miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O75643|U520_HUMAN U5 small nuclear ribonucleoprotein 200 kDa
helicase OS=Homo sapiens GN=SNRNP200 PE=1 SV=2
Length = 2136
Score = 60.5 bits (145), Expect = 3e-09
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +2
Query: 5 PFFTSEHIKRCTEKGVESIFDIMEMEDEDR 94
P FTSEHIKRCT+KGVES+FDIMEMEDE+R
Sbjct: 1964 PHFTSEHIKRCTDKGVESVFDIMEMEDEER 1993
>sp|Q9VUV9|U520_DROME Putative U5 small nuclear ribonucleoprotein 200
kDa helicase OS=Drosophila melanogaster GN=CG5931 PE=2
SV=4
Length = 2142
Score = 49.3 bits (116), Expect = 7e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 5 PFFTSEHIKRCTEKGVESIFDIMEMEDEDR 94
P F+ E +KRCTEK +E++FDIME+EDEDR
Sbjct: 1968 PHFSPEIVKRCTEKKIETVFDIMELEDEDR 1997