miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 119 bits (60), Expect = 1e-26
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 63 tagtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaat 122
||||||||| |||||||| |||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 2 tagtactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaat 61
Query: 123 gctcttatattagtttatagagggagta 150
||||||||||||||||| ||||| ||||
Sbjct: 62 gctcttatattagtttacagaggaagta 89
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 76 gtaaattaatataagatcctttagatcactaaaatagtgatctaaatgctcttatattag 135
||||| |||||||||| | |||||||||||| |||||| ||||| |||||||||||||
Sbjct: 79 gtaaactaatataagagcatttagatcactattttagtgacctaaacgctcttatattag 20
Query: 136 tttatagagggagtac 151
|||| ||||||||||
Sbjct: 19 tttacggagggagtac 4
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 107 bits (54), Expect = 6e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| |||||||| |||||||||| | |||||| ||||||||||||||||||| |||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 126 cttatattagtttatagagggagtac 151
|||||||||||||| |||||||||||
Sbjct: 29 cttatattagtttacagagggagtac 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 63 tagtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaat 122
||||||||| || ||||| |||||||||| | |||||||||||| |||| ||||||
Sbjct: 2 tagtactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaac 61
Query: 123 gctcttatattagtttatagagggagta 150
||||||||||||||||| |||||||||
Sbjct: 62 gctcttatattagtttacggagggagta 89
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 105 bits (53), Expect = 2e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| |||||||| ||||||||| | |||||||||||||| ||||||||| ||||||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 126 cttatattagtttatagagggagta 150
|||||||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || ||||| |||||||||| | || ||||||||| ||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgct 64
Query: 126 cttatattagtttatagagggagta 150
|||||||| |||| |||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 76 gtaaattaatataagatcctttagatcactaaaatagtgatctaaatgctcttatattag 135
||||| |||||||||| | |||||||||||||| |||||||||||| | |||||||||||
Sbjct: 15 gtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatattag 74
Query: 136 tttatagagggagtacaa 153
|||| |||||||||||||
Sbjct: 75 tttacagagggagtacaa 92
Score = 77.8 bits (39), Expect = 5e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 65 gtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgc 124
||||||| || ||||| |||||||||| | |||||||||||| |||||||||||| |
Sbjct: 90 gtactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaagg 31
Query: 125 tcttatattagtttatagaggga 147
||||||||||||||| |||||||
Sbjct: 30 tcttatattagtttacagaggga 8
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 99.6 bits (50), Expect = 1e-20
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 65 gtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgc 124
||||||| ||| |||| |||||||||| | ||||||| | ||||||||||||||||||||
Sbjct: 90 gtactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgc 31
Query: 125 tcttatattagtttatagagggagta 150
| ||||||||||||| ||||||||||
Sbjct: 30 ttttatattagtttacagagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || ||||| |||||||| | | |||||||||||| || | |||||||||||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 126 cttatattagtttatagagggagtac 151
||||||||||||||| ||||||||||
Sbjct: 65 cttatattagtttatggagggagtac 90
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || |||||||||||||||| | ||| ||||||||||||||||||||||| |||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 126 cttatattagttta 139
||||||||||||||
Sbjct: 65 cttatattagttta 78
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 73 tccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgctcttatat 132
|||||||| |||||||||| | |||||||||||| |||||||| ||| ||||||||||
Sbjct: 82 tccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttatat 23
Query: 133 tagtttatagagggagta 150
|| |||| ||||||||||
Sbjct: 22 taatttacagagggagta 5
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 97.6 bits (49), Expect = 5e-20
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| |||||||| |||||||||| | ||||||| |||| ||||||||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 126 cttatattagtttatagagggagta 150
|||||||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || ||||| |||||||||| | ||||||||||||||||||| ||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 126 cttatattagtttatagagggagta 150
|||||||||||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 97.6 bits (49), Expect = 5e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| |||||||| |||||||||| | ||||||| ||| || ||||| ||||||||||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 126 cttatattagtttatagagggagta 150
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
Score = 58.0 bits (29), Expect = 5e-08
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| ||| |||| |||||||||| | |||||| ||||| ||| ||||||||| |
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30
Query: 126 cttatattagtttatagagggagta 150
|||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 93.7 bits (47), Expect = 8e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 7 tactccctctgtcccaaaataagtgtcgttgagctagtacaaaatttgtactaatttagt 66
||||||||| |||| ||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 102 tactccctccgtcctaaaataagtgtcgttgatctagtacaaaatttgtactcatttagt 43
Query: 67 act 69
|||
Sbjct: 42 act 40
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 160 cgacacttattttgggacggagggaatattt 190
||||||||||||| ||||||||||| |||||
Sbjct: 75 cgacacttattttaggacggagggagtattt 105
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| |||||||| |||||||||| | ||||||||| ||||||||||||||||| |||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75
Query: 126 cttatattagt 136
|||||||||||
Sbjct: 74 cttatattagt 64
Score = 73.8 bits (37), Expect = 8e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 82 taatataagatcctttagatcactaaaatagtgatctaaatgctcttatattagtttata 141
|||||||||| | |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 66 taatataagagcgtttagatcactattttaatgatctaaatgctcttatattagtttacg 125
Query: 142 gagggagta 150
|||||||||
Sbjct: 126 gagggagta 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 95 tttagatcactaaaatagtgatctaaatgctcttatattagtttatagagggagtac 151
||||||||| |||||| ||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 60 tttagatcattaaaattatgacctaaacgctcttatattagtttacagagggagtac 4
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 91.7 bits (46), Expect = 3e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 65 gtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgc 124
||||||| |||||||| |||||||| | | |||||| ||||||||||||||||||| |
Sbjct: 4 gtactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgt 63
Query: 125 tcttatattagtttatagagggagta 150
||||||||||||||| ||||||||||
Sbjct: 64 tcttatattagtttacagagggagta 89
Score = 60.0 bits (30), Expect = 1e-08
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || ||||| |||||||||| | |||||||||||| |||| |||||| |||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 126 cttatattagtttatagagggagtac 151
||||||||||||| ||||||||||
Sbjct: 29 tttatattagtttacggagggagtac 4
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || ||||| |||||||||| | ||||||||||||| ||||||||||| |||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 126 cttatattagtttatagagggagta 150
|||||||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 73.8 bits (37), Expect = 8e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || ||||| |||||||||| | ||||||||||| ||||||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 126 cttatattagtttatagagggagta 150
|||||||||||||| ||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 89.7 bits (45), Expect = 1e-17
Identities = 78/89 (87%)
Strand = Plus / Plus
Query: 64 agtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatg 123
|||||||| || ||||| ||||||||| | |||||| ||||||| |||| |||||||||
Sbjct: 3 agtactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatg 62
Query: 124 ctcttatattagtttatagagggagtaca 152
|||||||||| |||||||||||||||||
Sbjct: 63 ctcttatatttctttatagagggagtaca 91
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || ||||| |||||||||| | |||||||||||||| |||||||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 126 cttatattagtt 137
||||||||||||
Sbjct: 65 cttatattagtt 76
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 82 taatataagatcctttagatcactaaaatagtgatctaaatgctcttatattagtttata 141
|||||||||| | |||||||||||| |||||||||||| ||||||||||||||||| |
Sbjct: 73 taatataagagcgtttagatcactactttagtgatctaaacgctcttatattagtttaca 14
Query: 142 gagggagta 150
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| |||||||| |||||||||| | |||||| ||||| |||||||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 126 cttatattagtttatagagggagtaca 152
|||||||| ||||||||||||||||||
Sbjct: 29 cttatattggtttatagagggagtaca 3
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 95 tttagatcactaaaatagtgatctaaatgctcttatattagtttatagagggagta 150
|||||||||||||||||||| |||||| ||||||||||||||||| |||||||||
Sbjct: 34 tttagatcactaaaatagtgttctaaacgctcttatattagtttacggagggagta 89
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 65 gtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgc 124
||||||| || ||||| |||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 4 gtactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgc 63
Query: 125 tcttatattagttta 139
|||||||||||||||
Sbjct: 64 tcttatattagttta 78
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 75 cgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgctcttatatta 134
|||||| |||||||||| | |||||| ||||| |||| |||||||| |||||||||||
Sbjct: 80 cgtaaactaatataagagcatttagaacactattttagtaatctaaatactcttatatta 21
Query: 135 gtttatagagggagtaca 152
||||| ||||||||||||
Sbjct: 20 gtttacagagggagtaca 3
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 83.8 bits (42), Expect = 8e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || ||||| |||||||||| | ||||||| |||||| ||||| ||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 126 cttatattagtttatagagggagtac 151
||||||||||||| || ||||||||
Sbjct: 65 tttatattagtttacagggggagtac 90
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 76 gtaaattaatataagatcctttagatcactaaaatagtgatctaaatgctcttatattag 135
||||| |||||||| | | |||||| ||||| |||| ||||||| |||||||||||||
Sbjct: 79 gtaaactaatataaaagcatttagaacactactttagtaatctaaacgctcttatattag 20
Query: 136 tttatagagggagta 150
|||| ||||||||||
Sbjct: 19 tttacagagggagta 5
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 67 actccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgctc 126
||||| || ||||| |||||||||| | ||||||||||||||||||||||| ||| |||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 127 ttatattagtttatagagggagtac 151
|||||||| |||| ||||||||||
Sbjct: 28 ttatattaatttacggagggagtac 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 65 gtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgc 124
||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| ||
Sbjct: 4 gtactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgc 63
Query: 125 tcttatattagtttatagagggagt 149
||||||||||||||| ||||||||
Sbjct: 64 tcttatattagtttactgagggagt 88
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || ||||| |||||||||| | |||| |||| ||||||||||||||||| ||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 126 cttatattagtttatagagggagta 150
|||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 73.8 bits (37), Expect = 8e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| |||||||| |||||||||| |||||||||||| || |||| ||||||||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 126 cttatattagtttatagagggagta 150
|||||||||||||| |||||||||
Sbjct: 65 cttatattagtttaccgagggagta 89
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 81.8 bits (41), Expect = 3e-15
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| |||||||| |||||||||| ||||||| |||| |||||||||||||| |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 126 cttatattagtttatagagggagtacaaa 154
||||||||||||| ||||||||||||||
Sbjct: 65 tttatattagtttacagagggagtacaaa 93
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 65 gtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgc 124
||||||| || ||||| |||||||| | | |||||||||||||| |||| ||||||| |
Sbjct: 90 gtactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacac 31
Query: 125 tcttatattagtttatagagggagta 150
||||||||||||||| |||||||||
Sbjct: 30 tcttatattagtttacggagggagta 5
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/80 (88%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 76 gtaaattaatataagatcctttagatcactaa--aatagtgatctaaatgctcttatatt 133
||||| |||||||||| | ||||||||||||| | |||||||||||| | |||||||||
Sbjct: 15 gtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtcttatatt 74
Query: 134 agtttatagagggagtacaa 153
|||||| |||||||||||||
Sbjct: 75 agtttacagagggagtacaa 94
Score = 67.9 bits (34), Expect = 5e-11
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 65 gtactccatccgtaaattaatataagatcctttagatcactaaaa--tagtgatctaaat 122
||||||| || ||||| |||||||||| | |||||||||||| | ||||||||||||
Sbjct: 92 gtactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaa 33
Query: 123 gctcttatattagtttatagaggga 147
| ||||||||||||||| |||||||
Sbjct: 32 ggtcttatattagtttacagaggga 8
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 81.8 bits (41), Expect = 3e-15
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 62 ttagtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaa 121
|||||||||| || ||||| |||||||| | | ||||||||||||| ||||||||||||
Sbjct: 1 ttagtactcc-tctgtaaactaatataaaagcatttagatcactaag-tagtgatctaaa 58
Query: 122 tgctcttatattagtttatagagggagta 150
|||||||||||||||||| |||||||||
Sbjct: 59 tgctcttatattagtttacggagggagta 87
Score = 79.8 bits (40), Expect = 1e-14
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| |||||||| |||||||||| | |||||||||||| ||||||||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcactact-tagtgatctaaatgct 29
Query: 126 cttatattagtttatagagg 145
||||||||||||| |||||
Sbjct: 28 tttatattagtttacagagg 9
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| ||||||||||||||||||| | ||||||| |||| |||||||||||| |||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 126 cttatattagtttatagagggagta 150
|||||| ||||||| ||| ||||||
Sbjct: 65 cttatagtagtttacagacggagta 89
Score = 73.8 bits (37), Expect = 8e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || ||||| || ||||||| | |||||||||||||| |||| ||||||| |||
Sbjct: 89 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 30
Query: 126 cttatattagtttatagagggagta 150
||||||||| |||| |||||||||
Sbjct: 29 cttatattaatttacggagggagta 5
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 77.8 bits (39), Expect = 5e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 73 tccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgctcttatat 132
|||||||| |||||||||| | |||||| |||||| || ||||||||||||| ||||||
Sbjct: 12 tccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgcttttatat 71
Query: 133 tagtttatagagggagtac 151
||||||| | |||||||||
Sbjct: 72 tagtttacaaagggagtac 90
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 77.8 bits (39), Expect = 5e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 77 taaattaatataagatcctttagatcactaaaatagtgatctaaatgctcttatattagt 136
|||| |||||||| | | ||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 16 taaactaatataaaagcgtttagatcattaag-tagtgatctaaatgctcttatattagt 74
Query: 137 ttatagagggagtac 151
||| |||||||||||
Sbjct: 75 ttacagagggagtac 89
Score = 65.9 bits (33), Expect = 2e-10
Identities = 76/89 (85%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 62 ttagtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaa 121
|||||||||| || ||||| |||||||||| | ||||||||||| | || |||||||||
Sbjct: 92 ttagtactccctctgtaaactaatataagagcatttagatcact-acttaatgatctaaa 34
Query: 122 tgctcttatattagtttatagagggagta 150
||| |||||||||||||| ||||||||
Sbjct: 33 cgcttttatattagtttatgaagggagta 5
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 94 ctttagatcactaaaatagtgatctaaatgctcttatattagtttatagagggagtac 151
||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 61 ctttagatcactactttagtgatctaaaagctcttatattagtttacagagggagtac 4
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 64 agtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaa 121
|||||||| || ||||| |||||||||| | |||||||||||||| ||||||||||||
Sbjct: 3 agtactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 71.9 bits (36), Expect = 3e-12
Identities = 72/83 (86%), Gaps = 7/83 (8%)
Strand = Plus / Plus
Query: 76 gtaaattaatataagatcctttagatcactaaaatagtga--tctaaatg-----ctctt 128
||||| |||||||||| | ||||||||||||||||||||| |||||||| |||||
Sbjct: 15 gtaaactaatataagagcatttagatcactaaaatagtgagatctaaatgaaacgctctt 74
Query: 129 atattagtttatagagggagtac 151
||||||||||| |||||||||||
Sbjct: 75 atattagtttacagagggagtac 97
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 110 tagtgatctaaatgctcttatattagtttatagaggg 146
|||||||||||||||||||||||||||||| ||||||
Sbjct: 45 tagtgatctaaatgctcttatattagtttacagaggg 9
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 4 ttgtactccctctgtcccaaaataagtgtcgttgagctagtacaaaatttgtactaattt 63
|||||||||||| || |||||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 2 ttgtactccctccgtatcaaaataagtgtcgctgatttagtataaaatttgtactaattt 61
Query: 64 agt 66
|||
Sbjct: 62 agt 64
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 7 tactccctctgtcccaaaataagtgtc 33
|||||||||||||||||||||||||||
Sbjct: 102 tactccctctgtcccaaaataagtgtc 76
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 63 tagtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaat 122
||||||||| || ||||| |||||||| | |||||||| ||||||||||||||||||
Sbjct: 2 tagtactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaac 61
Query: 123 gctcttatatt 133
|||||||||||
Sbjct: 62 gctcttatatt 72
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 83 aatataagatcctttagatcactaaaatagtgatctaaatgctcttatattagtttatag 142
||||||||| | |||||||||||| ||| |||||||| || |||||||| ||||| ||
Sbjct: 72 aatataagagcgtttagatcactattttagagatctaaacgcccttatatttgtttacag 13
Query: 143 agggagtac 151
|||||||||
Sbjct: 12 agggagtac 4
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 67.9 bits (34), Expect = 5e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| || ||||| |||||||| | |||| || |||||| |||||||||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacact 30
Query: 126 cttatattagtttatagagggagtac 151
|||||||||||||| |||||||||||
Sbjct: 29 cttatattagtttacagagggagtac 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 64 agtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatg 123
|||||||| || ||||| |||||||||| |||||||||||| |||| || ||||
Sbjct: 3 agtactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaa 62
Query: 124 ctcttatattagtttatagagggagta 150
|| ||||||||||||| ||||||||||
Sbjct: 63 cttttatattagtttacagagggagta 89
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 67.9 bits (34), Expect = 5e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 76 gtaaattaatataagatcctttagatcactaaaatagtgatctaaatgctcttatattag 135
||||| |||||||||| | || |||||| |||||| |||||||||| ||||||||||||
Sbjct: 15 gtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctcttatattag 74
Query: 136 tttatagagggagt 149
|||| ||||||||
Sbjct: 75 tttacggagggagt 88
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 67 actccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgctc 126
||||| |||||||| |||||||||| |||||||||| | || |||||| || ||||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 127 ttatattagttta 139
|||||||||||||
Sbjct: 28 ttatattagttta 16
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 67.9 bits (34), Expect = 5e-11
Identities = 76/89 (85%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 63 tagtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaat 122
||||||||| || ||||| |||||||||| ||||||| ||||||||||| ||||||
Sbjct: 2 tagtactccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaac 59
Query: 123 gctcttatattagtttatagagggagtac 151
||| ||||||||||||| ||||||||||
Sbjct: 60 gctattatattagtttacggagggagtac 88
Score = 60.0 bits (30), Expect = 1e-08
Identities = 75/89 (84%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 63 tagtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaat 122
||||||||| |||||||| |||||||| | | |||||| |||| |||| |||||||
Sbjct: 90 tagtactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaac 33
Query: 123 gctcttatattagtttatagagggagtac 151
|||||||||||||||| |||||||||||
Sbjct: 32 actcttatattagtttacagagggagtac 4
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 67.9 bits (34), Expect = 5e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 65 gtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgc 124
||||||| |||||| | ||||||||| |||||||||||||| |||| |||||||||
Sbjct: 4 gtactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaatga 63
Query: 125 tcttatattagtttatagagggagta 150
||||||||| |||| ||||||||||
Sbjct: 64 tcttatatttctttacagagggagta 89
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 67.9 bits (34), Expect = 5e-11
Identities = 76/89 (85%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 63 tagtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaat 122
||||||||| || ||||| |||||||| | ||||||| ||||||||||| ||||||
Sbjct: 2 tagtactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaac 59
Query: 123 gctcttatattagtttatagagggagtac 151
||||||||||||||||| ||||||||||
Sbjct: 60 gctcttatattagtttacggagggagtac 88
Score = 60.0 bits (30), Expect = 1e-08
Identities = 75/89 (84%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 63 tagtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaat 122
||||||||| |||||||| |||||||||| | |||||| |||| |||| |||||||
Sbjct: 90 tagtactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaac 33
Query: 123 gctcttatattagtttatagagggagtac 151
|| ||||||||||||| |||||||||||
Sbjct: 32 acttttatattagtttacagagggagtac 4
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 95 tttagatcactaaaatagtgatctaaatgctcttatattagtttatagagggagtac 151
|||||||||||||| |||||||||||| |||||||||| |||| |||||||||||
Sbjct: 32 tttagatcactaaagtagtgatctaaacactcttatatttctttacagagggagtac 88
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 63.9 bits (32), Expect = 8e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 97 tagatcactaaaatagtgatctaaatgctcttatattagtttatagag 144
|||||||||||| |||||||||||| ||||||||||| ||||| ||||
Sbjct: 58 tagatcactaaagtagtgatctaaacgctcttatatttgtttacagag 11
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 63.9 bits (32), Expect = 8e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 83 aatataagatcctttagatcactaaaatagtgatctaaatgctcttatattagtttatag 142
||||||||| | ||||||||||| || |||||||||||| ||||||||||| |||| ||
Sbjct: 22 aatataagagcgtttagatcactgaagtagtgatctaaacgctcttatatttctttacag 81
Query: 143 aggg 146
||||
Sbjct: 82 aggg 85
Score = 48.1 bits (24), Expect = 5e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 83 aatataagatcctttagatcactaaaatagtgatctaaatgctcttatattagtttatag 142
||||||||| | |||||||||||| ||||||||||| ||||||||||| |||| ||
Sbjct: 72 aatataagagcgtttagatcactacttcagtgatctaaacgctcttatatttctttacag 13
Query: 143 agggagta 150
||| ||||
Sbjct: 12 aggtagta 5
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 7 tactccctctgtcccaaaataagtgtcgttgagctagtacaaaatttgtactaatttagt 66
||||||||| |||||||||||||||||| || |||||| | ||||||||||| |||||
Sbjct: 102 tactccctccgtcccaaaataagtgtcgctgctctagtattatatttgtactaacttagt 43
Query: 67 act 69
|||
Sbjct: 42 act 40
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 158 tgcgacacttattttgggacggaggga 184
|||||||||||||||||||||||||||
Sbjct: 34 tgcgacacttattttgggacggaggga 8
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 159 gcgacacttattttgggacggaggga 184
||||||||||||||||||||||||||
Sbjct: 74 gcgacacttattttgggacggaggga 99
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtgtcg 34
||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtcg 32
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagt 113
|||||| || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctctgtaaagaaatataagatcgtttagatcactaaaatagt 52
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 161 gacacttattttgggacggagggaatat 188
||||||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggagggaatat 4
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 10 tccctctgtcccaaaataagtgtcgttgagctagtacaaa 49
|||||| ||||||||||||||||| |||| |||||||||
Sbjct: 8 tccctccgtcccaaaataagtgtcattgatttagtacaaa 47
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 159 gcgacacttattttgggacggaggga 184
||||||||||||||||||||| ||||
Sbjct: 73 gcgacacttattttgggacggcggga 98
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 118 taaatgctcttatattagtttatagagggagtaca 152
|||||||| ||||||||||||| ||||||||||||
Sbjct: 37 taaatgcttttatattagtttacagagggagtaca 3
Score = 44.1 bits (22), Expect = 7e-04
Identities = 70/86 (81%)
Strand = Plus / Plus
Query: 65 gtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgc 124
||||||| || ||||| |||||||| | | |||| || ||||||||| || | |||||
Sbjct: 4 gtactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataa 63
Query: 125 tcttatattagtttatagagggagta 150
| ||||||||||||| |||||||||
Sbjct: 64 ttttatattagtttacggagggagta 89
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 5 tgtactccctctgtcccaaaataagtgtcgt 35
||||||||||| |||||||||||||||||||
Sbjct: 104 tgtactccctcggtcccaaaataagtgtcgt 74
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 109 atagtgatctaaatgctcttatattagtttatagagggagtac 151
||||||||||||| ||||||||||| |||| |||||||||||
Sbjct: 42 atagtgatctaaacgctcttatatttctttacagagggagtac 84
Score = 48.1 bits (24), Expect = 5e-05
Identities = 71/87 (81%), Gaps = 6/87 (6%)
Strand = Plus / Minus
Query: 64 agtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatg 123
|||||||| || ||||| ||||||||| | |||||||||||| ||||||||| |
Sbjct: 85 agtactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacg 32
Query: 124 ctcttatattagtttatagagggagta 150
|||||||||| |||| ||||||||||
Sbjct: 31 ctcttatatttctttacagagggagta 5
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 161 gacacttattttgggacggagggaatattt 190
|||||||||||||||||||||||| |||||
Sbjct: 74 gacacttattttgggacggagggagtattt 103
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 161 gacacttattttgggacggaggga 184
||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggga 8
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtgtc 33
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctctgtcccaaaataagtgtc 33
||||||||| |||||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgtc 74
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 6 gtactccctctgtcccaaaataagtg 31
||||||||||||||||||||||||||
Sbjct: 65 gtactccctctgtcccaaaataagtg 40
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggaggga 8
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 161 gacacttattttgggacggagggaatattt 190
|||||||||||||||||||||||| |||||
Sbjct: 31 gacacttattttgggacggagggagtattt 2
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/54 (92%), Gaps = 3/54 (5%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtgtcgttgagc-tagtacaaaatttgtacta 59
||||||||| ||||||||||||||||| |||||| ||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc-ttgagcttagta-aaaatttgtacta 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 3 cttgtactccctctgtcccaaaataagtgtc 33
||||||||||||| ||||||||||||||||
Sbjct: 105 cttgtactccctccatcccaaaataagtgtc 75
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 52.0 bits (26), Expect = 3e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 65 gtactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgc 124
||||||| || ||||| ||||||||| | | |||||||||||| |||| ||||||| |
Sbjct: 4 gtactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacac 63
Query: 125 tcttatattagtttatagagggagta 150
||||||||| |||| |||||||||
Sbjct: 64 tcttatatttctttacggagggagta 89
Score = 48.1 bits (24), Expect = 5e-05
Identities = 72/88 (81%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| |||||||| ||||||||| ||||||| |||| |||||||||| | |||
Sbjct: 89 tactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgct 30
Query: 126 cttatattagtttatagagggagtacaa 153
|||||||| |||| ||| |||||||||
Sbjct: 29 cttatatttctttacagaaggagtacaa 2
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 3 cttgtactccctctgtcccaaaataagtg 31
||||||||| |||||||||||||||||||
Sbjct: 101 cttgtactcgctctgtcccaaaataagtg 73
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 110 tagtgatctaaatgctcttatattagtttatagagggagta 150
|||||||||||| |||||||||||| |||| | ||||||||
Sbjct: 52 tagtgatctaaacgctcttatattattttacatagggagta 92
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 50.1 bits (25), Expect = 1e-05
Identities = 60/71 (84%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaa---tagtgatctaaat 122
||||||||||||||| |||| |||| | | ||||||||||||| ||||||||||||
Sbjct: 92 tactccatccgtaaagaaatacaagagcgtctagatcactaaaatagtagtgatctaaac 33
Query: 123 gctcttatatt 133
| |||||||||
Sbjct: 32 gttcttatatt 22
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtg 31
|||||||||||||||||||||||||
Sbjct: 5 tactccctctgtcccaaaataagtg 29
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 88 cacttattttgggacggaggga 109
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 122 tgctcttatattagtttatagagggagta 150
|||||||||||||||||| ||||||||||
Sbjct: 33 tgctcttatattagtttacagagggagta 5
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtg 31
|||||||||||||||||||||||||
Sbjct: 5 tactccctctgtcccaaaataagtg 29
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 161 gacacttattttgggacggaggga 184
||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggga 8
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 161 gacacttattttgggacggaggga 184
||||||||||||||||||||||||
Sbjct: 75 gacacttattttgggacggaggga 98
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctctgtcccaaaataagtgtc 33
||||||||| |||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtc 75
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 161 gacacttattttgggacggaggga 184
||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggga 8
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 gacacttattttgggacggagg 182
||||||||||||||||||||||
Sbjct: 63 gacacttattttgggacggagg 84
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum (bread
wheat)
Length = 92
Score = 48.1 bits (24), Expect = 5e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 83 aatataagatcctttagatcactaaaatagtgatctaaatgctcttatattagtttatag 142
||||||||| | || |||||||| || |||||| ||||| ||||||||||| |||| |
Sbjct: 72 aatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttctttacgg 13
Query: 143 agggagta 150
||||||||
Sbjct: 12 agggagta 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 66 tactccatccgtaaattaatataagatcctttagatcactaaaatagtgatctaaatgct 125
|||||| |||||||| ||||||||| | ||||| |||||| |||||||| || |||
Sbjct: 5 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 64
Query: 126 cttatattagttta 139
|||||||| |||||
Sbjct: 65 cttatatttgttta 78
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 159 gcgacacttattttgggacggagg 182
||||||||||||||||||||||||
Sbjct: 78 gcgacacttattttgggacggagg 101
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 7 tactccctctgtcccaaaataagtgtcgttgagctagtacaaa 49
|||| |||| |||||||||||||||||| ||| |||||||||
Sbjct: 106 tactacctccgtcccaaaataagtgtcgctgatttagtacaaa 64
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 82
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 109 atagtgatctaaatgctcttatattagtttatagagggag 148
||||||||||||||| ||||||||| |||| ||||||||
Sbjct: 37 atagtgatctaaatgatcttatatttctttacagagggag 76
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 147 agtacaaaaactgcgacacttattttgggacg 178
||||| ||||| ||||||||||||||||||||
Sbjct: 62 agtactaaaacagcgacacttattttgggacg 93
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 161 gacacttattttgggacggaggga 184
||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggga 8
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 161 gacacttattttgggacggaggga 184
||||||||||||||||||||||||
Sbjct: 75 gacacttattttgggacggaggga 98
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtgtc 33
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctctgtcccaaaataagtgtc 33
||||||||| |||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtc 75
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 161 gacacttattttgggacggaggga 184
||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggga 8
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtgtc 33
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 161 gacacttattttgggacggaggga 184
||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggga 8
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtgtc 33
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 161 gacacttattttgggacggaggga 184
||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggga 8
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtgtc 33
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 161 gacacttattttgggacggaggga 184
||||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggga 8
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtgtc 33
||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 gtactccctctgtcccaaaataagtgtc 33
|||||||||| |||||||||||||||||
Sbjct: 102 gtactccctccgtcccaaaataagtgtc 75
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 161 gacacttattttgggacggaggga 184
||||||||||||||||||||||||
Sbjct: 75 gacacttattttgggacggaggga 98
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa Japonica
Group
Length = 247
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 162 acacttattttgggacggaggga 184
|||||||||||||||||||||||
Sbjct: 27 acacttattttgggacggaggga 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtgt 32
||||||||| ||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtgt 27
>RF00906;MIR1122;ABXC01004408.1/208298-208202 4558:Sorghum bicolor
(sorghum)
Length = 97
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctctgtcccaaaataagtgtc 33
|||||||||||||||||||| ||||||
Sbjct: 5 tactccctctgtcccaaaatgagtgtc 31
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 7 tactccctctgtcccaaaataagtgtcgttgagctagtacaaa 49
||||||| | |||||||||||||||||| ||| |||||||||
Sbjct: 82 tactcccaccgtcccaaaataagtgtcgctgatttagtacaaa 40
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 159 gcgacacttattttgggacggaggga 184
||||||||||||||||||||| ||||
Sbjct: 54 gcgacacttattttgggacggtggga 79
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 124 ctcttatattagtttatagagggagta 150
|||||||||||||||| ||||||||||
Sbjct: 31 ctcttatattagtttacagagggagta 5
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 161 gacacttattttgggacggaggg 183
|||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggaggg 9
>RF00906;MIR1122;AAAA02027128.1/44166-44066 39946:Oryza sativa
Indica Group
Length = 101
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 tgtactccctctgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 99 tgtactccctctgtcccaaaata 77
>RF00906;MIR1122;AP005313.3/33733-33833 39947:Oryza sativa
Japonica Group
Length = 101
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 tgtactccctctgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 99 tgtactccctctgtcccaaaata 77
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 tgtactccctctgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 3 tgtactccctctgtcccaaaata 25
>RF00906;MIR1122;AP004994.2/80471-80627 39947:Oryza sativa Japonica
Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 167 tattttgggacggagggaatatt 189
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggaatatt 3
>RF00906;MIR1122;AAAA02006934.1/24563-24655 39946:Oryza sativa
Indica Group
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 167 tattttgggacggagggaatatt 189
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggaatatt 3
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 220 cacttattttgggacggaggga 241
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
Japonica Group
Length = 246
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 gtactccctctgtcccaaaataagtg 31
|||||||||| |||||||||||||||
Sbjct: 1 gtactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggaggga 5
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggaggga 5
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggaggga 5
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 221 cacttattttgggacggaggga 242
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggaggga 237
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggaggga 5
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggaggga 237
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
Group
Length = 243
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggaggga 5
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa Japonica
Group
Length = 245
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggaggga 5
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggaggga 5
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggaggga 237
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 216 cacttattttgggacggaggga 237
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa Indica
Group
Length = 245
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 26 cacttattttgggacggaggga 5
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggaggga 8
>RF00906;MIR1122;CR626933.1/11895-11804 4571:Triticum turgidum
Length = 92
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 gacacttattttgggacggagg 182
||||||||||||||||||||||
Sbjct: 64 gacacttattttgggacggagg 85
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 115
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tccctctgtcccaaaataagtg 31
||||||||||||||||||||||
Sbjct: 8 tccctctgtcccaaaataagtg 29
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 gtactccctctgtcccaaaataagtg 31
|||||||||| |||||||||||||||
Sbjct: 112 gtactccctccgtcccaaaataagtg 87
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 87 cacttattttgggacggaggga 108
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 76 cacttattttgggacggaggga 97
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 4 ttgtactccctctgtcccaaaataagtgtc 33
|||||||||||| |||||||||||| ||||
Sbjct: 104 ttgtactccctccgtcccaaaataactgtc 75
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 gtactccctctgtcccaaaataagtg 31
|||||||||| |||||||||||||||
Sbjct: 112 gtactccctccgtcccaaaataagtg 87
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 87 cacttattttgggacggaggga 108
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 161 gacacttattttgggacggagggaatattt 190
|||| ||||||||||||||||||| |||||
Sbjct: 75 gacagttattttgggacggagggagtattt 104
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 161 gacacttattttgggacggagggaatattt 190
|||| ||||||||||||||||||| |||||
Sbjct: 75 gacagttattttgggacggagggagtattt 104
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggaggga 8
>RF00906;MIR1122;EU730894.1/50807-50703 15368:Brachypodium
distachyon
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 153 aaaactgcgacacttattttgg 174
||||||||||||||||||||||
Sbjct: 39 aaaactgcgacacttattttgg 18
>RF00906;MIR1122;EU730897.1/62277-62172 15368:Brachypodium
distachyon
Length = 106
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 gtacaaaatttgtactaatttagtac 68
|||||||||||||||||| |||||||
Sbjct: 41 gtacaaaatttgtactaacttagtac 66
>RF00906;MIR1122;AAAA02014858.1/37527-37621 39946:Oryza sativa
Indica Group
Length = 95
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 gtactccctctgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccaaaata 25
>RF00906;MIR1122;AAAA02005900.1/34221-34065 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 gtactccctctgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccaaaata 25
>RF00906;MIR1122;AAAA02021026.1/44639-44772 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 167 tattttgggacggagggaatat 188
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggaatat 4
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 163 cacttattttgggacggaggga 184
||||||||||||||||||||||
Sbjct: 29 cacttattttgggacggaggga 8
>RF00906;MIR1122;AC020666.8/128854-128945 39947:Oryza sativa
Japonica Group
Length = 92
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 gtactccctctgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccaaaata 25
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctctgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 117 tactccctctgtcccaaaataa 96
>RF00906;MIR1122;AAAA02021906.1/16695-16573 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctctgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 119 tactccctctgtcccaaaataa 98
>RF00906;MIR1122;AAAA02019539.1/50507-50413 39946:Oryza sativa
Indica Group
Length = 95
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 166 ttattttgggacggagggaata 187
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggaata 5
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 gtactccctctgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccaaaata 25
>RF00906;MIR1122;AACV01002422.1/2768-2895 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 gtactccctctgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccaaaata 25
>RF00906;MIR1122;AP008210.1/8188364-8188253 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 167 tattttgggacggagggaatat 188
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggaatat 4
>RF00906;MIR1122;AP004256.3/9033-9136 39947:Oryza sativa Japonica
Group
Length = 104
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 166 ttattttgggacggagggaata 187
||||||||||||||||||||||
Sbjct: 79 ttattttgggacggagggaata 100
>RF00906;MIR1122;AACV01019763.1/6220-6087 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 166 ttattttgggacggagggaata 187
||||||||||||||||||||||
Sbjct: 109 ttattttgggacggagggaata 130
>RF00906;MIR1122;AAAA02007860.1/10023-9886 39946:Oryza sativa Indica
Group
Length = 138
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 166 ttattttgggacggagggaata 187
||||||||||||||||||||||
Sbjct: 113 ttattttgggacggagggaata 134
>RF00906;MIR1122;AL512546.2/55731-55825 4530:Oryza sativa (rice)
Length = 95
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 gtactccctctgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccaaaata 25
>RF00906;MIR1122;AP008207.1/24395058-24395107 39947:Oryza sativa
Japonica Group
Length = 50
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 gtactccctctgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccaaaata 25
>RF00906;MIR1122;AP004891.4/64233-64389 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 gtactccctctgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 gtactccctctgtcccaaaata 25
