miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9SGS5|Y1607_ARATH Uncharacterized protein At1g76070
OS=Arabidopsis thaliana GN=At1g76070 PE=1 SV=1
Length = 272
Score = 66.6 bits (161), Expect = 1e-10
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Frame = +2
Query: 44 QSKLRNKFMKAITITFQNAPFSPGRDHKFRSENSNTKWGAKTHAVGKGFSGPMVTMIPYE 223
++KL KA++ + PFSPGRD + ++ T A FSGPMV ++P
Sbjct: 15 KNKLLKMLPKAMSFGHRVPPFSPGRDLHHNNHHNYTA------ANKMFFSGPMVPLVPNA 68
Query: 224 ARRKPKDGGGNETQEPTSPKISCMGQXXXXXXXXXXXXXXDL---FTPKV---------- 364
AR + ++ EPTSPK+SC+GQ PK+
Sbjct: 69 ARVR-RNKSDAVWDEPTSPKVSCIGQIKLGKSKCPTGKKNKAPSSLIPKISKTSTSSLTK 127
Query: 365 -DTEVKRSKFQRIFS-QRSKAKFAERKSDGSGF--VDE------GNNKAPPMGDMRRFAS 514
D + + SK + IFS + + RKS + DE P +G M++FAS
Sbjct: 128 EDEKGRLSKIKSIFSFSPASGRNTSRKSHPTAVSAADEHPVTVVSTAAVPSLGQMKKFAS 187
Query: 515 GREAFSKFDWKAVIEPEE 568
R+A FDW ++ EE
Sbjct: 188 SRDALGDFDWAVEMKHEE 205