score = 50.1 bits (118), Expect = 1e-05
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 137 QSSSKKRRTGQQLSSDVQSDESKEVK--LTCAICISTMEEETSTICGHIFCKKCITNAI- 307
++SS + + + + E KE + L C IC +E T C H+FC +CI ++
Sbjct: 802 KASSLRAKARESAVLEKLRHEVKEYRGILKCGICHDRQKEVVITKCYHLFCNQCIQKSLG 861
Query: 308 HRWKRCPTCRKKLAINNIHRIYI 376
+R +RCP+C N++ IYI
Sbjct: 862 NRQRRCPSCSLSFGANDVKPIYI 884
>sp|A2XW69|BRE1A_ORYSI E3 ubiquitin-protein ligase BRE1-like 1
OS=Oryza sativa subsp. indica GN=BRE1A PE=3 SV=2
Length = 884
Score = 50.1 bits (118), Expect = 1e-05
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 137 QSSSKKRRTGQQLSSDVQSDESKEVK--LTCAICISTMEEETSTICGHIFCKKCITNAI- 307
++SS + + + + E KE + L C IC +E T C H+FC +CI ++
Sbjct: 802 KASSLRAKARESAVLEKLRHEVKEYRGILKCGICHDRQKEVVITKCYHLFCNQCIQKSLG 861
Query: 308 HRWKRCPTCRKKLAINNIHRIYI 376
+R +RCP+C N++ IYI
Sbjct: 862 NRQRRCPSCSLSFGANDVKPIYI 884
>sp|Q5DTM8|BRE1A_MOUSE E3 ubiquitin-protein ligase BRE1A OS=Mus
musculus GN=Rnf20 PE=1 SV=2
Length = 973
Score = 49.7 bits (117), Expect = 2e-05
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 182 DVQSDESKEVK--LTCAICISTMEEETSTICGHIFCKKCI-TNAIHRWKRCPTCRKKLAI 352
++ +E K+ K LTC C ++ T C H+FC +C+ T R ++CP C
Sbjct: 905 EILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGA 964
Query: 353 NNIHRIYI 376
N+ HRIYI
Sbjct: 965 NDFHRIYI 972
>sp|Q5VTR2|BRE1A_HUMAN E3 ubiquitin-protein ligase BRE1A OS=Homo
sapiens GN=RNF20 PE=1 SV=2
Length = 975
Score = 49.7 bits (117), Expect = 2e-05
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 182 DVQSDESKEVK--LTCAICISTMEEETSTICGHIFCKKCI-TNAIHRWKRCPTCRKKLAI 352
++ +E K+ K LTC C ++ T C H+FC +C+ T R ++CP C
Sbjct: 907 EILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGA 966
Query: 353 NNIHRIYI 376
N+ HRIYI
Sbjct: 967 NDFHRIYI 974
>sp|Q5ZLS3|BRE1A_CHICK E3 ubiquitin-protein ligase BRE1A OS=Gallus
gallus GN=RNF20 PE=2 SV=1
Length = 984
Score = 49.7 bits (117), Expect = 2e-05
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 182 DVQSDESKEVK--LTCAICISTMEEETSTICGHIFCKKCI-TNAIHRWKRCPTCRKKLAI 352
++ +E K+ K LTC C ++ T C H+FC +C+ T R ++CP C
Sbjct: 916 EILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGA 975
Query: 353 NNIHRIYI 376
N+ HRIYI
Sbjct: 976 NDFHRIYI 983
>sp|A2VDP1|BRE1A_BOVIN E3 ubiquitin-protein ligase BRE1A OS=Bos taurus
GN=RNF20 PE=2 SV=1
Length = 975
Score = 49.7 bits (117), Expect = 2e-05
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 182 DVQSDESKEVK--LTCAICISTMEEETSTICGHIFCKKCI-TNAIHRWKRCPTCRKKLAI 352
++ +E K+ K LTC C ++ T C H+FC +C+ T R ++CP C
Sbjct: 907 EILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGA 966
Query: 353 NNIHRIYI 376
N+ HRIYI
Sbjct: 967 NDFHRIYI 974
>sp|Q5ZIR9|RN185_CHICK RING finger protein 185 OS=Gallus gallus
GN=RNF185 PE=2 SV=1
Length = 194
Score = 49.3 bits (116), Expect = 2e-05
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = +2
Query: 137 QSSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRW 316
+SSS +G S+ + +++ C IC+ T ++ ++CGH+FC C +H+W
Sbjct: 13 KSSSTGGTSGSSSSNGAGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPC----LHQW 68
Query: 317 -------KRCPTCRKKLAINNIHRIYISSSTG 391
+ CP C+ ++ + + +Y STG
Sbjct: 69 LETRPNRQVCPVCKAGISRDKVIPLYGRGSTG 100
>sp|Q680I0|ORTH5_ARATH E3 ubiquitin-protein ligase ORTHRUS 5
OS=Arabidopsis thaliana GN=ORTH5 PE=2 SV=1
Length = 623
Score = 49.3 bits (116), Expect = 2e-05
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 128 EADQSSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITN-A 304
EA+++ ++R V +E K++++ C+ICI E +T CGH FC KC A
Sbjct: 98 EAEKAKKRQRLMSGGGDDGVDDEEKKKLEIFCSICIQLPERPVTTPCGHNFCLKCFEKWA 157
Query: 305 IHRWK-RCPTCRKKL 346
+ + K C CR K+
Sbjct: 158 VGQGKLTCMICRSKI 172
>sp|Q9C8E1|ORTH4_ARATH Putative E3 ubiquitin-protein ligase ORTHRUS
4 OS=Arabidopsis thaliana GN=ORTH4 PE=3 SV=1
Length = 622
Score = 49.3 bits (116), Expect = 2e-05
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 128 EADQSSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITN-A 304
EA+++ ++R V +E K++++ C+ICI E +T CGH FC KC A
Sbjct: 98 EAEKAKKRQRLMSGGGDDGVDDEEKKKLEIFCSICIQLPERPVTTPCGHNFCLKCFEKWA 157
Query: 305 IHRWK-RCPTCRKKL 346
+ + K C CR K+
Sbjct: 158 VGQGKLTCMICRSKI 172
>sp|B5DF45|TRAF6_RAT TNF receptor-associated factor 6 OS=Rattus
norvegicus GN=Traf6 PE=2 SV=1
Length = 530
Score = 48.9 bits (115), Expect = 3e-05
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 182 DVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIH-RWKRCPTCRKKLAINN 358
DV+ D E K C IC+ + E T CGH FCK CIT +I +CP + L N
Sbjct: 57 DVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVDNEILLENQ 116
Query: 359 I 361
+
Sbjct: 117 L 117
>sp|Q96EQ8|RN125_HUMAN E3 ubiquitin-protein ligase RNF125 OS=Homo
sapiens GN=RNF125 PE=1 SV=4
Length = 232
Score = 48.9 bits (115), Expect = 3e-05
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +2
Query: 107 VLCDDAGEADQSSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCK 286
VL D+G++ +S+ R ++ + E CA+C+ + + T CGH+FC+
Sbjct: 4 VLSTDSGKSAPASATARALERR-----RDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCR 58
Query: 287 KCITNAI--HRWKRCPTCRKKL 346
CI ++ ++W CP CR L
Sbjct: 59 SCIATSLKNNKW-TCPYCRAYL 79
>sp|Q06554|IRC20_YEAST Uncharacterized ATP-dependent helicase IRC20
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=IRC20 PE=1 SV=1
Length = 1556
Score = 48.9 bits (115), Expect = 3e-05
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 215 LTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKLAINNIHRIYISSST 388
L+C+IC+ +E CGH FCK CI + +CP C+ +I+ ++ +ST
Sbjct: 1237 LSCSICLGEVEIGAIIKCGHYFCKSCILTWLRAHSKCPICKGFCSISEVYNFKFKNST 1294
>sp|P70196|TRAF6_MOUSE TNF receptor-associated factor 6 OS=Mus
musculus GN=Traf6 PE=1 SV=2
Length = 530
Score = 48.5 bits (114), Expect = 4e-05
Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Frame = +2
Query: 122 AGEADQSSSKKRRTGQQLSS--------DVQSDESKEVKLTCAICISTMEEETSTICGHI 277
A D S S TG SS DV+ D E K C IC+ + E T CGH
Sbjct: 29 AAVKDDSVSGSASTGNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHR 88
Query: 278 FCKKCITNAIH-RWKRCPTCRKKLAINNI 361
FCK CI +I +CP + L N +
Sbjct: 89 FCKACIIKSIRDAGHKCPVDNEILLENQL 117
>sp|Q2KHN1|RN151_HUMAN RING finger protein 151 OS=Homo sapiens
GN=RNF151 PE=2 SV=1
Length = 245
Score = 48.5 bits (114), Expect = 4e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 221 CAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKL 346
C++C ++ C HIFCKKCI + R K CP CRK++
Sbjct: 20 CSVCHGVLKRPARLPCSHIFCKKCILRWLARQKTCPCCRKEV 61
>sp|Q2TBT8|RN151_BOVIN RING finger protein 151 OS=Bos taurus
GN=RNF151 PE=2 SV=1
Length = 240
Score = 48.5 bits (114), Expect = 4e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 221 CAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKL 346
C++C ++ C HIFCKKCI + R K CP CRK++
Sbjct: 20 CSVCHGVLKRPVRLPCSHIFCKKCILRWLARQKTCPCCRKEV 61
>sp|Q9SYU4|PEX10_ARATH Peroxisome biogenesis factor 10
OS=Arabidopsis thaliana GN=PEX10 PE=1 SV=1
Length = 381
Score = 48.5 bits (114), Expect = 4e-05
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 200 SKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCR 337
S E C +C+ST + T+T CGH+FC CI + + CP CR
Sbjct: 320 STEAVGKCTLCLSTRQHPTATPCGHVFCWSCIMEWCNEKQECPLCR 365
>sp|Q60YN5|BRE1_CAEBR E3 ubiquitin-protein ligase bre-1
OS=Caenorhabditis briggsae GN=rfp-1 PE=3 SV=1
Length = 828
Score = 48.5 bits (114), Expect = 4e-05
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +2
Query: 152 KRRTGQQLSSDVQSDESKEVK--LTCAICISTMEEETSTICGHIFCKKCITNAIH-RWKR 322
KR Q V + ++++K LTC C + ++ C H+FC+ CI R ++
Sbjct: 751 KRNDSAQTGDQVLQEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRK 810
Query: 323 CPTCRKKLAINNIHRIYI 376
CP C N+ HRI+I
Sbjct: 811 CPKCNSNFGANDFHRIFI 828
>sp|O60858|TRI13_HUMAN E3 ubiquitin-protein ligase TRIM13 OS=Homo
sapiens GN=TRIM13 PE=1 SV=2
Length = 407
Score = 48.1 bits (113), Expect = 5e-05
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Frame = +2
Query: 197 ESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIH------RWK----RCPTCRKKL 346
E E LTC IC S ++ C H FCKKC+ + W+ +CPTCRK+
Sbjct: 2 ELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKET 61
Query: 347 AINNIHRIYISSS 385
+ I+ + ++ S
Sbjct: 62 SATGINSLQVNYS 74
>sp|Q922B6|TRAF7_MOUSE E3 ubiquitin-protein ligase TRAF7 OS=Mus
musculus GN=Traf7 PE=1 SV=1
Length = 594
Score = 48.1 bits (113), Expect = 5e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +2
Query: 197 ESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKLAINNIHRIYI 376
E VKL C +C S ++ T CGH FC++C + ++CP KL + ++ I +
Sbjct: 47 EQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALKS----EKCPVDNAKLTV-VVNNIAV 101
Query: 377 SSSTG*LFI 403
+ G LFI
Sbjct: 102 AEQIGELFI 110
>sp|Q6MFZ5|TRI39_RAT Tripartite motif-containing protein 39
OS=Rattus norvegicus GN=Trim39 PE=3 SV=1
Length = 488
Score = 47.8 bits (112), Expect = 6e-05
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 164 GQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCIT---NAIHRWKRCPTC 334
G +S + E+ +V+ +C++C+ ++E CGH FCK CIT + R CP C
Sbjct: 10 GASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 69
Query: 335 RK 340
RK
Sbjct: 70 RK 71
>sp|Q1XHU0|TRI39_PANTR Tripartite motif-containing protein 39 OS=Pan
troglodytes GN=TRIM39 PE=3 SV=1
Length = 518
Score = 47.8 bits (112), Expect = 6e-05
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 164 GQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCIT---NAIHRWKRCPTC 334
G +S + E+ +V+ +C++C+ ++E CGH FCK CIT + R CP C
Sbjct: 10 GASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 69
Query: 335 RK 340
RK
Sbjct: 70 RK 71
>sp|Q9ESN2|TRI39_MOUSE Tripartite motif-containing protein 39 OS=Mus
musculus GN=Trim39 PE=2 SV=1
Length = 488
Score = 47.8 bits (112), Expect = 6e-05
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 164 GQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCIT---NAIHRWKRCPTC 334
G +S + E+ +V+ +C++C+ ++E CGH FCK CIT + R CP C
Sbjct: 10 GASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 69
Query: 335 RK 340
RK
Sbjct: 70 RK 71
>sp|Q9HCM9|TRI39_HUMAN Tripartite motif-containing protein 39
OS=Homo sapiens GN=TRIM39 PE=1 SV=2
Length = 518
Score = 47.8 bits (112), Expect = 6e-05
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 164 GQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCIT---NAIHRWKRCPTC 334
G +S + E+ +V+ +C++C+ ++E CGH FCK CIT + R CP C
Sbjct: 10 GASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 69
Query: 335 RK 340
RK
Sbjct: 70 RK 71
>sp|Q9CYB0|TRI13_MOUSE E3 ubiquitin-protein ligase TRIM13 OS=Mus
musculus GN=Trim13 PE=2 SV=1
Length = 407
Score = 47.8 bits (112), Expect = 6e-05
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Frame = +2
Query: 197 ESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIH------RWK----RCPTCRKKL 346
E E LTC IC S ++ C H FCKKC+ + W+ +CPTCRK+
Sbjct: 2 ELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKET 61
Query: 347 AINNIHRIYISSS 385
+ ++ + ++ S
Sbjct: 62 SATGVNSLQVNYS 74
>sp|Q6Q0C0|TRAF7_HUMAN E3 ubiquitin-protein ligase TRAF7 OS=Homo
sapiens GN=TRAF7 PE=1 SV=1
Length = 670
Score = 47.8 bits (112), Expect = 6e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +2
Query: 197 ESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKLAINNIHRIYI 376
E VKL C +C S ++ T CGH FC++C + ++CP KL + ++ I +
Sbjct: 123 EQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALKS----EKCPVDNVKLTV-VVNNIAV 177
Query: 377 SSSTG*LFI 403
+ G LFI
Sbjct: 178 AEQIGELFI 186
>sp|Q28DL4|TRAF6_XENTR TNF receptor-associated factor 6 OS=Xenopus
tropicalis GN=traf6 PE=2 SV=1
Length = 558
Score = 47.8 bits (112), Expect = 6e-05
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 182 DVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIH-RWKRCPTCRKKLAINN 358
DV+ D E K C IC+ + E T CGH FCK CI +I +CP + L N
Sbjct: 59 DVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHKCPVDNESLMENQ 118
Query: 359 I 361
+
Sbjct: 119 L 119
>sp|Q62191|RO52_MOUSE E3 ubiquitin-protein ligase TRIM21 OS=Mus
musculus GN=Trim21 PE=1 SV=1
Length = 470
Score = 47.8 bits (112), Expect = 6e-05
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 KLTCAICISTMEEETSTICGHIFCKKCITN-AIHRWKRCPTCRKKLAINNI 361
++TC+IC+ M E S CGH FCK+CI + CP CR++ + N+
Sbjct: 17 EVTCSICLDPMVEPMSIECGHCFCKECIFEVGKNGGSSCPECRQQFLLRNL 67
>sp|Q9FKA7|ORTH1_ARATH E3 ubiquitin-protein ligase ORTHRUS 1
OS=Arabidopsis thaliana GN=ORTH1 PE=1 SV=1
Length = 617
Score = 47.8 bits (112), Expect = 6e-05
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 128 EADQSSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITN-A 304
EA+++ +++ V +E K++++ C+ICI E +T CGH FC KC A
Sbjct: 98 EAEKAKKRQKLMSGGGDDGVDEEEKKKLEIFCSICIQLPERPITTPCGHNFCLKCFEKWA 157
Query: 305 IHRWK-RCPTCRKKL 346
+ + K C CR K+
Sbjct: 158 VGQGKLTCMICRSKI 172
>sp|Q6FXX1|CWC24_CANGA Pre-mRNA-splicing factor CWC24 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=CWC24 PE=3 SV=1
Length = 226
Score = 47.8 bits (112), Expect = 6e-05
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 158 RTGQQLSSDVQSDESKE------VKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWK 319
+ G L++D + DE KE V C +C + E T CGH FC+KC N I K
Sbjct: 138 KAGWTLATDWKIDEQKEETRKEAVPFKCVLCKESYERPVKTNCGHYFCQKCFVNRIKIDK 197
Query: 320 RCPTC 334
C C
Sbjct: 198 SCFIC 202
>sp|Q6DJN2|TRF6B_XENLA TNF receptor-associated factor 6-B OS=Xenopus
laevis GN=traf6-b PE=2 SV=1
Length = 556
Score = 47.4 bits (111), Expect = 8e-05
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +2
Query: 113 CDDAGEADQSSSKKRRTGQQLSS-DVQSDESKEVKLTCAICISTMEEETSTICGHIFCKK 289
CD A S + + +++ DV+ D E K C IC+ + E T CGH FCK
Sbjct: 35 CDSPSTALPSGTPQSLEVEEVQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKA 94
Query: 290 CITNAIH-RWKRCPTCRKKLAINNI 361
CI ++ +CP + L N +
Sbjct: 95 CIVKSLRDAGHKCPVDNEILMENQL 119
>sp|P87176|SLX8_SCHPO E3 ubiquitin-protein ligase complex slx8-rfp
subunit slx8 OS=Schizosaccharomyces pombe (strain ATCC
38366 / 972) GN=slx8 PE=1 SV=1
Length = 269
Score = 47.4 bits (111), Expect = 8e-05
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 221 CAICISTMEEETSTICGHIFCKKCITNAI---HRWKRCPTCRKKLAINNI 361
C IC+ + E + T CGHIFC CI +A+ ++CP CR+K+ N +
Sbjct: 206 CVICLDSPENLSCTPCGHIFCNFCILSALGTTAATQKCPVCRRKVHPNKV 255
>sp|Q95KF1|RN125_MACFA E3 ubiquitin-protein ligase RNF125 OS=Macaca
fascicularis GN=RNF125 PE=2 SV=3
Length = 232
Score = 47.4 bits (111), Expect = 8e-05
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 107 VLCDDAGEADQSSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCK 286
VL D+G++ S+ R ++ E CA+C+ + + T CGH+FC+
Sbjct: 4 VLSSDSGKSAPPSATPRALERR-----GDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCR 58
Query: 287 KCITNAI--HRWKRCPTCRKKL 346
CI ++ ++W CP CR L
Sbjct: 59 SCIATSLKNNKW-TCPYCRAYL 79
>sp|O77666|TRI26_PIG Tripartite motif-containing protein 26 OS=Sus
scrofa GN=TRIM26 PE=3 SV=2
Length = 545
Score = 47.0 bits (110), Expect = 1e-04
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +2
Query: 200 SKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKR----CPTCRKKLAINNIHR 367
S E ++TC+IC+ + + + CGH+FC+ C T+ IH CP C+K NI
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTD-IHPVSGGRPVCPLCKKPFTKENIRP 67
Query: 368 IY 373
++
Sbjct: 68 VW 69
>sp|A7XUJ6|TRAF6_PIG TNF receptor-associated factor 6 OS=Sus scrofa
GN=TRAF6 PE=2 SV=1
Length = 541
Score = 47.0 bits (110), Expect = 1e-04
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Frame = +2
Query: 122 AGEADQSSSKKRRTGQQLSS--------DVQSDESKEVKLTCAICISTMEEETSTICGHI 277
A D S TG SS DV+ D E K C IC+ + E T CGH
Sbjct: 30 AAAKDDGVSGTASTGNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHR 89
Query: 278 FCKKCITNAIH-RWKRCPTCRKKLAINNI 361
FCK CI +I +CP + L N +
Sbjct: 90 FCKACIIKSIRDAGHKCPVDNEILLENQL 118
>sp|B6CJY5|TRAF6_MACMU TNF receptor-associated factor 6 OS=Macaca
mulatta GN=TRAF6 PE=2 SV=1
Length = 522
Score = 47.0 bits (110), Expect = 1e-04
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Frame = +2
Query: 122 AGEADQSSSKKRRTGQQLSS--------DVQSDESKEVKLTCAICISTMEEETSTICGHI 277
A D S TG SS DV+ D E K C IC+ + E T CGH
Sbjct: 29 AATKDDSVGGTASTGNLSSSFMEDIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHR 88
Query: 278 FCKKCITNAIH-RWKRCPTCRKKLAINNI 361
FCK CI +I +CP + L N +
Sbjct: 89 FCKACIIKSIRDAGHKCPVDNEILLENQL 117
>sp|B6CJY4|TRAF6_CERTO TNF receptor-associated factor 6
OS=Cercocebus torquatus atys GN=TRAF6 PE=2 SV=1
Length = 522
Score = 47.0 bits (110), Expect = 1e-04
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Frame = +2
Query: 122 AGEADQSSSKKRRTGQQLSS--------DVQSDESKEVKLTCAICISTMEEETSTICGHI 277
A D S TG SS DV+ D E K C IC+ + E T CGH
Sbjct: 29 AATKDDSVGGTASTGNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHR 88
Query: 278 FCKKCITNAIH-RWKRCPTCRKKLAINNI 361
FCK CI +I +CP + L N +
Sbjct: 89 FCKACIIKSIRDAGHKCPVDNEILLENQL 117
>sp|O60683|PEX10_HUMAN Peroxisome biogenesis factor 10 OS=Homo
sapiens GN=PEX10 PE=1 SV=1
Length = 326
Score = 47.0 bits (110), Expect = 1e-04
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 137 QSSSKKRRTGQQLSSDVQSDESKEVKLT--CAICISTMEEETSTICGHIFCKKCITNAIH 310
Q + K+ R + LS S E + V C +C+ T+T CGH+FC +CIT
Sbjct: 243 QRARKEWRLHRGLSHRRASLEERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCS 302
Query: 311 RWKRCPTCRKK 343
CP CR+K
Sbjct: 303 SKAECPLCREK 313
>sp|Q7S304|BRE1_NEUCR E3 ubiquitin-protein ligase bre-1
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=bre-1 PE=3 SV=1
Length = 707
Score = 47.0 bits (110), Expect = 1e-04
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 140 SSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAI-HRW 316
SS + + + S+ + +E + C++C S + CGH+FC +C+ N + +R
Sbjct: 628 SSERDKWKTKCQSNSTEEEEMLRNLVLCSVCRSNFKNTILKGCGHVFCNECVDNRLANRM 687
Query: 317 KRCPTCRK 340
++CP+C K
Sbjct: 688 RKCPSCNK 695
>sp|Q9Y4K3|TRAF6_HUMAN TNF receptor-associated factor 6 OS=Homo
sapiens GN=TRAF6 PE=1 SV=1
Length = 522
Score = 46.6 bits (109), Expect = 1e-04
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 182 DVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIH-RWKRCPTCRKKLAINN 358
DV+ D E K C IC+ + E T CGH FCK CI +I +CP + L N
Sbjct: 57 DVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQ 116
Query: 359 I 361
+
Sbjct: 117 L 117
>sp|Q3ZCC3|TRAF6_BOVIN TNF receptor-associated factor 6 OS=Bos
taurus GN=TRAF6 PE=2 SV=1
Length = 542
Score = 46.6 bits (109), Expect = 1e-04
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 182 DVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIH-RWKRCPTCRKKLAINN 358
DV+ D E K C IC+ + E T CGH FCK CI +I +CP + L N
Sbjct: 58 DVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQ 117
Query: 359 I 361
+
Sbjct: 118 L 118
>sp|Q6PC78|RN185_DANRE RING finger protein 185 OS=Danio rerio
GN=rnf185 PE=2 SV=1
Length = 194
Score = 46.6 bits (109), Expect = 1e-04
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Frame = +2
Query: 131 ADQSSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIH 310
+ SSS Q + + +++ C IC+ T ++ ++CGH+FC C +H
Sbjct: 11 SSSSSSSAGAANGQSAGESGGGGAQDSTFECNICLDTSKDAVISLCGHLFCWPC----LH 66
Query: 311 RW-------KRCPTCRKKLAINNIHRIYISSSTG 391
+W + CP C+ ++ + + +Y STG
Sbjct: 67 QWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTG 100
>sp|Q9D9R0|RN125_MOUSE E3 ubiquitin-protein ligase RNF125 OS=Mus
musculus GN=Rnf125 PE=2 SV=3
Length = 233
Score = 46.6 bits (109), Expect = 1e-04
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +2
Query: 125 GEADQSSSKKRRTGQQLSSDVQSDESKEVKLT---CAICISTMEEETSTICGHIFCKKCI 295
G S S K ++ E+ +T C++C+ + + T CGH+FC+ CI
Sbjct: 2 GSLLSSDSSKSAPASATPRTLERSGDSELPITSFDCSVCLEVLHQPVRTRCGHVFCRSCI 61
Query: 296 TNAI---HRWKRCPTCRKKL 346
+I ++W CP CR L
Sbjct: 62 ATSIKNNNKW-TCPYCRAYL 80
>sp|Q8HXW8|PEX10_MACFA Peroxisome biogenesis factor 10 OS=Macaca
fascicularis GN=PEX10 PE=2 SV=1
Length = 326
Score = 46.6 bits (109), Expect = 1e-04
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 137 QSSSKKRRTGQQLSSDVQSDESKEVKLT--CAICISTMEEETSTICGHIFCKKCITNAIH 310
Q + K+ R + LS S E + V C +C+ T+T CGH+FC +CIT
Sbjct: 243 QRARKEWRLHRGLSHRRGSLEERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCS 302
Query: 311 RWKRCPTCRKK 343
CP CR+K
Sbjct: 303 SKAECPLCREK 313
>sp|Q6PCN7|HLTF_MOUSE Helicase-like transcription factor OS=Mus
musculus GN=Hltf PE=1 SV=1
Length = 1003
Score = 46.6 bits (109), Expect = 1e-04
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +2
Query: 221 CAICISTMEEETSTICGHIFCKKCITNAIHRWK---RCPTCRKKLAINNI 361
CAIC+ ++ T C H+FCK CI IH + +CP CR ++ +N+
Sbjct: 754 CAICLDSLTFPVITHCAHVFCKPCICQVIHSEQPHAKCPLCRNEIHGDNL 803
>sp|Q9P6R8|CWC24_SCHPO Pre-mRNA-splicing factor cwc24
OS=Schizosaccharomyces pombe (strain ATCC 38366 / 972)
GN=cwf24 PE=1 SV=1
Length = 533
Score = 46.6 bits (109), Expect = 1e-04
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 140 SSSKKRRTGQQLSSDVQSDESKE-VKLTCAICISTMEEETSTICGHIFCKKCITNAIHRW 316
S +K + G +L + +E KE + C IC +T CGH FC++C AI R+
Sbjct: 226 SVQEKYKKGAKLEEGMVKNEKKEDIPFVCLICKKDYRSPIATTCGHHFCEQC---AITRY 282
Query: 317 KRCPTC 334
++ PTC
Sbjct: 283 RKTPTC 288
>sp|Q4I7N9|BRE1_GIBZE E3 ubiquitin-protein ligase BRE1 OS=Gibberella
zeae (strain PH-1 / FGSC 9075 / NRRL 31084) GN=BRE1 PE=3
SV=1
Length = 703
Score = 46.6 bits (109), Expect = 1e-04
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +2
Query: 173 LSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAI-HRWKRCPTCRK--- 340
LS+ + +E C IC + + CGH+FC +C+ + I +R ++CPTC +
Sbjct: 635 LSNSSEEEEMLRTFALCTICRNNFKNTALKTCGHLFCNQCVDDRISNRMRKCPTCSRAFD 694
Query: 341 KLAINNIH 364
K+ + +H
Sbjct: 695 KMDVMPVH 702
>sp|O60106|YOXA_SCHPO LON peptidase N-terminal domain and RING
finger protein C14F5.10c OS=Schizosaccharomyces pombe
(strain ATCC 38366 / 972) GN=SPBC14F5.10c PE=2 SV=1
Length = 486
Score = 46.2 bits (108), Expect = 2e-04
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 140 SSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWK 319
SSS + + L + E+ +L C IC + + + CGH FC C+ A+ +
Sbjct: 142 SSSYETAVAEFLHMEDLLQENVSRELECQICFGMLYDPVVSPCGHTFCGPCLMQALTQSP 201
Query: 320 RCPTCR 337
+CPTCR
Sbjct: 202 QCPTCR 207
>sp|Q6NTV1|RNFT1_XENLA RING finger and transmembrane
domain-containing protein 1 OS=Xenopus laevis GN=rnft1
PE=2 SV=2
Length = 416
Score = 46.2 bits (108), Expect = 2e-04
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +2
Query: 221 CAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKLAINNIHR 367
CAIC + + + IC H+FC++CI++ ++ K CP CR L N+ H+
Sbjct: 356 CAICQAEFTKPIALICQHVFCEECISSWFNKEKTCPLCR-TLISNHSHK 403
>sp|Q5RFK9|RN185_PONAB RING finger protein 185 OS=Pongo abelii
GN=RNF185 PE=2 SV=1
Length = 192
Score = 46.2 bits (108), Expect = 2e-04
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Frame = +2
Query: 125 GEADQSSSKKRRTGQQLSSDVQSDES--KEVKLTCAICISTMEEETSTICGHIFCKKCIT 298
G + SS + G S + ES ++ C IC+ T ++ ++CGH+FC C
Sbjct: 5 GPSASSSPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPC-- 62
Query: 299 NAIHRW-------KRCPTCRKKLAINNIHRIYISSSTG 391
+H+W + CP C+ ++ + + +Y STG
Sbjct: 63 --LHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTG 98
>sp|Q91YT2|RN185_MOUSE RING finger protein 185 OS=Mus musculus
GN=Rnf185 PE=2 SV=1
Length = 192
Score = 46.2 bits (108), Expect = 2e-04
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Frame = +2
Query: 125 GEADQSSSKKRRTGQQLSSDVQSDES--KEVKLTCAICISTMEEETSTICGHIFCKKCIT 298
G + +S++ G S + ES ++ C IC+ T ++ ++CGH+FC C
Sbjct: 5 GPSASASTENSNAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPC-- 62
Query: 299 NAIHRW-------KRCPTCRKKLAINNIHRIYISSSTG 391
+H+W + CP C+ ++ + + +Y STG
Sbjct: 63 --LHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTG 98
>sp|Q4KLY4|RING2_RAT E3 ubiquitin-protein ligase RING2 OS=Rattus
norvegicus GN=Rnf2 PE=2 SV=1
Length = 308
Score = 46.2 bits (108), Expect = 2e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +2
Query: 155 RRTGQQLSSD----VQSDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW- 316
+RT Q+ +D V S S +L C IC+ ++ +T C H FC CI A+
Sbjct: 25 QRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGN 84
Query: 317 KRCPTCRKKL 346
K CPTCRKKL
Sbjct: 85 KECPTCRKKL 94
>sp|Q5R9J5|RING2_PONAB E3 ubiquitin-protein ligase RING2 OS=Pongo
abelii GN=RNF2 PE=2 SV=1
Length = 336
Score = 46.2 bits (108), Expect = 2e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +2
Query: 155 RRTGQQLSSD----VQSDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW- 316
+RT Q+ +D V S S +L C IC+ ++ +T C H FC CI A+
Sbjct: 25 QRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGN 84
Query: 317 KRCPTCRKKL 346
K CPTCRKKL
Sbjct: 85 KECPTCRKKL 94
>sp|Q9CQJ4|RING2_MOUSE E3 ubiquitin-protein ligase RING2 OS=Mus
musculus GN=Rnf2 PE=1 SV=1
Length = 336
Score = 46.2 bits (108), Expect = 2e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +2
Query: 155 RRTGQQLSSD----VQSDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW- 316
+RT Q+ +D V S S +L C IC+ ++ +T C H FC CI A+
Sbjct: 25 QRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGN 84
Query: 317 KRCPTCRKKL 346
K CPTCRKKL
Sbjct: 85 KECPTCRKKL 94
>sp|Q99496|RING2_HUMAN E3 ubiquitin-protein ligase RING2 OS=Homo
sapiens GN=RNF2 PE=1 SV=1
Length = 336
Score = 46.2 bits (108), Expect = 2e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +2
Query: 155 RRTGQQLSSD----VQSDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW- 316
+RT Q+ +D V S S +L C IC+ ++ +T C H FC CI A+
Sbjct: 25 QRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGN 84
Query: 317 KRCPTCRKKL 346
K CPTCRKKL
Sbjct: 85 KECPTCRKKL 94
>sp|Q6ZMN7|PZRN4_HUMAN PDZ domain-containing RING finger protein 4
OS=Homo sapiens GN=PDZRN4 PE=1 SV=3
Length = 1036
Score = 46.2 bits (108), Expect = 2e-04
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +2
Query: 197 ESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKLAINNIHRI 370
E+ + L C +C +EE T CGH+FC C+ R +RCP + LA ++R+
Sbjct: 10 EAVDPALECKLCGQVLEEPLCTPCGHVFCASCLLPWAVRRRRCPLQCQPLAPGELYRV 67
>sp|Q6CF78|BRE1_YARLI E3 ubiquitin-protein ligase BRE1 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=BRE1 PE=3 SV=1
Length = 700
Score = 46.2 bits (108), Expect = 2e-04
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 191 SDESKEVK--LTCAICISTMEEETSTICGHIFCKKCITNAIH-RWKRCPTCRKKLAINNI 361
SDE E++ C++C ++ +CGH+FC +C + + R ++CP C K + N++
Sbjct: 636 SDEIDELRSIAMCSLCSKNWKDTALKVCGHVFCHQCAQDRLDARLRKCPNCNKPFSQNDL 695
Query: 362 HRIYI 376
+++
Sbjct: 696 LTVHL 700
>sp|Q8RXD6|BRE1A_ARATH E3 ubiquitin-protein ligase BRE1-like 1
OS=Arabidopsis thaliana GN=HUB1 PE=1 SV=1
Length = 878
Score = 46.2 bits (108), Expect = 2e-04
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 137 QSSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAI-HR 313
+ SS ++ Q+LS E KE+ L C C +E T C H+FC C+ R
Sbjct: 805 EGSSAIQKLRQELS------EFKEI-LKCKACNDRPKEVVITKCYHLFCNPCVQKLTGTR 857
Query: 314 WKRCPTCRKKLAINNIHRIYI 376
K+CPTC N+I IYI
Sbjct: 858 QKKCPTCSASFGPNDIKPIYI 878
>sp|Q02084|A33_PLEWA Zinc-binding protein A33 OS=Pleurodeles waltl
PE=1 SV=2
Length = 625
Score = 46.2 bits (108), Expect = 2e-04
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Frame = +2
Query: 125 GEADQSSSKKRRTGQQLSSDVQSDESKEV----------KLTCAICISTMEEETSTICGH 274
G +DQS K R+ ++ D D+ K LTC +C S +E CGH
Sbjct: 121 GVSDQSEGKAARSNKRKIEDGDGDQKKRKVDDEEDDFTEDLTCPLCRSLFKEPVILECGH 180
Query: 275 IFCKKCITNAIHRWK-----RCPTCRKKL 346
FCK CI + W+ CP C++ L
Sbjct: 181 NFCKHCIDKS---WESASAFSCPECKEVL 206
>sp|Q5D7I5|TRIM5_CEBPY Tripartite motif-containing protein 5
OS=Cebuella pygmaea GN=TRIM5 PE=3 SV=1
Length = 494
Score = 45.8 bits (107), Expect = 2e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +2
Query: 212 KLTCAICISTMEEETSTICGHIFCKKCIT-----NAIHRWKR-CPTCRKKLAINNI 361
++TC IC+ + E S CGH FC+ CIT + +H+ +R CP CR N+
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRMSYPSENL 67
>sp|Q5D7I1|TRIM5_ATEGE Tripartite motif-containing protein 5
OS=Ateles geoffroyi GN=TRIM5 PE=2 SV=1
Length = 547
Score = 45.8 bits (107), Expect = 2e-04
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Frame = +2
Query: 173 LSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCIT-----NAIHRWKR-CPTC 334
++S++ + +EV TC IC+ + E S CGH FC+ CIT + +H+ +R CP C
Sbjct: 1 MASEILLNIKEEV--TCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLC 58
Query: 335 RKKLAINNI 361
R N+
Sbjct: 59 RVSYQSENL 67
>sp|Q1XHT8|TRI40_PANTR Tripartite motif-containing protein 40 OS=Pan
troglodytes GN=TRIM40 PE=3 SV=1
Length = 229
Score = 45.8 bits (107), Expect = 2e-04
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +2
Query: 185 VQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKR-----CPTCRK 340
+Q D +E C IC +++E ST CGH+FC+ C+T + + CP CRK
Sbjct: 4 LQKDNQEEG--VCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRK 58
>sp|Q6P9F5|TRI40_HUMAN Tripartite motif-containing protein 40
OS=Homo sapiens GN=TRIM40 PE=2 SV=3
Length = 258
Score = 45.8 bits (107), Expect = 2e-04
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +2
Query: 185 VQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKR-----CPTCRK 340
+Q D +E C IC +++E ST CGH+FC+ C+T + + CP CRK
Sbjct: 4 LQKDNQEEG--VCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRK 58
>sp|Q7YRV4|RO52_BOVIN E3 ubiquitin-protein ligase TRIM21 OS=Bos
taurus GN=TRIM21 PE=2 SV=1
Length = 469
Score = 45.8 bits (107), Expect = 2e-04
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 KLTCAICISTMEEETSTICGHIFCKKCITN-AIHRWKRCPTCRKKLAINNI 361
++TC+IC+ M E S CGH FC++CI+ CP CR+ + N+
Sbjct: 13 EVTCSICLDPMVEPMSIECGHSFCQECISEVGKEGGSVCPVCRRHFLLQNL 63
>sp|Q568Y3|RN185_RAT RING finger protein 185 OS=Rattus norvegicus
GN=Rnf185 PE=2 SV=1
Length = 192
Score = 45.8 bits (107), Expect = 2e-04
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Frame = +2
Query: 125 GEADQSSSKKRRTGQQLSSDVQSDES--KEVKLTCAICISTMEEETSTICGHIFCKKCIT 298
G + +S++ G S + ES ++ C IC+ T ++ ++CGH+FC C
Sbjct: 5 GPSASASTENSSAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPC-- 62
Query: 299 NAIHRW-------KRCPTCRKKLAINNIHRIYISSSTG 391
+H+W + CP C+ ++ + + +Y STG
Sbjct: 63 --LHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTG 98
>sp|Q6PJ69|TRI65_HUMAN Tripartite motif-containing protein 65
OS=Homo sapiens GN=TRIM65 PE=1 SV=3
Length = 517
Score = 45.4 bits (106), Expect = 3e-04
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 206 EVKLTCAICISTMEEETSTICGHIFCKKCITNAIHR-WKRCPTCRK 340
E KLTCAIC+ ++ + CGH FC CI + R K CP CR+
Sbjct: 7 EEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKACPECRE 52
>sp|Q9VRP9|BRE1_DROME E3 ubiquitin-protein ligase Bre1 OS=Drosophila
melanogaster GN=Bre1 PE=1 SV=2
Length = 1044
Score = 45.4 bits (106), Expect = 3e-04
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 149 KKRRTGQQLSSDVQSDESKEVK--LTCAICISTMEEETSTICGHIFCKKCI-TNAIHRWK 319
KK +V +E +E K LTC C ++ + C H+FC C+ T R +
Sbjct: 965 KKMEMSGTTIDEVMIEEIREYKETLTCPSCKVKRKDAVLSKCFHVFCYDCLRTRYETRQR 1024
Query: 320 RCPTCRKKLAINNIHRIYI 376
+CP C N+ HR+Y+
Sbjct: 1025 KCPKCNCAFGANDYHRLYL 1043
>sp|Q5D7H7|TRIM5_LAGLA Tripartite motif-containing protein 5
OS=Lagothrix lagotricha GN=TRIM5 PE=3 SV=1
Length = 547
Score = 45.1 bits (105), Expect = 4e-04
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Frame = +2
Query: 173 LSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCIT-----NAIHRWKR-CPTC 334
++S++ + +EV TC IC+ + E S CGH FC+ CIT + +H+ +R CP C
Sbjct: 1 MASEILVNIKEEV--TCPICLDLLTEPLSLDCGHSFCQACITADHKESTLHQGERSCPLC 58
Query: 335 R 337
R
Sbjct: 59 R 59
>sp|Q5D7H8|TRIM5_CALDO Tripartite motif-containing protein 5
OS=Callicebus donacophilus GN=TRIM5 PE=3 SV=1
Length = 494
Score = 45.1 bits (105), Expect = 4e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +2
Query: 212 KLTCAICISTMEEETSTICGHIFCKKCIT-----NAIHRWKR-CPTCRKKLAINNI 361
++TC IC+ + E S CGH FC+ CIT + +H+ +R CP CR N+
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRISYPSENL 67
>sp|Q7YR34|TRI26_PANTR Tripartite motif-containing protein 26 OS=Pan
troglodytes GN=TRIM26 PE=3 SV=1
Length = 539
Score = 45.1 bits (105), Expect = 4e-04
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 200 SKEVKLTCAICISTMEEETSTICGHIFCKKCITNA---IHRWKRCPTCRKKLAINNIHRI 370
S E ++TC+IC+ + + + CGH+FC+ C T+ CP C+K NI +
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPV 68
Query: 371 Y 373
+
Sbjct: 69 W 69
>sp|Q12899|TRI26_HUMAN Tripartite motif-containing protein 26
OS=Homo sapiens GN=TRIM26 PE=2 SV=1
Length = 539
Score = 45.1 bits (105), Expect = 4e-04
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 200 SKEVKLTCAICISTMEEETSTICGHIFCKKCITNA---IHRWKRCPTCRKKLAINNIHRI 370
S E ++TC+IC+ + + + CGH+FC+ C T+ CP C+K NI +
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPV 68
Query: 371 Y 373
+
Sbjct: 69 W 69
>sp|Q3MV19|TRF6A_XENLA TNF receptor-associated factor 6-A OS=Xenopus
laevis GN=traf6-a PE=1 SV=1
Length = 556
Score = 45.1 bits (105), Expect = 4e-04
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 182 DVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAI-HRWKRCP 328
DV+ D E K C IC+ + E T CGH FCK CI ++ + +CP
Sbjct: 59 DVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACILKSLRNAGHKCP 108
>sp|Q96GF1|RN185_HUMAN RING finger protein 185 OS=Homo sapiens
GN=RNF185 PE=2 SV=1
Length = 192
Score = 45.1 bits (105), Expect = 4e-04
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Frame = +2
Query: 125 GEADQSSSKKRRTGQQLSSDVQSDES--KEVKLTCAICISTMEEETSTICGHIFCKKCIT 298
G + +S + G S + ES ++ C IC+ T ++ ++CGH+FC C
Sbjct: 5 GPSASASPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPC-- 62
Query: 299 NAIHRW-------KRCPTCRKKLAINNIHRIYISSSTG 391
+H+W + CP C+ ++ + + +Y STG
Sbjct: 63 --LHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTG 98
>sp|Q75EN0|RAD18_ASHGO Postreplication repair E3 ubiquitin-protein
ligase RAD18 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=RAD18 PE=3 SV=1
Length = 443
Score = 45.1 bits (105), Expect = 4e-04
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 215 LTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKLAINNIHRIYI 376
L C IC ++ T CGH FC CI +++ RCP C +L N + + ++
Sbjct: 30 LRCHICKDMLQTPVLTQCGHTFCSLCIREYLNKESRCPLCLAELRQNMLQKEFL 83
>sp|P34537|BRE1_CAEEL E3 ubiquitin-protein ligase bre-1
OS=Caenorhabditis elegans GN=rfp-1 PE=1 SV=2
Length = 837
Score = 45.1 bits (105), Expect = 4e-04
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 170 QLSSDVQSDESKEVK--LTCAICISTMEEETSTICGHIFCKKCITNAIH-RWKRCPTCRK 340
Q V + ++++K LTC C + ++ C H+FC+ CI R ++CP C
Sbjct: 766 QSGDQVLEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKCNS 825
Query: 341 KLAINNIHRIYI 376
N+ HRI+I
Sbjct: 826 NFGANDFHRIFI 837
>sp|Q95153|BRCA1_CANFA Breast cancer type 1 susceptibility protein
homolog OS=Canis familiaris GN=BRCA1 PE=3 SV=1
Length = 1878
Score = 45.1 bits (105), Expect = 4e-04
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 12/67 (17%)
Frame = +2
Query: 182 DVQSDESKEVK---------LTCAICISTMEEETSTICGHIFCKKCITNAIHRWK---RC 325
D+ +D +EV+ L C IC+ ++E ST C HIFCK C+ +++ K +C
Sbjct: 2 DLSADRVEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQC 61
Query: 326 PTCRKKL 346
P C+ +
Sbjct: 62 PLCKNDI 68
>sp|Q864U1|BRCA1_BOVIN Breast cancer type 1 susceptibility protein
homolog OS=Bos taurus GN=BRCA1 PE=1 SV=1
Length = 1849
Score = 45.1 bits (105), Expect = 4e-04
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 12/67 (17%)
Frame = +2
Query: 182 DVQSDESKEVK---------LTCAICISTMEEETSTICGHIFCKKCITNAIHRWK---RC 325
D+ +D +EV+ L C IC+ ++E ST C HIFCK C+ +++ K +C
Sbjct: 2 DLSADHVEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQC 61
Query: 326 PTCRKKL 346
P C+ +
Sbjct: 62 PLCKNDI 68
>sp|Q5D7I0|TRIM5_SAISC Tripartite motif-containing protein 5
OS=Saimiri sciureus GN=TRIM5 PE=3 SV=1
Length = 494
Score = 44.7 bits (104), Expect = 5e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +2
Query: 212 KLTCAICISTMEEETSTICGHIFCKKCIT-----NAIHRWKR-CPTCRKKLAINNI 361
++TC IC+ + E S CGH FC+ CIT + +H+ +R CP CR N+
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESMLHQGERSCPLCRLPYQSENL 67
>sp|Q5BN31|TRIM5_SAIBB Tripartite motif-containing protein 5
OS=Saimiri boliviensis boliviensis GN=TRIM5 PE=2 SV=1
Length = 494
Score = 44.7 bits (104), Expect = 5e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +2
Query: 212 KLTCAICISTMEEETSTICGHIFCKKCIT-----NAIHRWKR-CPTCRKKLAINNI 361
++TC IC+ + E S CGH FC+ CIT + +H+ +R CP CR N+
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESMLHQGERSCPLCRLPYQSENL 67
>sp|Q5D7I2|TRIM5_PITPI Tripartite motif-containing protein 5
OS=Pithecia pithecia GN=TRIM5 PE=3 SV=1
Length = 494
Score = 44.7 bits (104), Expect = 5e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +2
Query: 212 KLTCAICISTMEEETSTICGHIFCKKCIT-----NAIHRWKR-CPTCRKKLAINNI 361
++TC IC+ + E S CGH FC+ CIT + +H+ +R CP CR N+
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKKSMLHQGERSCPLCRISYPSENL 67
>sp|Q5D7I6|TRIM5_ALOSA Tripartite motif-containing protein 5
OS=Alouatta sara GN=TRIM5 PE=3 SV=1
Length = 551
Score = 44.7 bits (104), Expect = 5e-04
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 212 KLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKR---CPTCRKKLAINNI 361
++TC IC+ + E S CGH FC+ CIT A H+ R CP CR N+
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACIT-ANHKESRERSCPLCRVSYHSENL 63
>sp|Q5M7Z0|RNFT1_HUMAN RING finger and transmembrane
domain-containing protein 1 OS=Homo sapiens GN=RNFT1
PE=2 SV=2
Length = 435
Score = 44.7 bits (104), Expect = 5e-04
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 197 ESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCR 337
+ +V C+IC + ++ IC HIFC++C+T +R K CP CR
Sbjct: 367 QCSDVDDICSICQAEFQKPILLICQHIFCEECMTLWFNREKTCPLCR 413
>sp|Q803I4|RING2_DANRE E3 ubiquitin-protein ligase RING2 OS=Danio
rerio GN=rnf2 PE=2 SV=1
Length = 336
Score = 44.7 bits (104), Expect = 5e-04
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +2
Query: 155 RRTGQQLSSD----VQSDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW- 316
+RT Q+ +D S S +L C IC+ ++ +T C H FC CI A+
Sbjct: 25 QRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGN 84
Query: 317 KRCPTCRKKL 346
K CPTCRKKL
Sbjct: 85 KECPTCRKKL 94
>sp|Q9VB08|RING1_DROME E3 ubiquitin-protein ligase RING1
OS=Drosophila melanogaster GN=Sce PE=1 SV=1
Length = 435
Score = 44.7 bits (104), Expect = 5e-04
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 191 SDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW-KRCPTCRKKL 346
S S +L C IC+ +++ +T C H FC CI A+ K CPTCRKKL
Sbjct: 36 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 89
>sp|Q91XL2|LNX2_MOUSE Ligand of Numb protein X 2 OS=Mus musculus
GN=Lnx2 PE=1 SV=1
Length = 687
Score = 44.7 bits (104), Expect = 5e-04
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 215 LTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKL 346
L C IC+ + + T CGH FC KC+ N + CP RK+L
Sbjct: 49 LVCHICLQPLLQPLDTPCGHTFCHKCLRNFLQEKDFCPLDRKRL 92
>sp|O54952|BRCA1_RAT Breast cancer type 1 susceptibility protein
homolog OS=Rattus norvegicus GN=Brca1 PE=1 SV=1
Length = 1817
Score = 44.7 bits (104), Expect = 5e-04
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 215 LTCAICISTMEEETSTICGHIFCKKCITNAIHRWK---RCPTCRKKL 346
L C IC+ ++E ST C HIFCK C+ +++ K +CP C+ ++
Sbjct: 22 LECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEI 68
>sp|P48754|BRCA1_MOUSE Breast cancer type 1 susceptibility protein
homolog OS=Mus musculus GN=Brca1 PE=1 SV=2
Length = 1812
Score = 44.7 bits (104), Expect = 5e-04
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 215 LTCAICISTMEEETSTICGHIFCKKCITNAIHRWK---RCPTCRKKL 346
L C IC+ ++E ST C HIFCK C+ +++ K +CP C+ ++
Sbjct: 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEI 68
>sp|Q9SRX9|BAH1_ARATH E3 ubiquitin-protein ligase BAH1
OS=Arabidopsis thaliana GN=BAH1 PE=1 SV=1
Length = 335
Score = 44.7 bits (104), Expect = 5e-04
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Frame = +2
Query: 173 LSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNA-----------IHRWK 319
LS ++ ++ LTC+IC+ T+ + S CGHI+C C +A +
Sbjct: 215 LSCELSDSVKVDIDLTCSICLDTVFDPISLTCGHIYCYMCACSAASVNVVDGLKTAEATE 274
Query: 320 RCPTCRK 340
+CP CR+
Sbjct: 275 KCPLCRE 281
>sp|Q7ZWM8|RNG2B_XENLA E3 ubiquitin-protein ligase RING2-B
OS=Xenopus laevis GN=rnf2-b PE=2 SV=2
Length = 343
Score = 44.3 bits (103), Expect = 7e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 191 SDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW-KRCPTCRKKL 346
S S +L C IC+ ++ +T C H FC CI A+ K CPTCRKKL
Sbjct: 37 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 90
>sp|Q66J69|RNG2A_XENLA E3 ubiquitin-protein ligase RING2-A
OS=Xenopus laevis GN=rnf2-a PE=2 SV=1
Length = 344
Score = 44.3 bits (103), Expect = 7e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 191 SDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW-KRCPTCRKKL 346
S S +L C IC+ ++ +T C H FC CI A+ K CPTCRKKL
Sbjct: 38 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>sp|Q6J2U6|RN114_RAT RING finger protein 114 OS=Rattus norvegicus
GN=Rnf114 PE=2 SV=1
Length = 229
Score = 44.3 bits (103), Expect = 7e-04
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 140 SSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWK 319
++ + R G S+ S+ + TC +C+ E+ CGH+FC C+ + K
Sbjct: 3 AAQPESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPKK 62
Query: 320 R-CPTCRKKLA 349
C CR LA
Sbjct: 63 PVCGVCRSALA 73
>sp|Q9ET26|RN114_MOUSE RING finger protein 114 OS=Mus musculus
GN=Rnf114 PE=2 SV=2
Length = 229
Score = 44.3 bits (103), Expect = 7e-04
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 140 SSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWK 319
++ + R G S+ S+ + TC +C+ E+ CGH+FC C+ + K
Sbjct: 3 AAQPESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPKK 62
Query: 320 R-CPTCRKKLA 349
C CR LA
Sbjct: 63 PVCGVCRSALA 73
>sp|Q8GUK7|RMA3_ARATH E3 ubiquitin-protein ligase RMA3
OS=Arabidopsis thaliana GN=RMA3 PE=1 SV=1
Length = 243
Score = 44.3 bits (103), Expect = 7e-04
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
Frame = +2
Query: 221 CAICISTMEEETSTICGHIFCKKCITNAIH----------RWKRCPTCRKKLAINNIHRI 370
C IC+ T + T+CGH+FC CI +H CP C+ + I ++ +
Sbjct: 44 CNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNITITSLVPL 103
Query: 371 Y 373
Y
Sbjct: 104 Y 104
>sp|Q6MGB6|RING1_RAT E3 ubiquitin-protein ligase RING1 OS=Rattus
norvegicus GN=Ring1 PE=2 SV=2
Length = 406
Score = 44.3 bits (103), Expect = 7e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 191 SDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW-KRCPTCRKKL 346
S S +L C IC+ ++ +T C H FC CI A+ K CPTCRKKL
Sbjct: 38 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>sp|A2T6X5|RING1_PANTR E3 ubiquitin-protein ligase RING1 OS=Pan
troglodytes GN=RING1 PE=3 SV=1
Length = 377
Score = 44.3 bits (103), Expect = 7e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 191 SDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW-KRCPTCRKKL 346
S S +L C IC+ ++ +T C H FC CI A+ K CPTCRKKL
Sbjct: 9 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 62
>sp|A1YFY1|RING1_PANPA E3 ubiquitin-protein ligase RING1 OS=Pan
paniscus GN=RING1 PE=3 SV=1
Length = 377
Score = 44.3 bits (103), Expect = 7e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 191 SDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW-KRCPTCRKKL 346
S S +L C IC+ ++ +T C H FC CI A+ K CPTCRKKL
Sbjct: 9 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 62
>sp|O35730|RING1_MOUSE E3 ubiquitin-protein ligase RING1 OS=Mus
musculus GN=Ring1 PE=1 SV=2
Length = 406
Score = 44.3 bits (103), Expect = 7e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 191 SDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW-KRCPTCRKKL 346
S S +L C IC+ ++ +T C H FC CI A+ K CPTCRKKL
Sbjct: 38 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>sp|Q8WMN5|RING1_MACMU E3 ubiquitin-protein ligase RING1 OS=Macaca
mulatta GN=RING1 PE=3 SV=1
Length = 377
Score = 44.3 bits (103), Expect = 7e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 191 SDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW-KRCPTCRKKL 346
S S +L C IC+ ++ +T C H FC CI A+ K CPTCRKKL
Sbjct: 9 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 62
>sp|Q06587|RING1_HUMAN E3 ubiquitin-protein ligase RING1 OS=Homo
sapiens GN=RING1 PE=1 SV=2
Length = 406
Score = 44.3 bits (103), Expect = 7e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 191 SDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW-KRCPTCRKKL 346
S S +L C IC+ ++ +T C H FC CI A+ K CPTCRKKL
Sbjct: 38 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>sp|A1YER5|RING1_GORGO E3 ubiquitin-protein ligase RING1 OS=Gorilla
gorilla gorilla GN=RING1 PE=3 SV=1
Length = 377
Score = 44.3 bits (103), Expect = 7e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 191 SDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW-KRCPTCRKKL 346
S S +L C IC+ ++ +T C H FC CI A+ K CPTCRKKL
Sbjct: 9 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 62
>sp|Q5TJF3|RING1_CANFA E3 ubiquitin-protein ligase RING1 OS=Canis
familiaris GN=RING1 PE=3 SV=2
Length = 406
Score = 44.3 bits (103), Expect = 7e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 191 SDESKEVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIHRW-KRCPTCRKKL 346
S S +L C IC+ ++ +T C H FC CI A+ K CPTCRKKL
Sbjct: 38 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKL 91
>sp|P68907|PZRN3_RAT E3 ubiquitin-protein ligase PDZRN3 OS=Rattus
norvegicus GN=Pdzrn3 PE=1 SV=1
Length = 1062
Score = 44.3 bits (103), Expect = 7e-04
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 194 DESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPT-CRKKLAINNIHRI 370
D + L CA+C +E+ +T CGH+FC C+ + + CP+ CR +L+ ++ +
Sbjct: 9 DGEVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPSRCRGRLSAKELNHV 68
>sp|Q9D4H7|LONF3_MOUSE LON peptidase N-terminal domain and RING
finger protein 3 OS=Mus musculus GN=Lonrf3 PE=2 SV=1
Length = 753
Score = 44.3 bits (103), Expect = 7e-04
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 215 LTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKL 346
L C++C+ E +T CGH FC KC+ + +CP C+ L
Sbjct: 459 LECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDVL 502
>sp|Q8N448|LNX2_HUMAN Ligand of Numb protein X 2 OS=Homo sapiens
GN=LNX2 PE=1 SV=1
Length = 690
Score = 44.3 bits (103), Expect = 7e-04
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 215 LTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKL 346
L C IC+ + + T CGH FC KC+ N + CP RK+L
Sbjct: 48 LVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDRKRL 91
>sp|Q6FWF3|BRE1_CANGA E3 ubiquitin-protein ligase BRE1 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=BRE1 PE=3 SV=1
Length = 693
Score = 44.3 bits (103), Expect = 7e-04
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +2
Query: 173 LSSDVQSDESKEVK--LTCAICISTMEEETSTICGHIFCKKCITNAI-HRWKRCPTCRKK 343
L D ++E + + + C++C + CGH+FC+ C + R ++CPTC K
Sbjct: 623 LDEDSMAEELENFRTLVYCSLCSKNWKNMAIRTCGHVFCEDCCKERLAARMRKCPTCNKP 682
Query: 344 LAINNIHRIYI 376
+ N++ +++
Sbjct: 683 FSSNDLLMVHL 693
>sp|Q336R3|BRE1B_ORYSJ E3 ubiquitin-protein ligase BRE1-like 2
OS=Oryza sativa subsp. japonica GN=BRE1B PE=2 SV=1
Length = 844
Score = 44.3 bits (103), Expect = 7e-04
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +2
Query: 95 NKPIVLCDDAGEADQSSSKKRRTGQQLSSDVQSDESKEVK--LTCAICISTMEEETSTIC 268
N+ I L ++ E S+ ++ + DE KE K L C +C +E T C
Sbjct: 748 NERIKLEEEYEEVKNEVSELTSETEETTIQKLQDEIKECKAILKCGVCFDRPKEVVITKC 807
Query: 269 GHIFCKKCITNAIH-RWKRCPTCRKKLAINNIHRIYI 376
H+FC CI + R ++CP C +++ + I
Sbjct: 808 FHLFCSPCIQRNLEIRHRKCPGCGTPFGQSDVREVKI 844
>sp|A2ZAC2|BRE1B_ORYSI E3 ubiquitin-protein ligase BRE1-like 2
OS=Oryza sativa subsp. indica GN=BRE1B PE=3 SV=2
Length = 844
Score = 44.3 bits (103), Expect = 7e-04
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +2
Query: 95 NKPIVLCDDAGEADQSSSKKRRTGQQLSSDVQSDESKEVK--LTCAICISTMEEETSTIC 268
N+ I L ++ E S+ ++ + DE KE K L C +C +E T C
Sbjct: 748 NERIKLEEEYEEVKNEVSELTSETEETTIQKLQDEIKECKAILKCGVCFDRPKEVVITKC 807
Query: 269 GHIFCKKCITNAIH-RWKRCPTCRKKLAINNIHRIYI 376
H+FC CI + R ++CP C +++ + I
Sbjct: 808 FHLFCSPCIQRNLEIRHRKCPGCGTPFGQSDVREVKI 844
>sp|Q1ACD5|TRIM5_SAGOE Tripartite motif-containing protein 5
OS=Saguinus oedipus GN=TRIM5 PE=3 SV=1
Length = 494
Score = 43.9 bits (102), Expect = 9e-04
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 212 KLTCAICISTMEEETSTICGHIFCKKCIT-----NAIHRWKR-CPTCRKKLAINNI 361
++TC IC+ + E S CGH FC+ CIT + H+ +R CP CR N+
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTPHQGERSCPLCRMSYPSENL 67
>sp|Q5C8U1|TRIM5_SAGLB Tripartite motif-containing protein 5
OS=Saguinus labiatus GN=TRIM5 PE=2 SV=1
Length = 494
Score = 43.9 bits (102), Expect = 9e-04
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 212 KLTCAICISTMEEETSTICGHIFCKKCIT-----NAIHRWKR-CPTCRKKLAINNI 361
++TC IC+ + E S CGH FC+ CIT + H+ +R CP CR N+
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTPHQGERSCPLCRMSYPSENL 67
>sp|Q28GL3|RNFT1_XENTR RING finger and transmembrane
domain-containing protein 1 OS=Xenopus tropicalis
GN=rnft1 PE=2 SV=1
Length = 416
Score = 43.9 bits (102), Expect = 9e-04
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +2
Query: 125 GEADQSSSKKRR--TGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCIT 298
G+ SS+ R T + + EV CAIC + + +C H+FC++CI+
Sbjct: 322 GQRKTSSNSLRLFLTQPNYGAAATKSQCSEVDGMCAICQAEFIKPIVLVCQHVFCEECIS 381
Query: 299 NAIHRWKRCPTCRKKLAINNIHR 367
++ K CP CR ++ N H+
Sbjct: 382 LWFNKEKTCPLCRTVIS-NQSHK 403
>sp|Q9DCN7|RNFT1_MOUSE RING finger and transmembrane
domain-containing protein 1 OS=Mus musculus GN=Rnft1
PE=2 SV=1
Length = 395
Score = 43.9 bits (102), Expect = 9e-04
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 221 CAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCR 337
C IC + ++ C HIFC++CIT +R K CP CR
Sbjct: 335 CTICQAEFQKPVLLFCQHIFCEECITLWFNREKTCPLCR 373
>sp|E1B7X3|R146A_BOVIN E3 ubiquitin-protein ligase RNF146-A OS=Bos
taurus GN=RNF146A PE=3 SV=1
Length = 346
Score = 43.9 bits (102), Expect = 9e-04
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 125 GEADQSSSK---KRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCI 295
GE D S + R+ + S+ S E CAIC+ T S C H+FC C+
Sbjct: 6 GETDHSINMLPTNRKANESCSNTAPSLTVPE----CAICLQTCVHPVSLPCKHVFCYLCV 61
Query: 296 TNAIHRWKRCPTCRKKL 346
A KRC CR+++
Sbjct: 62 KGASWLGKRCALCRQEI 78
>sp|Q69ZS0|PZRN3_MOUSE E3 ubiquitin-protein ligase PDZRN3 OS=Mus
musculus GN=Pdzrn3 PE=1 SV=3
Length = 1063
Score = 43.9 bits (102), Expect = 9e-04
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 194 DESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPT-CRKKLAINNIHRI 370
D + L CA+C +E+ +T CGH+FC C+ + + CP CR +L+ ++ +
Sbjct: 9 DGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHV 68
>sp|Q9UPQ7|PZRN3_HUMAN E3 ubiquitin-protein ligase PDZRN3 OS=Homo
sapiens GN=PDZRN3 PE=1 SV=2
Length = 1066
Score = 43.9 bits (102), Expect = 9e-04
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 194 DESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPT-CRKKLAINNIHRI 370
D + L CA+C +E+ +T CGH+FC C+ + + CP CR +L+ ++ +
Sbjct: 9 DGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHV 68
>sp|Q14527|HLTF_HUMAN Helicase-like transcription factor OS=Homo
sapiens GN=HLTF PE=1 SV=2
Length = 1009
Score = 43.9 bits (102), Expect = 9e-04
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 221 CAICISTMEEETSTICGHIFCKKCITNAIHRWK---RCPTCRKKLAINNI 361
CAIC+ ++ T C H+FCK CI I + +CP CR + +N+
Sbjct: 760 CAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNL 809
>sp|Q5REG4|DTX3_PONAB Protein deltex-3 OS=Pongo abelii GN=DTX3 PE=2
SV=1
Length = 347
Score = 43.9 bits (102), Expect = 9e-04
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 194 DESKEVKLTCAICISTMEE-ETSTICGHIFCKKCITNAIHRWKRCPTC 334
+E++E + TC IC+ ++ +T C H FC+ CIT A+ K CP C
Sbjct: 155 EEAEEQESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
>sp|Q8N9I9|DTX3_HUMAN Protein deltex-3 OS=Homo sapiens GN=DTX3 PE=2
SV=2
Length = 347
Score = 43.9 bits (102), Expect = 9e-04
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 194 DESKEVKLTCAICISTMEE-ETSTICGHIFCKKCITNAIHRWKRCPTC 334
+E++E + TC IC+ ++ +T C H FC+ CIT A+ K CP C
Sbjct: 155 EEAEEQESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVKKACPMC 202
>sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1
OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2
Length = 675
Score = 43.9 bits (102), Expect = 9e-04
Identities = 25/93 (26%), Positives = 41/93 (44%)
Frame = +2
Query: 86 VPPNKPIVLCDDAGEADQSSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTI 265
VP KP GE ++ + G S++ + + + L C IC+ +++ T
Sbjct: 10 VPAVKPDPRTSSVGEG--ANRHENDDGGSGGSEIGAPDLDK-DLLCPICMQIIKDAFLTA 66
Query: 266 CGHIFCKKCITNAIHRWKRCPTCRKKLAINNIH 364
CGH FC CI + CP C + L N ++
Sbjct: 67 CGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLY 99
>sp|Q5RF77|CHFR_PONAB E3 ubiquitin-protein ligase CHFR OS=Pongo
abelii GN=CHFR PE=2 SV=1
Length = 571
Score = 43.9 bits (102), Expect = 9e-04
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Frame = +2
Query: 146 SKKRRTGQQLSSDVQSDESK----EVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIH 310
++ RR Q + DV++ K E LTC IC + + S C H FC C + +
Sbjct: 183 AQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWME 242
Query: 311 RWKRCPTCR-------KKLAINNIHRIYI 376
R CPTCR K +NN+ Y+
Sbjct: 243 RSSLCPTCRCPVERICKNHILNNLVEAYL 271
>sp|Q96EP1|CHFR_HUMAN E3 ubiquitin-protein ligase CHFR OS=Homo
sapiens GN=CHFR PE=1 SV=2
Length = 664
Score = 43.9 bits (102), Expect = 9e-04
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Frame = +2
Query: 146 SKKRRTGQQLSSDVQSDESK----EVKLTCAICISTMEEETSTI-CGHIFCKKCITNAIH 310
++ RR Q + DV++ K E LTC IC + + S C H FC C + +
Sbjct: 275 AQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWME 334
Query: 311 RWKRCPTCR-------KKLAINNIHRIYI 376
R CPTCR K +NN+ Y+
Sbjct: 335 RSSLCPTCRCPVERICKNHILNNLVEAYL 363
>sp|Q07457|BRE1_YEAST E3 ubiquitin-protein ligase BRE1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=BRE1 PE=1 SV=1
Length = 700
Score = 43.9 bits (102), Expect = 9e-04
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 221 CAICISTMEEETSTICGHIFCKKCITNAI-HRWKRCPTCRKKLAINNIHRIYI 376
C++C + CGH+FC+ C + R ++CPTC K + N++ +++
Sbjct: 648 CSLCSKNWKNMAIKTCGHVFCENCCKERLAARMRKCPTCNKAFSSNDLLTVHL 700
>sp|Q4WDD7|BRE1_ASPFU E3 ubiquitin-protein ligase bre1
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=bre1 PE=3 SV=2
Length = 725
Score = 43.9 bits (102), Expect = 9e-04
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 131 ADQSSSKKRRTGQQLSSDVQSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAI- 307
AD S + + L + E C +C + CGH+FCK+C+ +
Sbjct: 643 ADTKKSLENWKNKSLGNSSSEYEMLRSLALCTVCRRNFKNTAIKTCGHVFCKECVEERLT 702
Query: 308 HRWKRCPTCRKKLAINNIH 364
R ++CP C + NN H
Sbjct: 703 SRSRKCPNCNRSFG-NNDH 720
>sp|Q6J6J0|BRCA1_PONPY Breast cancer type 1 susceptibility protein
homolog OS=Pongo pygmaeus GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 43.9 bits (102), Expect = 9e-04
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 215 LTCAICISTMEEETSTICGHIFCKKCITNAIHRWK---RCPTCRKKL 346
L C IC+ ++E ST C HIFCK C+ +++ K +CP C+ +
Sbjct: 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68
>sp|Q9GKK8|BRCA1_PANTR Breast cancer type 1 susceptibility protein
homolog OS=Pan troglodytes GN=BRCA1 PE=2 SV=2
Length = 1863
Score = 43.9 bits (102), Expect = 9e-04
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 215 LTCAICISTMEEETSTICGHIFCKKCITNAIHRWK---RCPTCRKKL 346
L C IC+ ++E ST C HIFCK C+ +++ K +CP C+ +
Sbjct: 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68
>sp|P38398|BRCA1_HUMAN Breast cancer type 1 susceptibility protein
OS=Homo sapiens GN=BRCA1 PE=1 SV=2
Length = 1863
Score = 43.9 bits (102), Expect = 9e-04
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 215 LTCAICISTMEEETSTICGHIFCKKCITNAIHRWK---RCPTCRKKL 346
L C IC+ ++E ST C HIFCK C+ +++ K +CP C+ +
Sbjct: 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68
>sp|Q6J6I8|BRCA1_GORGO Breast cancer type 1 susceptibility protein
homolog OS=Gorilla gorilla gorilla GN=BRCA1 PE=3 SV=1
Length = 1863
Score = 43.9 bits (102), Expect = 9e-04
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 215 LTCAICISTMEEETSTICGHIFCKKCITNAIHRWK---RCPTCRKKL 346
L C IC+ ++E ST C HIFCK C+ +++ K +CP C+ +
Sbjct: 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68
>sp|Q8GW10|BAH1L_ARATH Probable E3 ubiquitin-protein ligase
BAH1-like OS=Arabidopsis thaliana GN=RF178 PE=2 SV=1
Length = 335
Score = 43.9 bits (102), Expect = 9e-04
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 11/56 (19%)
Frame = +2
Query: 206 EVKLTCAICISTMEEETSTICGHIFCKKCITNAIH-----------RWKRCPTCRK 340
E LTCAIC+ T+ + CGHIFC C +A R +CP CR+
Sbjct: 226 EYDLTCAICLETVFNPYALKCGHIFCNSCACSAASVLIFQGIKAAPRHSKCPICRE 281
>sp|Q9UKV5|AMFR2_HUMAN E3 ubiquitin-protein ligase AMFR OS=Homo
sapiens GN=AMFR PE=1 SV=2
Length = 643
Score = 43.9 bits (102), Expect = 9e-04
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 221 CAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKLAINNIHRI 370
CAIC +M+ CGH+F C+ + + + CPTCR L I + +R+
Sbjct: 341 CAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRV 390
