miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O22773|TL16_ARATH Thylakoid lumenal 16.5 kDa protein,
chloroplastic OS=Arabidopsis thaliana GN=At4g02530 PE=1
SV=3
Length = 216
Score = 55.8 bits (133), Expect = 8e-08
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +2
Query: 140 RRGLAISLVTTSFLFSLGGGEKSG-GANAAILEADDDVELLEKVKKDRKKRLERQGI 307
RR L++ +++ L ++ ANAAILEADDD ELLEKVK+DRKKR+ERQ +
Sbjct: 45 RRELSLGFMSSLVAIGLVSNDRRRHDANAAILEADDDEELLEKVKQDRKKRIERQAV 101
>sp|P81834|TL16_SPIOL Thylakoid lumenal 13.3 kDa protein (Fragment)
OS=Spinacia oleracea PE=1 SV=2
Length = 30
Score = 46.2 bits (108), Expect = 6e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +2
Query: 224 AILEADDDVELLEKVKKDRKKRLERQG 304
A LE +DD+ELLEKVK+DRKKRLERQG
Sbjct: 1 APLEDEDDLELLEKVKRDRKKRLERQG 27
