miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 123 bits (62), Expect = 5e-28
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgacgcagatttagtactaaattagtataaattttgt 70
|||||||| |||| ||||||||||||||| ||| |||||||||| |||| |||||||||
Sbjct: 5 tactcccttcgtcttaaaataagtgacgcatattcagtactaaatgagtacaaattttgt 64
Query: 71 actagatcaacgacacttattttgggacagagggagta 108
||||||||||||||||||||||| |||| |||||||||
Sbjct: 65 actagatcaacgacacttattttaggacggagggagta 102
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgacgcagatttagtactaaatt 56
|||||||||||||| |||||||||| || ||| |||||| |||||
Sbjct: 102 tactccctccgtcctaaaataagtgtcgttgatctagtacaaaatt 57
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 115 bits (58), Expect = 1e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgacgcagatttagtactaaattagtataaattttgt 70
||||||||||||||||||||||||| |||| |||||||||||| |||||| |||| | |
Sbjct: 5 tactccctccgtcccaaaataagtgtcgcaaatttagtactaagttagtacaaatataat 64
Query: 71 actagatcaacgacacttattttgggacagagggagta 108
|||||| || |||||||||||||||||| |||||||||
Sbjct: 65 actagagcagcgacacttattttgggacggagggagta 102
Score = 67.9 bits (34), Expect = 3e-11
Identities = 82/98 (83%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgacgcagatttagtactaaattagtataaattttgt 70
||||||||||||||||||||||||| ||| | | ||||| || ||| ||| || || ||
Sbjct: 102 tactccctccgtcccaaaataagtgtcgctgctctagtattatatttgtactaacttagt 43
Query: 71 actagatcaacgacacttattttgggacagagggagta 108
|||| || |||||||||||||||||| |||||||||
Sbjct: 42 actaaatttgcgacacttattttgggacggagggagta 5
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 93.7 bits (47), Expect = 5e-19
Identities = 86/99 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgacgcagatttagtactaaattagtataaattttgt 70
||||||||| ||||||||||||||| | || ||||| |||||||||||| ||||||| |
Sbjct: 102 tactccctctgtcccaaaataagtgtcacaaatttataactaaattagtacaaattttat 43
Query: 71 actagatcaacgacacttattttgggacagagggagtac 109
|||| |||| |||||||||||||| || ||||||||||
Sbjct: 42 actaaatcagcgacacttattttgatacggagggagtac 4
Score = 65.9 bits (33), Expect = 1e-10
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 8 ttgtactccctccgtcccaaaataagtgacgcagatttagtactaaattagtataaattt 67
||||||||||||||| ||||||||||| ||| ||||||||| ||||| ||| |||||
Sbjct: 2 ttgtactccctccgtatcaaaataagtgtcgctgatttagtataaaatttgtactaattt 61
Query: 68 tgtactagatcaacgacacttattttgggacagagggagta 108
|| || || |||||||||||||||||||||||||||
Sbjct: 62 agttataaatttgtgacacttattttgggacagagggagta 102
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 91.7 bits (46), Expect = 2e-18
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgacgcagatttagtactaaattagtataaattttgt 70
||||||||||||| |||||||||| | || |||||||| ||| ||||||||||||| ||
Sbjct: 5 tactccctccgtcttaaaataagtgtcacaaatttagtattaagttagtataaatttagt 64
Query: 71 actagatcaacgacacttattttgggacagagggagtactat 112
|||| | || |||||||||||||||||| ||| ||||||||
Sbjct: 65 actaaaacagcgacacttattttgggacgaaggaagtactat 106
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgacgcagatttagtactaaatt 56
||||| ||| |||||||||||||||| ||| | ||||||||||||||
Sbjct: 103 gtacttccttcgtcccaaaataagtgtcgctgttttagtactaaatt 57
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 77.8 bits (39), Expect = 3e-14
Identities = 82/95 (86%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 14 tccctccgtcccaaaataagtgacgcagatttagtactaaattagtataaattttgtact 73
|||||||||||||||||||||| | |||||||||| || |||||||||| ||||| |
Sbjct: 8 tccctccgtcccaaaataagtgtcattgatttagtacaaagttagtataaa-gttgtatt 66
Query: 74 agatcaacgacacttattttgggacagagggagta 108
| |||| |||||||||||||||||| | |||||||
Sbjct: 67 aaatcagcgacacttattttgggacggcgggagta 101
Score = 69.9 bits (35), Expect = 7e-12
Identities = 81/95 (85%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgacgcagatttagtactaaattagtataaattttgt 70
||||||| ||||||||||||||||| ||| |||||| ||| | ||| || || |||||
Sbjct: 101 tactcccgccgtcccaaaataagtgtcgctgatttaatacaacttta-tactaactttgt 43
Query: 71 actagatcaacgacacttattttgggacagaggga 105
|||| ||||| ||||||||||||||||| ||||||
Sbjct: 42 actaaatcaatgacacttattttgggacggaggga 8
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 60.0 bits (30), Expect = 7e-09
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 9 tgtactccctccgtcccaaaataagtgacgcagatttagtactaaattagtataaatttt 68
||||||||||| ||||||||||||||| || | ||||| || ||| ||||| |||||||
Sbjct: 104 tgtactccctcggtcccaaaataagtgtcgtaaatttataaccaaactagtacaaatttt 45
Query: 69 gtactagatcaacgacacttattttgggacagagggag 106
||||| || ||||||| |||||| ||| |||||||
Sbjct: 44 atactaaatgggcgacactcattttgagacggagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 80 acgacacttattttgggacagagggagtac 109
||||||||||||||||||| ||||||||||
Sbjct: 74 acgacacttattttgggaccgagggagtac 103
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgacgcagatttagtac 50
||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 82 tactcccaccgtcccaaaataagtgtcgctgatttagtac 43
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 66 tttgtactagatcaacgacacttattttgggacagagggagta 108
||||||||| |||| |||||||||||||||||| | |||||||
Sbjct: 40 tttgtactaaatcagcgacacttattttgggacggtgggagta 82
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgacgcagatttagtac 50
|||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 106 tactacctccgtcccaaaataagtgtcgctgatttagtac 67
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 66 tttgtactagatcaacgacacttattttgggacagagggagta 108
||||||||| |||| |||||||||||||||||| |||| ||||
Sbjct: 64 tttgtactaaatcagcgacacttattttgggacggaggtagta 106
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgac 37
||||||||||||||||||||||||||||
Sbjct: 112 gtactccctccgtcccaaaataagtgac 85
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 84 cacttattttgggacagaggga 105
||||||||||||||||||||||
Sbjct: 29 cacttattttgggacagaggga 8
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 84 cacttattttgggacagagggagtac 109
||||||||||||||| ||||||||||
Sbjct: 87 cacttattttgggacggagggagtac 112
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgac 37
||||||||||||||||||||||||||||
Sbjct: 112 gtactccctccgtcccaaaataagtgac 85
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 84 cacttattttgggacagagggagtacta 111
||||||||||||||| ||||||||||||
Sbjct: 87 cacttattttgggacggagggagtacta 114
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 84 cacttattttgggacagagggagtact 110
|||||||||||||||||||||||||||
Sbjct: 40 cacttattttgggacagagggagtact 66
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgac 37
|||||||||| |||||||||||||||||
Sbjct: 65 gtactccctctgtcccaaaataagtgac 38
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgac 37
|||||||||||||||||||||||||||
Sbjct: 112 tactccctccgtcccaaaataagtgac 86
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 84 cacttattttgggacagagggagta 108
|||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacagagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgac 37
||||||||| |||||||||||||||||
Sbjct: 5 tactccctctgtcccaaaataagtgac 31
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgac 37
|||||||||||||||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgac 74
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgac 37
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgac 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 7 cttgtactccctccgtcccaaaataagtgac 37
||||||||| |||| ||||||||||||||||
Sbjct: 132 cttgtactcgctccatcccaaaataagtgac 102
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
Japonica Group
Length = 246
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||||||||||||||||||||||||
Sbjct: 1 gtactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 84 cacttattttgggacagagggagtac 109
||||||||||||||| ||||||||||
Sbjct: 26 cacttattttgggacggagggagtac 1
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||| ||||||||||||||||||||
Sbjct: 246 gtactacctccgtcccaaaataagtg 221
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||||||||||||||||||||||||
Sbjct: 102 gtactccctccgtcccaaaataagtg 77
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gacacttattttgggacagagggagtac 109
||||||||||||||||| ||||||||||
Sbjct: 75 gacacttattttgggacggagggagtac 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 tgtactccctccgtcccaaaataagtg 35
||||||||||||||| |||||||||||
Sbjct: 3 tgtactccctccgtctcaaaataagtg 29
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 244 tactccctccgtcccaaaataagtg 220
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 83 acacttattttgggacagagggagta 108
|||||||||||||||| |||||||||
Sbjct: 27 acacttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 245 tactccctccgtcccaaaataagtg 221
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||| ||||||||||||||||||||
Sbjct: 243 gtactacctccgtcccaaaataagtg 218
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||| ||||||||||||||||||||
Sbjct: 245 gtactacctccgtcccaaaataagtg 220
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgac 37
||||||||||||||| |||||||||||
Sbjct: 103 tactccctccgtcccgaaataagtgac 77
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtg 77
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 gacacttattttgggacagagggagta 108
||||||||||||||||| |||||||||
Sbjct: 75 gacacttattttgggacggagggagta 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||||| ||||||||||||||||||
Sbjct: 4 gtactccttccgtcccaaaataagtg 29
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtg 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 gacacttattttgggacagagggagta 108
||||||||||||||||| |||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 gacacttattttgggacagagggagta 108
||||||||||||||||| |||||||||
Sbjct: 74 gacacttattttgggacggagggagta 100
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 cttgtactccctccgtcccaaaataagtg 35
|||||||||||||| ||||||||||||||
Sbjct: 105 cttgtactccctccatcccaaaataagtg 77
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 8 ttgtactccctccgtcccaaaataa 32
|||||||||||||||||||||||||
Sbjct: 104 ttgtactccctccgtcccaaaataa 80
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 84 cacttattttgggacagagggagta 108
|||||||||||||||||||||||||
Sbjct: 29 cacttattttgggacagagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgac 37
||||||||||||||||||| ||||||||
Sbjct: 91 gtactccctccgtcccaaattaagtgac 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgac 37
||||||||| |||||||||||||||||
Sbjct: 5 tactccctctgtcccaaaataagtgac 31
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtg 77
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 gacacttattttgggacagagggagta 108
||||||||||||||||| |||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 gacacttattttgggacagagggagta 108
||||||||||||||||| |||||||||
Sbjct: 75 gacacttattttgggacggagggagta 101
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 gacacttattttgggacagagggagta 108
||||||||||||||||| |||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 gacacttattttgggacagagggagta 108
||||||||||||||||| |||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataa 80
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 gacacttattttgggacagagggagta 108
||||||||||||||||| |||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataa 80
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 gacacttattttgggacagagggagta 108
||||||||||||||||| |||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AACV01021306.1/37655-37776 39947:Oryza sativa
Japonica Group
Length = 122
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 cttgtactccctccgtcccaaaata 31
|||||||||||||||||||||||||
Sbjct: 122 cttgtactccctccgtcccaaaata 98
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgac 37
||||||||||||||||||| ||||||||
Sbjct: 114 gtactccctccgtcccaaattaagtgac 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgac 37
|||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtcccaaattaagtgac 31
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 tgtactccctccgtcccaaaataa 32
||||||||||||||||||||||||
Sbjct: 103 tgtactccctccgtcccaaaataa 80
>RF00906;MIR1122;AAAA02014858.1/37527-37621 39946:Oryza sativa
Indica Group
Length = 95
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacagagggagtacta 111
||||||||||||||||||||||||
Sbjct: 25 tattttgggacagagggagtacta 2
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagt 34
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
>RF00906;MIR1122;AAAA02006215.1/494-605 39946:Oryza sativa Indica
Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 ttgtactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 111 ttgtactccctccgtcccaaaata 88
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataag 33
||||||||||||||||||||||||
Sbjct: 94 gtactccctccgtcccaaaataag 71
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataag 27
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa Indica
Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 ttgtactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 111 ttgtactccctccgtcccaaaata 88
>RF00906;MIR1122;AP008209.1/27314174-27314047 39947:Oryza sativa
Japonica Group
Length = 128
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ttgtactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 2 ttgtactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01002422.1/2768-2895 39947:Oryza sativa
Japonica Group
Length = 128
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacagagggagtacta 111
||||||||||||||||||||||||
Sbjct: 25 tattttgggacagagggagtacta 2
>RF00906;MIR1122;AL512546.2/55731-55825 4530:Oryza sativa (rice)
Length = 95
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacagagggagtacta 111
||||||||||||||||||||||||
Sbjct: 25 tattttgggacagagggagtacta 2
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
>RF01058;MIR806;AAAA02020164.1/6230-6473 39946:Oryza sativa Indica
Group
Length = 244
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgacgcag 41
||||||||||||||||||||| ||||||||
Sbjct: 243 tactccctccgtcccaaaatatttgacgcag 213
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 237 gtactccctccgtcccaaaataa 215
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 239 tactccctccgtcccaaaataag 217
>RF00906;MIR1122;ABXC01004408.1/208298-208202 4558:Sorghum bicolor
(sorghum)
Length = 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 gacacttattttgggacagagggagta 108
|||||| ||||||||||||||||||||
Sbjct: 31 gacactcattttgggacagagggagta 5
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 ctccctccgtcccaaaataagtg 35
|||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtg 29
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 7 cttgtactccctccgtcccaaaataagtgac 37
||||||||| ||| |||||||||||||||||
Sbjct: 101 cttgtactcgctctgtcccaaaataagtgac 71
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 84 cacttattttgggacagagggagtac 109
||||||||||||||||||| ||||||
Sbjct: 73 cacttattttgggacagagcgagtac 98
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 ctccctccgtcccaaaataagtg 35
|||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgacgcagattt 45
|||||||||||| |||||||||||| | |||||||
Sbjct: 130 tactccctccgttccaaaataagtgtctcagattt 96
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 ttgtactccctccgtcccaaaat 30
|||||||||||||||||||||||
Sbjct: 2 ttgtactccctccgtcccaaaat 24
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaataa 26
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 82 gacacttattttgggacagagggagtactat 112
|||| ||||||||| ||||||||||||||||
Sbjct: 31 gacagttattttggaacagagggagtactat 1
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 116 gtactccctccgtcccaaaataa 94
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaataa 26
>RF00906;MIR1122;EF059989.1/24895-24770 29664:Brachypodium
sylvaticum
Length = 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgac 37
|||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtcccaaattaagtgac 31
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 110 gtactccctccgtcccaaaataa 88
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 ttattttgggacagagggagtactat 112
|||||||||||| |||||||||||||
Sbjct: 26 ttattttgggacggagggagtactat 1
>RF00906;MIR1122;AAAA02005900.1/34221-34065 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacagagggagtact 110
|||||||||||||||||||||||
Sbjct: 25 tattttgggacagagggagtact 3
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tgtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 120 tgtactccctccgtcccaaaata 98
>RF00906;MIR1122;AAAA02012151.1/19064-18908 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tgtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 155 tgtactccctccgtcccaaaata 133
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa Indica
Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tgtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 154 tgtactccctccgtcccaaaata 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacagagggagtac 109
||||||||||||||||||||||
Sbjct: 25 tattttgggacagagggagtac 4
>RF00906;MIR1122;AACV01003177.1/25234-25117 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 94 gtactccctccgtcccaaaataa 72
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tgtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 110 tgtactccctccgtcccaaaata 88
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP008207.1/24395058-24395107 39947:Oryza sativa
Japonica Group
Length = 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacagagggagtact 110
|||||||||||||||||||||||
Sbjct: 25 tattttgggacagagggagtact 3
>RF00906;MIR1122;AP004891.4/64233-64389 39947:Oryza sativa Japonica
Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacagagggagtact 110
|||||||||||||||||||||||
Sbjct: 25 tattttgggacagagggagtact 3
>RF01058;MIR806;AACV01007528.1/40785-40545 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||||||||||||| ||||||||||
Sbjct: 241 gtactccctccgtcctaaaataagtg 216
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 149 tactccctccgtcccaaaataa 128
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgtactccctccgtcccaaaat 30
||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtcccaaaat 24
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 tgtactccctccgtcccaaaat 30
||||||||||||||||||||||
Sbjct: 134 tgtactccctccgtcccaaaat 113
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataa 80
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataa 80
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 82 gacacttattttgggacagagggagtacta 111
||||||||||||| ||| ||||||||||||
Sbjct: 31 gacacttattttgagacggagggagtacta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaataagtg 35
|||||||||||||| |||||||||||
Sbjct: 4 gtactccctccgtctcaaaataagtg 29
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataa 80
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 67 ttgtactagatcaacgacacttattttgggacagagggagta 108
|||||||| ||||| |||| |||||||||||| ||||||||
Sbjct: 46 ttgtactaaatcaaagacaattattttgggacgtagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 67 ttgtactagatcaacgacacttattttgggacagagggagta 108
|||||||| | ||| |||||||||||||||| |||||||||
Sbjct: 60 ttgtactaaagcaaagacacttattttgggatggagggagta 101
>RF00906;MIR1122;EU730902.1/34504-34625 15368:Brachypodium
distachyon
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 ctccctccgtcccaaaataagtgacg 38
||||||||||||| ||||||||||||
Sbjct: 7 ctccctccgtcccgaaataagtgacg 32
>RF00906;MIR1122;EU730899.1/86003-86096 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 ccctccgtcccaaaataagtga 36
||||||||||||||||||||||
Sbjct: 86 ccctccgtcccaaaataagtga 65
>RF00906;MIR1122;AAAA02002553.1/2264-2375 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 109 gtactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02031697.1/13340-13228 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 110 gtactccctccgtcccaaaata 89
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 132 tactccctccgtcccaaaataa 111
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 156 tactccctccgtcccaaaataa 135
>RF00906;MIR1122;AP003725.3/107083-106927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 132 gtactccctccgtcccaaaata 111
>RF00906;MIR1122;AAAA02033081.1/3802-3711 39946:Oryza sativa
Indica Group
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02027128.1/44166-44066 39946:Oryza sativa
Indica Group
Length = 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacagagggagtac 109
||||||||||||||||||||||
Sbjct: 77 tattttgggacagagggagtac 98
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 118 tactccctccgtcccaaaataa 97
>RF00906;MIR1122;AC090873.4/89374-89493 4530:Oryza sativa (rice)
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 110 gtactccctccgtcccaaaata 89
>RF00906;MIR1122;AC020666.8/128854-128945 39947:Oryza sativa
Japonica Group
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacagagggagtac 109
||||||||||||||||||||||
Sbjct: 25 tattttgggacagagggagtac 4
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 99 tactccctccgtcccaaaataa 78
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacagagggagta 108
||||||||||||||||||||||
Sbjct: 96 ttattttgggacagagggagta 117
>RF00906;MIR1122;AAAA02006623.1/10234-10353 39946:Oryza sativa
Indica Group
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 117 gtactccctccgtcccaaaata 96
>RF00906;MIR1122;AP005586.3/39119-39252 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 131 gtactccctccgtcccaaaata 110
>RF00906;MIR1122;AAAA02021906.1/16695-16573 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacagagggagta 108
||||||||||||||||||||||
Sbjct: 98 ttattttgggacagagggagta 119
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccaaaataa 92
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacagagggagtac 109
||||||||||||||||||||||
Sbjct: 25 tattttgggacagagggagtac 4
>RF00906;MIR1122;CT832702.1/1285-1384 39946:Oryza sativa Indica
Group
Length = 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 97 gtactccctccgtcccaaaata 76
>RF00906;MIR1122;AP003267.3/20551-20679 39947:Oryza sativa Japonica
Group
Length = 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 126 gtactccctccgtcccaaaata 105
>RF00906;MIR1122;AAAA02015207.1/7418-7517 39946:Oryza sativa
Indica Group
Length = 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP005313.3/33733-33833 39947:Oryza sativa Japonica
Group
Length = 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacagagggagtac 109
||||||||||||||||||||||
Sbjct: 77 tattttgggacagagggagtac 98
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02016947.1/4733-4836 39946:Oryza sativa
Indica Group
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaata 25
>RF00906;MIR1122;AP004994.2/80471-80627 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 154 gtactccctccgtcccaaaata 133
>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 152 gtactccctccgtcccaaaata 131
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
>RF00906;MIR1122;AK108711.1/3-158 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaataagtg 35
|||||||||||||||||| |||||||
Sbjct: 4 gtactccctccgtcccaatataagtg 29
>RF00906;MIR1122;AP008210.1/24813715-24813809 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 92 gtactccctccgtcccaaaata 71
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 125 tactccctccgtcccaaaataa 104
>RF00906;MIR1122;AAAA02007860.1/10023-9886 39946:Oryza sativa Indica
Group
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 cttgtactccctccgtcccaaaataa 32
|||||| |||||||||||||||||||
Sbjct: 138 cttgtattccctccgtcccaaaataa 113
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaata 25
>RF00906;MIR1122;AC120987.2/63054-63157 39947:Oryza sativa Japonica
Group
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 101 gtactccctccgtcccaaaata 80
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 137 gtactccctccgtcccaaaata 116
