miRNEST 2.0, an integrative microRNA resource :: BLAST
>sp|Q96MD7|CI085_HUMAN Uncharacterized protein C9orf85 OS=Homo
sapiens GN=C9orf85 PE=1 SV=1
Length = 179
Score = 36.2 bits (82), Expect(2) = 0.001
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +2
Query: 113 WVFLVETGFCYVGQAGLQLLAS 178
+VFLVE GF YVGQAGL+LL S
Sbjct: 158 FVFLVEMGFHYVGQAGLELLTS 179
Score = 25.4 bits (54), Expect(2) = 0.001
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +1
Query: 1 GTISAHCNLCLLGXXXXXXXXXXVAGTTGMSHNTWLI 111
G I AH NL L VAGTTG H+ LI
Sbjct: 121 GRILAHHNLRLPCSSDSPASASRVAGTTGAHHHAQLI 157
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P05783|K1C18_HUMAN Keratin, type I cytoskeletal 18 OS=Homo
sapiens GN=KRT18 PE=1 SV=2
Length = 430
Score = 53.5 bits (127), Expect = 4e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +3
Query: 3 LDKFWSQEIEESTTVVTTQSAEVGAAE 83
LDK+WSQ+IEESTTVVTTQSAEVGAAE
Sbjct: 267 LDKYWSQQIEESTTVVTTQSAEVGAAE 293
>sp|Q5BJY9|K1C18_RAT Keratin, type I cytoskeletal 18 OS=Rattus
norvegicus GN=Krt18 PE=1 SV=3
Length = 423
Score = 46.2 bits (108), Expect = 6e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +3
Query: 3 LDKFWSQEIEESTTVVTTQSAEVGAAE 83
LDK+WSQ+IEESTTVVTT+SAE+ AE
Sbjct: 260 LDKYWSQQIEESTTVVTTKSAEIRDAE 286
>sp|P05784|K1C18_MOUSE Keratin, type I cytoskeletal 18 OS=Mus
musculus GN=Krt18 PE=1 SV=5
Length = 423
Score = 46.2 bits (108), Expect = 6e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +3
Query: 3 LDKFWSQEIEESTTVVTTQSAEVGAAE 83
LDK+WSQ+IEESTTVVTT+SAE+ AE
Sbjct: 260 LDKYWSQQIEESTTVVTTKSAEIRDAE 286
