miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 147 bits (74), Expect = 4e-35
Identities = 95/102 (93%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgt 69
||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||
Sbjct: 102 gtactccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaattgt 43
Query: 70 actaagcttgagtcacttattttggaacggagggagtataat 111
|||| ||| || |||||||||||||||||||||||||||||
Sbjct: 42 actacgctcaagacacttattttggaacggagggagtataat 1
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtc 31
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 147 bits (74), Expect = 4e-35
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtctcaaatttgtactagctctagtacaaagttgta 64
Query: 71 ctaagcttgagtcacttattttggaacggagggagtat 108
||||||||||| | |||||||||||||||||||||||
Sbjct: 65 ctaagcttgagatagttattttggaacggagggagtat 102
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 77 ttgagtcacttattttggaacggagggagtataa 110
||||| ||||||||||||||||||||||||||||
Sbjct: 35 ttgagacacttattttggaacggagggagtataa 2
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 145 bits (73), Expect = 1e-34
Identities = 94/101 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||||||||||||||||||| |||| |||||||||| || || |||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaagttgta 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagtataat 111
||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagtataat 1
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 137 bits (69), Expect = 4e-32
Identities = 90/97 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaactttgtactagctgtagtacaaaattaca 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagta 107
||||||||||| |||||||||||| ||||||||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 77 ttgagtcacttattttggaacggagggagtata 109
||||| |||||||||||| ||||||||||||||
Sbjct: 71 ttgagacacttattttgggacggagggagtata 103
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 137 bits (69), Expect = 4e-32
Identities = 93/101 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||||||||||||||||||| |||| |||||||||| || || |||||||| ||||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaggttgta 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagtataat 111
||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagtataat 1
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 131 bits (66), Expect = 2e-30
Identities = 90/98 (91%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgt 69
|||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||
Sbjct: 102 gtactccctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaagttgt 43
Query: 70 actaagcttgagtcacttattttggaacggagggagta 107
|||| ||||||| ||||||||||| ||||||||||||
Sbjct: 42 actaggcttgagacacttattttgagacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaataagtgtc 37
|||||||||||||| |||||||||||||
Sbjct: 4 gtactccctccgtctcaaaataagtgtc 31
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 9 agtactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttg 68
|||||||| |||||||||||||||||||| ||| ||| |||| ||||||||||||||||
Sbjct: 3 agtactccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagttg 62
Query: 69 tactaagcttgagtcacttattttggaacggagggagtata 109
||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 63 tactaaggttgagacacttattttgggacggagggagtata 103
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaac 42
||||||||||||||||||||||||||| ||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaac 70
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 127 bits (64), Expect = 3e-29
Identities = 92/100 (92%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
||||||||||||||||||||||||||| || |||||||||| |||||||| ||| |||||
Sbjct: 100 tactccctccgtcccaaaataagtgtctca-ctttgtactaactctagtataaaattgta 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagtataa 110
||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 41 ctaaggttgagacacttattttgggacggagggagtataa 2
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtcacaac 42
||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaac 36
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 tgagtcacttattttggaacggagggagtat 108
|||| |||||||||||| |||||||||||||
Sbjct: 71 tgagacacttattttgggacggagggagtat 101
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 125 bits (63), Expect = 1e-28
Identities = 90/99 (90%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgt 69
||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| || |
Sbjct: 102 gtactccctccatcccaaaataagtgtctcaactttgtactatctctagtacaaattttt 43
Query: 70 actaagcttgagtcacttattttggaacggagggagtat 108
|||||||| || |||||||||||| |||||||||||||
Sbjct: 42 actaagctcaagacacttattttgggacggagggagtat 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 123 bits (62), Expect = 5e-28
Identities = 90/98 (91%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 100 tactccctcc-tcccaaaataagtgtctcaactttgtactagttctagtacaaagttgta 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagtat 108
||| ||||||| || ||||||||| |||||| ||||||
Sbjct: 41 ctaggcttgagacagttattttgggacggagtgagtat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 38 acaactttgtactagctctagtacaaagttg 68
||||||||||||||| ||||||||||||||
Sbjct: 43 acaactttgtactagaactagtacaaagttg 73
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 123 bits (62), Expect = 5e-28
Identities = 93/102 (91%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 7 gtagtactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagt 66
|||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 104 gtagtactccctccatcccaaaataactgtctcaactttgtactagctctagtacaaagt 45
Query: 67 tgtactaagcttgagtcacttattttggaacggagggagtat 108
||||| ||| ||||| || |||||||| |||||||||||||
Sbjct: 44 tgtacaaag-ttgagacagttattttgagacggagggagtat 4
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtac 49
||||||||||||| |||||||| |||| |||||||||||
Sbjct: 5 tactccctccgtctcaaaataactgtctcaactttgtac 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 38 acaactttgtactagctctagtacaaagttg 68
||||||||||||||| ||||||||||||||
Sbjct: 42 acaactttgtactagagctagtacaaagttg 72
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 117 bits (59), Expect = 3e-26
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
||||||||||||| |||||||| |||| |||||||||| |||||||||||||||||||||
Sbjct: 101 tactccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagttgta 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagtata 109
|||||||| || |||||||||| | || |||||| ||||
Sbjct: 41 ctaagcttaagacacttattttaggaccgagggaatata 3
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 117 bits (59), Expect = 3e-26
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
||||||||| | |||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 101 tactccctctcttccaaaataagtgtctcaactttgtactagctctactacaaagttgta 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagtata 109
||||||||||| || |||||||| | ||||||||||||
Sbjct: 41 ctaagcttgagacagttattttgagatggagggagtata 3
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgt 69
||||| ||||||||||||||||| |||| |||||||||| ||| | ||||||||| ||||
Sbjct: 102 gtacttcctccgtcccaaaataactgtctcaactttgtattagatttagtacaaaattgt 43
Query: 70 actaagcttgagtcacttattttggaacggagggagta 107
| ||||||| || |||||||||||||||||||||||||
Sbjct: 42 attaagcttaagacacttattttggaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtc 31
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtttcaaaataaatgtctcaactttgtactagctctagtacaaagttgta 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagtat 108
|||||| ||| || |||||||| || |||||||||||
Sbjct: 41 ctaagcatgaaacaattattttgaaatggagggagtat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 38 acaactttgtactagctctagtacaaagttg 68
||||||||||||||| ||||||||||||||
Sbjct: 43 acaactttgtactagagctagtacaaagttg 73
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 113 bits (57), Expect = 5e-25
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||| |||||||||||||||||||| ||||||| |||||||| ||||||||| |||||
Sbjct: 5 tactccatccgtcccaaaataagtgtctcaactttatactagctatagtacaaacttgta 64
Query: 71 ctaagcttgagtcacttattttggaacggagggagta 107
|||| ||||| || ||||||||| ||||||||||||
Sbjct: 65 ttaagtttgagacagttattttgggacggagggagta 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgtc 37
||||||||||||||||||||||| ||||
Sbjct: 102 gtactccctccgtcccaaaataactgtc 75
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 13 ctccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgtact 72
||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttgtactagctttaatacaaagttgtact 66
Query: 73 aagcttgagtcacttattttg 93
| ||||| |||||||||||
Sbjct: 67 agagttgagacacttattttg 87
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
||||||||| ||| |||||||| |||| |||| ||||||||||||||||||||| |||||
Sbjct: 101 tactccctctgtctcaaaataactgtctcaacattgtactagctctagtacaaaattgta 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagta 107
||||| || || ||||||||||| ||||||||||||
Sbjct: 41 ctaagattaagacacttattttgagacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 gtagtactccctccgtcccaaaataagtgtc 37
||||||||||||||||| |||||||||||||
Sbjct: 1 gtagtactccctccgtctcaaaataagtgtc 31
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
||||||||||||| |||||||||| || ||||||| ||||||||||||| |||||||||
Sbjct: 101 tactccctccgtctcaaaataagtatctcaactttacactagctctagtataaagttgta 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagta 107
||||| ||||| | ||||||||| ||||||||||||
Sbjct: 41 ctaagtttgagaaagttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 agtactccctccgtcccaaaataa 32
||||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaataa 26
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||||||||||||||||||| |||| ||||||| |||||| ||||||| ||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctagtataaatttata 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagta 107
|||||||| || || ||||||||| ||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataactgtc 31
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 103 bits (52), Expect = 5e-22
Identities = 88/100 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||||||||||||||||||| |||| |||||||| |||||||||||| ||| || ||
Sbjct: 101 tactccctccgtcccaaaataattgtcttaactttgttctagctctagtataaaattata 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagtataa 110
|||||||| || |||||||||| ||||||| ||||||||
Sbjct: 41 ctaagcttaagacacttattttaaaacggagagagtataa 2
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 103 bits (52), Expect = 5e-22
Identities = 88/100 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
||||||||||||||||||||| |||| |||||||||||||||| ||| ||| |||||
Sbjct: 101 tactccctccgtcccaaaatatctgtcttaactttgtactagctcatgtataaaattgta 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagtataa 110
|||||||| || |||||||||||| |||||||| ||||||
Sbjct: 41 ctaagcttaagacacttattttgggacggagggggtataa 2
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 ccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||||
Sbjct: 9 ccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||||||| |||||||||||||||| ||||||||||||| || |||||||||||||||
Sbjct: 108 tactccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagttgta 49
Query: 71 ctaagct 77
|||||||
Sbjct: 48 ctaagct 42
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
||||||||||||| |||||||||| || || |||| ||||||||||||| |||||||||
Sbjct: 101 tactccctccgtctcaaaataagtatctcagctttacactagctctagtataaagttgta 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagta 107
||||| ||||| | ||||||||| ||||||||||||
Sbjct: 41 ctaagtttgagaaagttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 agtactccctccgtcccaaaataa 32
||||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaataa 26
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||||||||||||||||||| |||| ||||||| |||||| |||| || ||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctaatataaatttata 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagta 107
|||||||| || || ||||||||| ||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataactgtc 31
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 93.7 bits (47), Expect = 5e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||||||||||||||||||| |||| ||| ||||||||| || |||||||||||||||
Sbjct: 149 tactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagttgta 90
Query: 71 ctaagcttgag 81
||||| |||||
Sbjct: 89 ctaaggttgag 79
Score = 69.9 bits (35), Expect = 7e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 39 caactttgtactagctctagtacaaagttgtactaagcttgagtcacttattttggaacg 98
||||||||||||| | |||| ||||||||||||||| ||||| |||||||||||| |||
Sbjct: 73 caactttgtactaaatttagtgcaaagttgtactaaggttgagacacttattttgggacg 14
Query: 99 gagggag 105
||||||
Sbjct: 13 aagggag 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 8 tagtactccctccgtcccaaaataagtgtcacaac 42
|||| |||||| |||||||||||||||||| ||||
Sbjct: 2 tagttctcccttcgtcccaaaataagtgtctcaac 36
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 76 cttgagtcacttattttggaacggagggagtataa 110
|||||| || ||||||||| |||||||||||||||
Sbjct: 118 cttgagacagttattttgggacggagggagtataa 152
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 93.7 bits (47), Expect = 5e-19
Identities = 86/99 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
|||||||||| ||||||||||||||| || |||||| ||||| ||||| |||||| ||
Sbjct: 101 tactccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagttata 42
Query: 71 ctaagcttgagtcacttattttggaacggagggagtata 109
||||| ||||| |||||||||| ||||||| ||||||||
Sbjct: 41 ctaagattgagacacttattttagaacggaaggagtata 3
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 81.8 bits (41), Expect = 2e-15
Identities = 91/104 (87%), Gaps = 4/104 (3%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg--tcacaactttgtactagctctagtacaaagtt- 67
||||||||||||||||||||||||| || ||||||| ||||| | ||||||||| ||
Sbjct: 5 tactccctccgtcccaaaataagtggatctcaactttatactatttttagtacaaaatta 64
Query: 68 gtactaagcttgagtcacttattttggaacggagggagtataat 111
|||| ||| ||||||||||||||| || ||||||||||||||||
Sbjct: 65 gtacaaag-ttgagtcacttatttcgggacggagggagtataat 107
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtacta 51
||||||||||||||| ||||||||| | |||||||||||||
Sbjct: 103 tactccctccgtcccgaaataagtgactcaactttgtacta 63
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 83 cacttattttggaacggagggagtata 109
|||||||||||| ||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtata 3
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 81.8 bits (41), Expect = 2e-15
Identities = 84/97 (86%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
||||||||||||| |||||||||| || || ||| |||||||| |||| ||||||| ||
Sbjct: 5 tactccctccgtctcaaaataagtttcttaattttatactagct-tagtgcaaagttata 63
Query: 71 ctaagcttgagtcacttattttggaacggagggagta 107
||||||||||| || |||||||| ||||||||||||
Sbjct: 64 ctaagcttgagacaattattttgagacggagggagta 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 8 tagtactccctccgtcccaaaataagtgtc 37
|||||||||||||||| |||||||| ||||
Sbjct: 103 tagtactccctccgtctcaaaataattgtc 74
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 79.8 bits (40), Expect = 7e-15
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttgta 70
||||||||||||| ||||||| ||||| ||||||| |||||||||||| |||||||||
Sbjct: 5 tactccctccgtctcaaaataggtgtctcaactttaccctagctctagtataaagttgta 64
Query: 71 ctaagcttgagtcacttattttgg 94
||||| ||||| | |||||||||
Sbjct: 65 ctaagtttgagaaagttattttgg 88
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 9 agtactccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||||| ||||
Sbjct: 117 agtactccctccgtcccaaaataactgtc 89
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 8 tagtactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagtt 67
|||||||||||| || ||||||||| |||| ||||||||||||||| || || ||| ||
Sbjct: 2 tagtactccctctgttccaaaataactgtcttaactttgtactagctttactataaattt 61
Query: 68 gtactaagcttgagtcacttattttggaacggagggagta 107
||||||| || || || |||||||| ||||||||||||
Sbjct: 62 atactaagtttaagacatttattttgcgacggagggagta 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 8 tagtactccctccgtcccaaaataagtgtc 37
|||||||||||||||| |||||||| ||||
Sbjct: 104 tagtactccctccgtcgcaaaataaatgtc 75
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 9 agtactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttg 68
|||||||||||||||||||| |||||| | ||||||| ||||| || |||||||||||||
Sbjct: 92 agtactccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagttg 33
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtacta 51
||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 5 tactccctctgtcccaaaataagtgactcaactttgtacta 45
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 77 ttgagtcacttattttggaacggagggagta 107
|||||||||||| ||||| ||||||||||||
Sbjct: 60 ttgagtcacttaatttgggacggagggagta 90
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 84/98 (85%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagtt-gt 69
|||||||||||| | |||||| || | ||||||||||||| || ||||||||| || ||
Sbjct: 101 tactccctccgttctaaaatagatgactcaactttgtactaactatagtacaaaattagt 42
Query: 70 actaagcttgagtcacttattttggaacggagggagta 107
|| ||| |||||||| |||||||||||||||||||||
Sbjct: 41 acaaag-ttgagtcatctattttggaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 9 agtactccctccgtcccaaaataagtgtcacaactttgtacta 51
|||||||||||||| |||||||| || | |||||||||||||
Sbjct: 3 agtactccctccgttccaaaatagatgactcaactttgtacta 45
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtacta 51
||||||||||||||||||||||||| | |||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgactcaactttgtacta 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 77 ttgagtcacttattttggaacggagggagtataat 111
|||||||||||||||||| ||||||||||||||||
Sbjct: 70 ttgagtcacttattttgggacggagggagtataat 104
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtacta 51
||||||||||||||||||||||||| | |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgactcaactttgtacta 45
Score = 60.0 bits (30), Expect = 7e-09
Identities = 50/54 (92%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 56 tagtacaaagtt-gtactaagcttgagtcacttattttggaacggagggagtat 108
|||||||||||| |||| ||| |||||||||||||||||| |||||||||||||
Sbjct: 56 tagtacaaagttagtacaaag-ttgagtcacttattttgggacggagggagtat 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgtcacaactttgtacta 51
|||||| |||| |||||||||||||| | |||||||||||||
Sbjct: 129 gtactcgctccatcccaaaataagtgactcaactttgtacta 88
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 56 tagtacaaagttgtactaagcttgagtcacttattttggaacggagggag 105
|||||||||||| |||||| ||||| |||||||||||| ||||||||||
Sbjct: 56 tagtacaaagttatactaaagttgagacacttattttgggacggagggag 7
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 13 ctccctccgtcccaaaataagtgtcacaacttt 45
||||||||||||||||||||||||| |||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaacttt 39
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtac 49
|||| |||||||||||||||||||||| |||||| ||||
Sbjct: 89 tacttcctccgtcccaaaataagtgtctcaacttagtac 51
Score = 48.1 bits (24), Expect = 3e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 66 ttgtactaagcttgagtcacttattttggaacggagggagtata 109
|||||||||| ||||| |||||||||||| ||||||| ||||||
Sbjct: 49 ttgtactaag-ttgagacacttattttgggacggaggaagtata 91
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 77 ttgagtcacttattttggaacggagggagtataa 110
|||||||||||||||||| |||||||||||||||
Sbjct: 82 ttgagtcacttattttgggacggagggagtataa 115
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 77 ttgagtcacttattttggaacggagggagtata 109
|||||||||||||||||| || |||||||||||
Sbjct: 35 ttgagtcacttattttgggacagagggagtata 3
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 112 tactccctccgtcccaaaataagtg 88
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 60.0 bits (30), Expect = 7e-09
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtc-acaactttgtacta 51
||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctccaactttgtacta 46
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 8 tagtactccctccgtcccaaaataagtg 35
||||||||||||||||||||||||||||
Sbjct: 114 tagtactccctccgtcccaaaataagtg 87
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 agtcacttattttggaacggagggagta 107
||||||||||||||| ||||||||||||
Sbjct: 84 agtcacttattttgggacggagggagta 111
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 tgagtcacttattttggaacggagggagtat 108
|||| ||||||||||||||||||||||||||
Sbjct: 101 tgagacacttattttggaacggagggagtat 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||| ||||||||||||||
Sbjct: 130 tactccctccgttccaaaataagtgtc 104
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 77 ttgagtcacttattttggaacggagggagta 107
|||||||||||||||||| ||||||||||||
Sbjct: 81 ttgagtcacttattttgggacggagggagta 111
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||||||||||||||||||||||||
Sbjct: 112 gtactccctccgtcccaaaataagtg 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 77 ttgagtcacttattttggaacggagggagtataa 110
|||||||||||||||||| || |||||| |||||
Sbjct: 35 ttgagtcacttattttgggacagagggattataa 2
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaa 41
||||||||| |||||||||||||||||||||
Sbjct: 102 tactccctctgtcccaaaataagtgtcacaa 72
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||||||||||||||||
Sbjct: 102 tactccctccgtcccaaaataagtgtc 76
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 83 cacttattttggaacggagggagtataat 111
|||||||||||| ||||||||||||||||
Sbjct: 78 cacttattttgggacggagggagtataat 106
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
Japonica Group
Length = 246
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||||||||||||||||||||||||
Sbjct: 1 gtactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||| ||||||||||||||||||||
Sbjct: 246 gtactacctccgtcccaaaataagtg 221
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgt 36
||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtgt 27
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgtcacaactttgtacta 51
|||||| ||| ||||||||||||||| | |||||||||||||
Sbjct: 98 gtactcgctctgtcccaaaataagtgactcaactttgtacta 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 17 ctccgtcccaaaataagtgtcacaactttgtacta 51
|||||||||||| |||||| | |||||||||||||
Sbjct: 11 ctccgtcccaaagtaagtgactcaactttgtacta 45
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttg 68
|||||||||| | |||||||| || | ||||||||||||| || |||||||||||||
Sbjct: 90 tactccctccattccaaaatagatgactcaactttgtactaactttagtacaaagttg 33
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgta 48
|||||||||||||||||| |||||| | ||||||||||
Sbjct: 5 tactccctccgtcccaaattaagtgactcaactttgta 42
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 8 tagtactccctccgtcccaaaataagtg 35
||||||||||||||||||||| ||||||
Sbjct: 116 tagtactccctccgtcccaaattaagtg 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 77 ttgagtcacttattttggaacggagggagta 107
|||||||||||| ||||| ||||||||||||
Sbjct: 35 ttgagtcacttaatttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 77 ttgagtcacttattttggaacggagggagta 107
|||||||||||| ||||| ||||||||||||
Sbjct: 83 ttgagtcacttaatttgggacggagggagta 113
>RF00906;MIR1122;EU730897.1/72285-72181 15368:Brachypodium
distachyon
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 64 agttgtactaagcttgagtcacttattttggaacggagggagtata 109
|||||||||||| |||| |||||||| |||| |||||||||||||
Sbjct: 58 agttgtactaagtctgagacacttattatggatcggagggagtata 103
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 244 tactccctccgtcccaaaataagtg 220
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 cacttattttggaacggagggagtat 108
|||||||||||| |||||||||||||
Sbjct: 220 cacttattttgggacggagggagtat 245
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 245 tactccctccgtcccaaaataagtg 221
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 83 cacttattttggaacggagggagtat 108
|||||||||||| |||||||||||||
Sbjct: 26 cacttattttgggacggagggagtat 1
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 83 cacttattttggaacggagggagtat 108
|||||||||||| |||||||||||||
Sbjct: 26 cacttattttgggacggagggagtat 1
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||| ||||||||||||||||||||
Sbjct: 243 gtactacctccgtcccaaaataagtg 218
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||| ||||||||||||||||||||
Sbjct: 245 gtactacctccgtcccaaaataagtg 220
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 cacttattttggaacggagggagtat 108
|||||||||||| |||||||||||||
Sbjct: 216 cacttattttgggacggagggagtat 241
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 83 cacttattttggaacggagggagtata 109
|||||||||||| ||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtata 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 agtactccctccgtcccaaaataagtg 35
||||||||||| |||||||||||||||
Sbjct: 66 agtactccctctgtcccaaaataagtg 40
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 tccctccgtcccaaaataagtgtca 38
|||||||||||||||||||||||||
Sbjct: 8 tccctccgtcccaaaataagtgtca 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
||||||| |||||||||||||||||||
Sbjct: 101 tactcccgccgtcccaaaataagtgtc 75
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 tagtactccctccgtcccaaaataa 32
|||||||||||||||||||||||||
Sbjct: 2 tagtactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtg 35
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 83 cacttattttggaacggagggagtat 108
|||||||||||| |||||||||||||
Sbjct: 29 cacttattttgggacggagggagtat 4
>RF00906;MIR1122;AP008213.1/28683389-28683301 39947:Oryza sativa
Japonica Group
Length = 89
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 83 cacttattttggaacggagggagta 107
|||||||||||||||||||||||||
Sbjct: 61 cacttattttggaacggagggagta 85
>RF00906;MIR1122;DQ154924.1/3536-3603 4571:Triticum turgidum
Length = 68
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tattttggaacggagggagtataa 110
||||||||||||||||||||||||
Sbjct: 44 tattttggaacggagggagtataa 67
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 77 ttgagtcacttattttggaacggagggagtat 108
|||||||| ||||||||||||||||||||||
Sbjct: 35 ttgagtcatctattttggaacggagggagtat 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtcacaactttgtactagctctagtacaaagttg 68
|||||||||||| |||||||| || | ||||||||||||| || |||| |||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtactaactttagtgtaaagttg 62
>RF00906;MIR1122;AY137517.1/5819-5912 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 94
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 7 gtagtactccctccgtcccaaaataagtgtca 38
||||||||||||||| |||||||||||||||
Sbjct: 94 gtagtactccctccgatccaaaataagtgtca 63
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 88 attttggaacggagggagtataat 111
||||||||||||||||||||||||
Sbjct: 24 attttggaacggagggagtataat 1
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtgtc 37
|||||||||| |||||||||||||||||
Sbjct: 103 gtactccctcggtcccaaaataagtgtc 76
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagt 34
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataag 33
||||||||||||||||||||||||
Sbjct: 94 gtactccctccgtcccaaaataag 71
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataag 27
>RF00906;MIR1122;AP003267.3/20551-20679 39947:Oryza sativa Japonica
Group
Length = 129
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 tagtactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 128 tagtactccctccgtcccaaaata 105
>RF00906;MIR1122;AK108711.1/3-158 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 tagtactccctccgtcccaaaataagtg 35
|||||||||||||||||||| |||||||
Sbjct: 2 tagtactccctccgtcccaatataagtg 29
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 tagtactccctccgtcccaaaata 31
||||||||||||||||||||||||
Sbjct: 2 tagtactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 agtactccctccgtcccaaaataa 32
||||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaataa 26
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 237 gtactccctccgtcccaaaataa 215
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataag 33
|||||||||||||||||||||||
Sbjct: 239 tactccctccgtcccaaaataag 217
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tattttggaacggagggagtata 109
|||||||||||||||||||||||
Sbjct: 98 tattttggaacggagggagtata 120
>RF00906;MIR1122;U76215.1/3218-3297 4565:Triticum aestivum (bread
wheat)
Length = 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 77 ttgagtcacttattttggaacggagggagta 107
|||||||| |||||||||||||||||||||
Sbjct: 35 ttgagtcatctattttggaacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 77 ttgagtcacttattttggaacggagggagt 106
|||||||| ||||||||||||||||||||
Sbjct: 46 ttgagtcatctattttggaacggagggagt 75
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
||||||| |||||||||||||||||||
Sbjct: 82 tactcccaccgtcccaaaataagtgtc 56
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 83 cacttattttggaacggagggagtata 109
|||||||||||||||||| ||||||||
Sbjct: 29 cacttattttggaacggaaggagtata 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||| ||||||||||||||||||||||
Sbjct: 106 tactacctccgtcccaaaataagtgtc 80
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 77 ttgagtcacttattttggaacggagggagta 107
|||||||| |||||||||||||||||||||
Sbjct: 35 ttgagtcatctattttggaacggagggagta 5
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||||||| ||||||||||||
Sbjct: 102 tactccctccgtcctaaaataagtgtc 76
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tattttggaacggagggagtata 109
|||||||||||||||||||||||
Sbjct: 143 tattttggaacggagggagtata 165
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 tagtactccctccgtcccaaaat 30
|||||||||||||||||||||||
Sbjct: 2 tagtactccctccgtcccaaaat 24
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataagtgtcacaa 41
||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtcttaaaataagtgtcacaa 35
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 8 tagtactccctccgtcccaaaataagtgtc 37
||||||| ||| ||||||||||||||||||
Sbjct: 105 tagtacttccttcgtcccaaaataagtgtc 76
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataagtgtc 37
|||||||||| ||||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtc 75
>RF00906;MIR1122;AY821690.1/1219-1313 4485:Aegilops comosa
Length = 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 85 cttattttggaacggagggagtataat 111
||||||||||| |||||||||||||||
Sbjct: 27 cttattttggatcggagggagtataat 1
>RF00906;MIR1122;AAAA02002553.1/2264-2375 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 110 agtactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 110 gtactccctccgtcccaaaataa 88
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 133 agtactccctccgtcccaaaata 111
>RF00906;MIR1122;AAAA02033081.1/3802-3711 39946:Oryza sativa
Indica Group
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaata 25
>RF00906;MIR1122;AC090873.4/89374-89493 4530:Oryza sativa (rice)
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 111 agtactccctccgtcccaaaata 89
>RF00906;MIR1122;AAAA02006623.1/10234-10353 39946:Oryza sativa
Indica Group
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 118 agtactccctccgtcccaaaata 96
>RF00906;MIR1122;CT832702.1/1285-1384 39946:Oryza sativa Indica
Group
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 98 agtactccctccgtcccaaaata 76
>RF00906;MIR1122;AAAA02015207.1/7418-7517 39946:Oryza sativa
Indica Group
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02016947.1/4733-4836 39946:Oryza sativa
Indica Group
Length = 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 3 agtactccctccgtcccaaaata 25
>RF00906;MIR1122;AP004994.2/80471-80627 39947:Oryza sativa Japonica
Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 155 agtactccctccgtcccaaaata 133
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataa 32
|||||||||||||||||||||||
Sbjct: 94 gtactccctccgtcccaaaataa 72
>RF00906;MIR1122;AC120987.2/63054-63157 39947:Oryza sativa Japonica
Group
Length = 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 agtactccctccgtcccaaaata 31
|||||||||||||||||||||||
Sbjct: 102 agtactccctccgtcccaaaata 80
>RF01058;MIR806;AACV01007528.1/40785-40545 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaataagtg 35
||||||||||||||| ||||||||||
Sbjct: 241 gtactccctccgtcctaaaataagtg 216
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 tattttggaacggagggagtat 108
||||||||||||||||||||||
Sbjct: 133 tattttggaacggagggagtat 154
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 tattttggaacggagggagtat 108
||||||||||||||||||||||
Sbjct: 131 tattttggaacggagggagtat 152
>RF00906;MIR1122;FJ752586.1/56000-56102 161934:Beta vulgaris
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 tcacttattttggaacggagggagta 107
||||||||||||||||||||| ||||
Sbjct: 74 tcacttattttggaacggaggaagta 99
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 39 caactttgtactagctctagtacaaagttg 68
||||||||||||| || |||||||||||||
Sbjct: 62 caactttgtactatctttagtacaaagttg 33
>RF00906;MIR1122;EU660899.1/111846-111744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 tattttggaacggagggagtat 108
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;CR626933.1/11895-11804 4571:Triticum turgidum
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 cctccgtcccaaaataagtgtc 37
||||||||||||||||||||||
Sbjct: 85 cctccgtcccaaaataagtgtc 64
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 39 caactttgtactagctctagtacaaagttg 68
||||||||||||| || |||||||||||||
Sbjct: 62 caactttgtactaactttagtacaaagttg 33
>RF00906;MIR1122;EU862571.1/695-592 98113:Hordeum murinum subsp.
glaucum
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 tagtactccctccgtcccaaaa 29
||||||||||||||||||||||
Sbjct: 103 tagtactccctccgtcccaaaa 82
>RF00906;MIR1122;EU379326.1/1838-1972 269377:Poa palustris
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 90 tttggaacggagggagtataat 111
||||||||||||||||||||||
Sbjct: 22 tttggaacggagggagtataat 1
>RF00906;MIR1122;EU730898.1/15478-15583 15368:Brachypodium
distachyon
Length = 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 78 tgagtcacttattttggaacggagggagtataat 111
|||| |||||||| |||| |||||||||||||||
Sbjct: 73 tgagacacttattatggatcggagggagtataat 106
>RF00906;MIR1122;AAAA02034559.1/3133-3272 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 tattttggaacggagggagtat 108
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;AAAA02031697.1/13340-13228 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 110 gtactccctccgtcccaaaata 89
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 132 tactccctccgtcccaaaataa 111
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 156 tactccctccgtcccaaaataa 135
>RF00906;MIR1122;AP003725.3/107083-106927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 118 tactccctccgtcccaaaataa 97
>RF00906;MIR1122;AAAA02013497.1/8427-8281 39946:Oryza sativa Indica
Group
Length = 147
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 tagtactccctccgtcccaaaa 29
||||||||||||||||||||||
Sbjct: 146 tagtactccctccgtcccaaaa 125
>RF00906;MIR1122;AACV01025370.1/11561-11672 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 tagtactccctccgtcccaaaa 29
||||||||||||||||||||||
Sbjct: 2 tagtactccctccgtcccaaaa 23
>RF00906;MIR1122;AACV01008275.1/11041-11180 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 tattttggaacggagggagtat 108
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;AACV01021306.1/37655-37776 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 119 gtactccctccgtcccaaaata 98
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 119 gtactccctccgtcccaaaata 98
>RF00906;MIR1122;AAAA02006215.1/494-605 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 109 gtactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02012151.1/19064-18908 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 154 gtactccctccgtcccaaaata 133
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 99 tactccctccgtcccaaaataa 78
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP005586.3/39119-39252 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 131 gtactccctccgtcccaaaata 110
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 109 gtactccctccgtcccaaaata 88
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccaaaataa 92
>RF00906;MIR1122;AL662977.3/22853-22707 39947:Oryza sativa
Japonica Group
Length = 147
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 tagtactccctccgtcccaaaa 29
||||||||||||||||||||||
Sbjct: 2 tagtactccctccgtcccaaaa 23
>RF00906;MIR1122;AACV01024204.1/3332-3459 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 tagtactccctccgtcccaaaa 29
||||||||||||||||||||||
Sbjct: 2 tagtactccctccgtcccaaaa 23
>RF00906;MIR1122;AL772423.4/33732-33621 4530:Oryza sativa (rice)
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 tagtactccctccgtcccaaaa 29
||||||||||||||||||||||
Sbjct: 2 tagtactccctccgtcccaaaa 23
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 153 gtactccctccgtcccaaaata 132
>RF00906;MIR1122;AP008209.1/27314174-27314047 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01003177.1/25234-25117 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 4 gtactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 152 gtactccctccgtcccaaaata 131
>RF00906;MIR1122;AACV01008813.1/4556-4689 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 tattttggaacggagggagtat 108
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
>RF00906;MIR1122;AP008210.1/24813715-24813809 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 92 gtactccctccgtcccaaaata 71
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 109 gtactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 125 tactccctccgtcccaaaataa 104
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 tattttggaacggagggagtat 108
||||||||||||||||||||||
Sbjct: 71 tattttggaacggagggagtat 92
>RF00906;MIR1122;AACV01019101.1/4942-4817 39947:Oryza sativa
Japonica Group
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 9 agtactccctccgtcccaaaataagt 34
|||||||||||| |||||||||||||
Sbjct: 124 agtactccctccatcccaaaataagt 99
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaataa 32
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gtactccctccgtcccaaaata 31
||||||||||||||||||||||
Sbjct: 137 gtactccctccgtcccaaaata 116
