miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q96MD7|CI085_HUMAN Uncharacterized protein C9orf85 OS=Homo
sapiens GN=C9orf85 PE=1 SV=1
Length = 179
Score = 63.9 bits (154), Expect = 3e-10
Identities = 32/58 (55%), Positives = 38/58 (65%)
Frame = -3
Query: 181 LALSPRLECSGAVIAHCSLDLPGSSNPPTLAPLVTETTGVHHHAC*FFNFL*RLGFYY 8
L L PRLECSG ++AH +L LP SS+ P A V TTG HHHA F FL +GF+Y
Sbjct: 111 LPLLPRLECSGRILAHHNLRLPCSSDSPASASRVAGTTGAHHHAQLIFVFLVEMGFHY 168
>sp|Q5T7P6|TMM78_HUMAN Transmembrane protein 78 OS=Homo sapiens
GN=TMEM78 PE=2 SV=1
Length = 136
Score = 58.9 bits (141), Expect = 1e-08
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = -3
Query: 187 QGLALSPRLECSGAVIAHCSLDLPGSSNPPTLA 89
QGLALSPRLEC GA++ HCSL++PGSS+PPT A
Sbjct: 103 QGLALSPRLECDGAIMIHCSLNIPGSSDPPTSA 135
>sp|Q6ZWE1|CC066_HUMAN Putative uncharacterized protein C3orf66
OS=Homo sapiens GN=C3orf66 PE=5 SV=1
Length = 131
Score = 58.5 bits (140), Expect = 1e-08
Identities = 33/75 (44%), Positives = 39/75 (52%)
Frame = -2
Query: 275 PKVLGLQV*ATAPGXXXXXXXXXXXXXFGTGSCSVSQAGVQWCSHSSLQP*PPRLKQSSH 96
P++LG+ A G SCSV+QAGVQWC SLQ PPR K+ SH
Sbjct: 37 PQILGMLQEAELQGPSGFRPQTPGSLQSHHESCSVAQAGVQWCDLGSLQRLPPRFKRFSH 96
Query: 95 LSSPSN*DYRCSPPR 51
LS + DYR PPR
Sbjct: 97 LSLLNRWDYRHPPPR 111
>sp|Q9BUA6|MYL10_HUMAN Myosin regulatory light chain 10 OS=Homo
sapiens GN=MYL10 PE=2 SV=2
Length = 226
Score = 42.0 bits (97), Expect(2) = 1e-08
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = -3
Query: 187 QGLALSPRLECSGAVIAHCSLDLPGSSNPPTLA 89
+ LALSPRLE +G + AHC+L L GSSN P A
Sbjct: 57 ESLALSPRLERNGMISAHCNLCLTGSSNSPASA 89
Score = 36.2 bits (82), Expect(2) = 1e-08
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -2
Query: 311 NSWAQVIHPHRPPKVLGLQ 255
NSW QVI P RPPKVLGLQ
Sbjct: 8 NSWPQVILPPRPPKVLGLQ 26
>sp|P51957|NEK4_HUMAN Serine/threonine-protein kinase Nek4 OS=Homo
sapiens GN=NEK4 PE=1 SV=2
Length = 841
Score = 55.1 bits (131), Expect = 1e-07
Identities = 27/46 (58%), Positives = 32/46 (69%)
Frame = -3
Query: 187 QGLALSPRLECSGAVIAHCSLDLPGSSNPPTLAPLVTETTGVHHHA 50
Q LALSP+LECSG ++AH +L L GSS+ P A V TGV HHA
Sbjct: 456 QSLALSPKLECSGTILAHSNLRLLGSSDSPASASRVAGITGVCHHA 501
>sp|Q8NDZ0|BEND2_HUMAN BEN domain-containing protein 2 OS=Homo
sapiens GN=BEND2 PE=2 SV=2
Length = 799
Score = 54.7 bits (130), Expect = 2e-07
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = -2
Query: 185 GSCSVSQAGVQWCSHSSLQP*PPRLKQSSHLSSPSN*DYRCSPP 54
GS SV+QAGVQW HSSLQP P LKQ HLS PS+ D R +PP
Sbjct: 80 GSGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRRTPP 123
>sp|Q6UX73|CP089_HUMAN UPF0764 protein C16orf89 OS=Homo sapiens
GN=C16orf89 PE=2 SV=2
Length = 402
Score = 54.3 bits (129), Expect = 2e-07
Identities = 33/56 (58%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = -2
Query: 182 SCSVSQAGVQWCSHSSLQP*PPRLKQSSHLSSPSN*DYRCSPPRLLVFQ-FSVETG 18
S SV+QAGVQW + SLQP PP KQ S L PS+ DYR PP L F F VETG
Sbjct: 320 SRSVAQAGVQWRNLGSLQPLPPGFKQFSCLILPSSWDYRSVPPYLANFYIFLVETG 375
>sp|Q8N2A0|CX062_HUMAN Putative uncharacterized protein encoded by
NCRNA00269 OS=Homo sapiens GN=NCRNA00269 PE=5 SV=1
Length = 174
Score = 53.5 bits (127), Expect = 4e-07
Identities = 29/58 (50%), Positives = 33/58 (56%)
Frame = -3
Query: 181 LALSPRLECSGAVIAHCSLDLPGSSNPPTLAPLVTETTGVHHHAC*FFNFL*RLGFYY 8
L L PRLECSG + AH +L L GSSN P A V ETT HH F F GF++
Sbjct: 75 LTLLPRLECSGTISAHYNLRLLGSSNSPVSASQVAETTEACHHTRLIFVFSVETGFHH 132
Score = 52.0 bits (123), Expect = 1e-06
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = -3
Query: 187 QGLALSPRLECSGAVIAHCSLDLPGSSNPPTLA 89
QGLAL PR+E SGA++AHC +DLP SS+PPT A
Sbjct: 26 QGLALLPRVEWSGAILAHCIVDLPSSSDPPTSA 58
>sp|Q8IV13|CCNJL_HUMAN Cyclin-J-like protein OS=Homo sapiens
GN=CCNJL PE=2 SV=3
Length = 435
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/44 (59%), Positives = 29/44 (65%), Gaps = 7/44 (15%)
Frame = -3
Query: 175 LSPRLECSGAVIAHCSLDLPGSSN-------PPTLAPLVTETTG 65
LSPRL+CSG + AHC+L LPGSSN PP P V ETTG
Sbjct: 99 LSPRLKCSGMISAHCNLHLPGSSNSPASAPHPPPTPPQVAETTG 142
>sp|Q9NZV5|SELN_HUMAN Selenoprotein N OS=Homo sapiens GN=SEPN1 PE=1
SV=5
Length = 590
Score = 51.6 bits (122), Expect = 2e-06
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = -2
Query: 188 TGSCSVSQAGVQWCSHSSLQP*PPRLKQSSHLS 90
TGSCSV+Q GVQWCSHSSLQP P L SS LS
Sbjct: 100 TGSCSVTQTGVQWCSHSSLQPQLPWLNUSSCLS 132
>sp|A6NIU2|CU037_HUMAN Putative uncharacterized protein C21orf37
OS=Homo sapiens GN=C21orf37 PE=5 SV=1
Length = 74
Score = 51.6 bits (122), Expect = 2e-06
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = -3
Query: 187 QGLALSPRLECSGAVIAHCSLDLPGSSNPPTLAPLVTETT 68
+ L LSPRLE SGA+ AHCSLDL S+NPP A V ETT
Sbjct: 21 RSLILSPRLEYSGAITAHCSLDLLDSTNPPASAFWVVETT 60
>sp|Q86U02|CN165_HUMAN Putative uncharacterized protein C14orf165
OS=Homo sapiens GN=C14orf165 PE=4 SV=1
Length = 117
Score = 51.6 bits (122), Expect = 2e-06
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = -2
Query: 188 TGSCSVSQAGVQWCSHSSLQP*PPRLKQSSHLSSPSN*DYRCSPPRLLVF 39
T S V+Q GV WC+ SLQP PP K+ S LS PS+ DYR +PP L F
Sbjct: 52 TASGFVAQTGVHWCNLGSLQPLPPGFKRFSCLSLPSSLDYRHAPPCLANF 101
>sp|Q9P1C3|YN010_HUMAN Putative uncharacterized protein PRO2829
OS=Homo sapiens GN=PRO2829 PE=5 SV=1
Length = 46
Score = 50.1 bits (118), Expect = 4e-06
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +2
Query: 236 RVQWLTPVILALWEDDVGGSLEPRSSRLAWAT 331
RV WL PV+LALWE +VGGSLE RS R AW T
Sbjct: 14 RVWWLMPVVLALWEAEVGGSLEVRSLRPAWPT 45
>sp|Q6B4Z3|UTY_PANTR Histone demethylase UTY OS=Pan troglodytes GN=UTY
PE=2 SV=1
Length = 1079
Score = 50.1 bits (118), Expect = 4e-06
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = -2
Query: 167 QAGVQWCSHSSLQP*PPRLKQSSHLSSPSN*DYRCSPPRLLVFQFSVETG 18
+AG+QWC SSLQP PP K+ SHLS P++ +YR P F VETG
Sbjct: 995 RAGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTNFCIFVETG 1044
>sp|Q68CZ1|FTM_HUMAN Protein fantom OS=Homo sapiens GN=RPGRIP1L PE=1
SV=2
Length = 1315
Score = 50.1 bits (118), Expect = 4e-06
Identities = 25/45 (55%), Positives = 28/45 (62%)
Frame = -3
Query: 187 QGLALSPRLECSGAVIAHCSLDLPGSSNPPTLAPLVTETTGVHHH 53
Q LALSP L CS A+ AHC+ LPGSS+ P A V TG HH
Sbjct: 1098 QSLALSPGLGCSSAISAHCNFRLPGSSDFPASASQVDGITGACHH 1142
>sp|Q96CB5|CH044_HUMAN Putative uncharacterized protein C8orf44
OS=Homo sapiens GN=C8orf44 PE=2 SV=2
Length = 159
Score = 49.7 bits (117), Expect = 6e-06
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +2
Query: 236 RVQWLTPVILALWEDDVGGSLEPRSSRLAWAT*GDPISTKNT 361
R +WL PVI ALWE G S E RSS+ AW T +PI TKNT
Sbjct: 37 RARWLMPVIPALWEAKAGRSPEVRSSKPAWPTWRNPIFTKNT 78
>sp|Q8WTZ3|YS049_HUMAN Zinc finger protein ENSP00000375192 OS=Homo
sapiens PE=2 SV=1
Length = 238
Score = 48.9 bits (115), Expect = 1e-05
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = -3
Query: 181 LALSPRLECSGAVIAHCSLDLPGSSNPPTLAPLVTETTGVHHHAC*FFNFL*RLGFYY 8
L LSP+LEC+GA+ HC+L L GSS+ G HHA F FL GF++
Sbjct: 100 LTLSPKLECNGAISVHCNLRLLGSSDSLASTSQAAGIAGACHHAQLIFVFLVETGFHH 157
>sp|A6NJG6|ARGFX_HUMAN Arginine-fifty homeobox OS=Homo sapiens
GN=ARGFX PE=2 SV=1
Length = 315
Score = 48.5 bits (114), Expect = 1e-05
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -3
Query: 175 LSPRLECSGAVIAHCSLDLPGSSNPPTLAPLVTETTGV 62
L +LECSG V A+CSL+LPGS++PPT A V TT +
Sbjct: 38 LLSKLECSGTVSAYCSLNLPGSTDPPTSASRVAATTAI 75
>sp|Q92918|M4K1_HUMAN Mitogen-activated protein kinase kinase kinase
kinase 1 OS=Homo sapiens GN=MAP4K1 PE=1 SV=1
Length = 833
Score = 47.4 bits (111), Expect = 3e-05
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = -3
Query: 172 SPRLECSGAVIAHCSLDLPGSSNPPTLAPLVTETTGV 62
SPRLECSG + HC+L LPGSSN P A V TG+
Sbjct: 797 SPRLECSGTISPHCNLLLPGSSNSPASASRVAGITGL 833
>sp|Q5H9K5|ZMAT1_HUMAN Zinc finger matrin-type protein 1 OS=Homo
sapiens GN=ZMAT1 PE=2 SV=1
Length = 638
Score = 46.2 bits (108), Expect = 6e-05
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -3
Query: 166 RLECSGAVIAHCSLDLPGSSNPPTLAPLVTETT 68
RLECSGA+ AHCSL LPGSS+ P A + TT
Sbjct: 8 RLECSGAISAHCSLHLPGSSDSPASASQIAGTT 40
>sp|Q96M98|PACRG_HUMAN Parkin coregulated gene protein OS=Homo
sapiens GN=PACRG PE=1 SV=2
Length = 296
Score = 46.2 bits (108), Expect = 6e-05
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -3
Query: 169 PRLECSGAVIAHCSLDLPGSSNPPTLAPLVTE 74
PRLECSGA++A C+LD GSS+PPT A V E
Sbjct: 210 PRLECSGAIMARCNLDHLGSSDPPTSASQVAE 241
>sp|Q8NHA8|OR1FC_HUMAN Olfactory receptor 1F12 OS=Homo sapiens
GN=OR1F12 PE=3 SV=1
Length = 337
Score = 44.3 bits (103), Expect = 2e-04
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1
Query: 235 PGAVAHTCNPSTLGGRCGWI 294
PGAVAH CNPSTLGGR GWI
Sbjct: 308 PGAVAHACNPSTLGGRGGWI 327
>sp|Q8N976|YG039_HUMAN Putative uncharacterized protein FLJ38264
OS=Homo sapiens PE=5 SV=1
Length = 141
Score = 43.9 bits (102), Expect = 3e-04
Identities = 24/47 (51%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 145 VIAHCS-LDLPGSSNPPTLAPLVTETTGVHHHAC*FFNFL*RLGFYY 8
+ AHCS L GSS PTLA V E TG HHH F FL GF++
Sbjct: 2 ISAHCSNLHFLGSSESPTLASQVGEITGTHHHTRLIFVFLVETGFHH 48
>sp|Q8N9N2|ASCC1_HUMAN Activating signal cointegrator 1 complex
subunit 1 OS=Homo sapiens GN=ASCC1 PE=1 SV=1
Length = 400
Score = 43.5 bits (101), Expect = 4e-04
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = -3
Query: 187 QGLALSPRLECSGAVIAHCSLDLPGSSNPPTLAPLVTETTGV 62
+ AL PRLE + A+ AHC+L LPGSS+ P A V TGV
Sbjct: 347 KSFALLPRLEYNDAISAHCNLCLPGSSDSPASASQVAGITGV 388
>sp|Q6NY19|KANK3_HUMAN KN motif and ankyrin repeat_field domain-containing
protein 3 OS=Homo sapiens GN=KANK3 PE=2 SV=1
Length = 840
Score = 43.1 bits (100), Expect = 5e-04
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = -2
Query: 170 SQAGVQWCSHSSLQP*PPRLKQSSHLSSPSN*DYR-CSPPRL 48
+QAGVQ + SSLQP PPR K+ S LS PS+ DY C P RL
Sbjct: 793 TQAGVQRHNLSSLQPPPPRFKKFSCLSLPSSWDYNSCEPSRL 834
>sp|P78563|RED1_HUMAN Double-stranded RNA-specific editase 1 OS=Homo
sapiens GN=ADARB1 PE=1 SV=1
Length = 741
Score = 42.7 bits (99), Expect = 7e-04
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = -2
Query: 185 GSCSVSQAGVQWCSHSSLQP*PPRLKQSSHLSSPS 81
GS S +QAGVQWC+H SLQP PP L LS PS
Sbjct: 466 GSRSYTQAGVQWCNHGSLQPRPPGL-----LSDPS 495
