miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q791B0|UBL5_PSAOB Ubiquitin-like protein 5 OS=Psammomys obesus
           GN=UBL5 PE=3 SV=1
          Length = 73

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   CNDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
           CNDRLGKKVRVK N+DDTI DLKKLIAAQTGT
Sbjct: 6   CNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGT 37




>sp|Q9EPV8|UBL5_MOUSE Ubiquitin-like protein 5 OS=Mus musculus
           GN=Ubl5 PE=1 SV=1
          Length = 73

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   CNDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
           CNDRLGKKVRVK N+DDTI DLKKLIAAQTGT
Sbjct: 6   CNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGT 37




>sp|Q6EGX7|UBL5_MESAU Ubiquitin-like protein 5 OS=Mesocricetus
           auratus GN=UBL5 PE=3 SV=1
          Length = 73

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   CNDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
           CNDRLGKKVRVK N+DDTI DLKKLIAAQTGT
Sbjct: 6   CNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGT 37




>sp|Q9BZL1|UBL5_HUMAN Ubiquitin-like protein 5 OS=Homo sapiens
           GN=UBL5 PE=1 SV=1
          Length = 73

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   CNDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
           CNDRLGKKVRVK N+DDTI DLKKLIAAQTGT
Sbjct: 6   CNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGT 37




>sp|Q3T0Z3|UBL5_BOVIN Ubiquitin-like protein 5 OS=Bos taurus GN=UBL5
           PE=3 SV=1
          Length = 73

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   CNDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
           CNDRLGKKVRVK N+DDTI DLKKLIAAQTGT
Sbjct: 6   CNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGT 37




>sp|Q9V998|UBL5_DROME Ubiquitin-like protein 5 OS=Drosophila
           melanogaster GN=ubl PE=3 SV=1
          Length = 73

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 29/32 (90%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   CNDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
           CNDRLGKKVRVK N DDTI DLKKLIAAQTGT
Sbjct: 6   CNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGT 37




>sp|Q7SXF2|UBL5_DANRE Ubiquitin-like protein 5 OS=Danio rerio
           GN=ubl5 PE=3 SV=1
          Length = 73

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   CNDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
           CNDRLGKKVRVK N +DTI DLKKLIAAQTGT
Sbjct: 6   CNDRLGKKVRVKCNQEDTIGDLKKLIAAQTGT 37




>sp|Q9FGZ9|UBL5_ARATH Ubiquitin-like protein 5 OS=Arabidopsis
          thaliana GN=UBL5 PE=1 SV=1
          Length = 73

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +1

Query: 4  NDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
          NDRLGKKVRVK N DDTI DLKKL+AAQTGT
Sbjct: 7  NDRLGKKVRVKCNDDDTIGDLKKLVAAQTGT 37




>sp|O94650|HUB1_SCHPO Ubiquitin-like modifier hub1
           OS=Schizosaccharomyces pombe (strain ATCC 38366 / 972)
           GN=hub1 PE=1 SV=1
          Length = 73

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = +1

Query: 1   CNDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
           CNDRLGKKVRVK   DDT+ D KKL+AAQTGT
Sbjct: 6   CNDRLGKKVRVKCMPDDTVGDFKKLVAAQTGT 37




>sp|P91302|UBL5_CAEEL Ubiquitin-like protein 5 OS=Caenorhabditis
          elegans GN=ubl-5 PE=2 SV=1
          Length = 73

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 26/31 (83%), Positives = 27/31 (87%)
 Frame = +1

Query: 4  NDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
          NDRLGKKVR+K N  DTI DLKKLIAAQTGT
Sbjct: 7  NDRLGKKVRIKCNPSDTIGDLKKLIAAQTGT 37




>sp|Q54Q03|UBL5_DICDI Ubiquitin-like protein 5 OS=Dictyostelium
          discoideum GN=ubl5 PE=3 SV=1
          Length = 87

 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = +1

Query: 1  CNDRLGKKVRVKYNSDDTIRDLKKLIAAQTG 93
          CNDRLG KVRVK NSDDTI DLKK+++AQ G
Sbjct: 6  CNDRLGNKVRVKVNSDDTIGDLKKVLSAQIG 36




>sp|Q756X3|HUB1_ASHGO Ubiquitin-like modifier HUB1 OS=Ashbya
          gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
          NRRL Y-1056) GN=HUB1 PE=4 SV=1
          Length = 73

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = +1

Query: 4  NDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
          NDRLGKK+RVK  S D++ DLKK++A Q GT
Sbjct: 7  NDRLGKKLRVKCLSTDSVGDLKKVLAVQLGT 37




>sp|Q6BUP7|HUB1_DEBHA Ubiquitin-like modifier HUB1 OS=Debaryomyces
          hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
          0083 / IGC 2968) GN=HUB1 PE=4 SV=1
          Length = 73

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +1

Query: 4  NDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
          NDRLGKK++VK    DTI DLKK+I+ Q GT
Sbjct: 7  NDRLGKKIKVKCMPTDTIGDLKKIISLQIGT 37




>sp|Q6CU12|HUB1_KLULA Ubiquitin-like modifier HUB1
          OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
          DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=HUB1
          PE=4 SV=1
          Length = 74

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +1

Query: 4  NDRLGKKVRVKYNSDDTIRDLKKLIAAQTGT 96
          NDRLGKKV VK  S+DT+ D KK+++ Q GT
Sbjct: 7  NDRLGKKVNVKCLSEDTVGDFKKVLSVQLGT 37