miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 168 bits (85), Expect = 2e-41
Identities = 146/165 (88%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 21 ctactccctccgttcctaaatataagtctttctacatgtttcactaatggactacataca 80
||||||||||||||||||||||||||||||| || | |||||||||||||||||||||
Sbjct: 165 ctactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacg 106
Query: 81 gatgtatatagacatactttata-tatagattcactaattttgctccgcatgtagacacc 139
||||||||||||||||||||| | | || ||||| | ||||||||||| ||||||||| |
Sbjct: 105 gatgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatc 46
Query: 140 taatgaaatatcttaaaagacttatatttaggtatggaggaagta 184
|| |||||| ||||||||||||||||||||| | ||||| ||||
Sbjct: 45 tagtgaaatcgcttaaaagacttatatttaggaacggagggagta 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataagtcttt 51
||||||||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttt 30
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 143 bits (72), Expect = 1e-33
Identities = 142/164 (86%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataagtctttctacatgtttcactaatggactacatacag 81
|||||||||||||||||||||||||||||| || | ||||||||| | |||||||| | |
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 60
Query: 82 atgtatatagacatacttta-tatatagattcactaattttgctccgcatgtagacacct 140
||||||||||||||| |||| ||||||||||||| ||||||||||| |||||| | ||
Sbjct: 61 atgtatatagacatattttagaatatagattcactcattttgctccgtatgtagtcgtct 120
Query: 141 aatgaaatatcttaaaagacttatatttaggtatggaggaagta 184
| ||||| ||| |||||||||||||||||| | ||||| ||||
Sbjct: 121 agcgaaatctctaaaaagacttatatttaggaacggagggagta 164
Score = 63.9 bits (32), Expect = 8e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 20 tctactccctccgttcctaaatataagtcttt 51
||||||||||||||||||||||||||||||||
Sbjct: 166 tctactccctccgttcctaaatataagtcttt 135
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 127 bits (64), Expect = 6e-29
Identities = 139/164 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataagtctttctacatgtttcactaatggactacatacag 81
|||||||||||||||||||||||||||||| || | ||||||||| ||||||||||| |
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106
Query: 82 atgtatatagacatactttatatatagattcactaattttgctccgcatgtagacaccta 141
|||||||||||||||||| || ||||||||| |||||||||| |||||| | | ||
Sbjct: 105 atgtatatagacatacttagagtacagattcactcattttgctccatatgtagcccctta 46
Query: 142 atgaaatatcttaaaagacttatatttaggtatggaggaagtat 185
||||| ||| |||||||||| ||||||| | ||||| |||||
Sbjct: 45 gagaaatctctaaaaagacttacatttaggaacggagggagtat 2
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataagtcttt 51
|||||||||||||||||||| |||||||||
Sbjct: 3 tactccctccgttcctaaatgtaagtcttt 32
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 117 attttgctccgcatgtagacacctaatgaaatatcttaaaagacttatatttaggtatgg 176
||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| ||
Sbjct: 72 attttgctccgtatgtagacacctagtgaaatatcttaaaagacttatatttaagtacgg 13
Query: 177 aggaagtatat 187
||| |||||||
Sbjct: 12 agggagtatat 2
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataagtctttc 52
|||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagtctttc 108
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataagtcttt 51
|||||||||||| | |||||||||||||||
Sbjct: 5 tactccctccgtacttaaatataagtcttt 34
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 155 aaagacttatatttaggtatggaggaagtatatg 188
||||||||||||||||| | ||||| ||||||||
Sbjct: 109 aaagacttatatttaggaacggagggagtatatg 142
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 97.6 bits (49), Expect = 6e-20
Identities = 134/166 (80%), Gaps = 16/166 (9%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataagtctttctacatgtttcactaatggactacatacag 81
|||||||||||||||||||||||||||||| | | |||||| || ||||||| |||| |
Sbjct: 5 tactccctccgttcctaaatataagtctttaaagaagtttcattagtggactatatacgg 64
Query: 82 atgtatatagacatactttatatatagattcactaattttgctccgcatgtagacaccta 141
||||||||||||||| ||| ||||||||||| |||||||| |||
Sbjct: 65 atgtatatagacata----------------actcattttgctccgtatgtagactacta 108
Query: 142 atgaaatatcttaaaagacttatatttaggtatggaggaagtatat 187
||||||||||||||||||||||||||||| | ||||| |||||||
Sbjct: 109 gtgaaatatcttaaaagacttatatttaggaacggagggagtatat 154
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataagtcttt 51
||||||||||||||||||||||||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttt 122
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 139 ctaatgaaatatcttaaaagacttatatttaggtatggaggaagtatat 187
||||||||| |||| ||||||||||||||||| | ||||| |||||||
Sbjct: 50 ctaatgaaacttctttaaagacttatatttaggaacggagggagtatat 2
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/151 (84%), Gaps = 3/151 (1%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataagtctttctacatgtttcactaatggactacatacag 81
|||||||||||||||||||||||||||||| || | ||| | | ||||||||||||| |
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagatttgaat-atggactacatacgg 108
Query: 82 atgtatatagacatactttata-tatagattcactaattttgctccgcatgtagacacct 140
||| |||||||| || |||| | | |||||||||| ||||||||||| |||||| | | |
Sbjct: 107 atgaatatagacgtattttagagtgtagattcactcattttgctccgtatgtagtc-cat 49
Query: 141 aatgaaatatcttaaaagacttatatttagg 171
| | ||| ||| ||||||||||||||||||
Sbjct: 48 attagaatctctaaaaagacttatatttagg 18
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataagtcttt 51
||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctctgttcctaaatataagtcttt 34
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 83.8 bits (42), Expect = 8e-16
Identities = 137/166 (82%), Gaps = 2/166 (1%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataagtctttctacatgtttcactaatggactacatacag 81
||||||||||||||||||||||||| | || || | || |||| | ||||||||| |
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagattgtacta-taaactacatacgg 59
Query: 82 atgtatatagacatactttata-tatagattcactaattttgctccgcatgtagacacct 140
||||| ||||||||| |||| | |||||||||||| ||||||||||| |||||| | |||
Sbjct: 60 atgtacatagacatattttagagtatagattcactcattttgctccgtatgtagtctcct 119
Query: 141 aatgaaatatcttaaaagacttatatttaggtatggaggaagtata 186
| ||||||| || ||| | ||||||||| || | ||||| ||||||
Sbjct: 120 agtgaaatacctaaaaggtcttatattttggaacggagggagtata 165
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 77.8 bits (39), Expect = 5e-14
Identities = 94/111 (84%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataagtctttctacatgtttcactaatggactacatacag 81
||||||||||||||||||||||||||||| || || ||||||| ||||| |||||| |
Sbjct: 165 tactccctccgttcctaaatataagtcttcgtagatatttcact-gtggaccacatacgg 107
Query: 82 atgtatatagacatactttatatatagattcactaattttgctccgcatgt 132
||||||||||| | ||||| | |||||||||| ||||| ||||| ||||
Sbjct: 106 atgtatatagatgcattttatgtgtagattcactcatttttctccgtatgt 56
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataagtcttt 51
|||||||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 65.9 bits (33), Expect = 2e-10
Identities = 135/165 (81%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataagtctttctacatgtttcactaatggactacatacag 81
|||||||||| ||||||||||||||||||| || | ||||||| |||||| |||||| |
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcact-atggaccacatacgg 105
Query: 82 atgtatatagacatactttata-tatagattcactaattttgctccgcatgtagacacct 140
|||||| |||| | |||| | ||||| |||||| ||||| ||||| |||| | | | |
Sbjct: 104 atgtatgtagatgcattttagagtataggttcactcattttactccgtatgtggtc-cat 46
Query: 141 aatgaaatatcttaaaagacttatatttaggtatggaggaagtat 185
|||||||| | | ||||||||||||||||| | ||||| |||||
Sbjct: 45 aatgaaatctgtccaaagacttatatttaggaacggagggagtat 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataagtcttt 51
||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatataagtcttt 31
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 155 aaagacttatatttaggtatggaggaagta 184
||||||||||||||||| ||||||| ||||
Sbjct: 134 aaagacttatatttaggaatggagggagta 163
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 65.9 bits (33), Expect = 2e-10
Identities = 122/149 (81%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataagtctttctacatgtttcactaatggactacataca 80
|||||||||||||||||||||||||| | || || | || |||| | |||||||||
Sbjct: 3 ctactccctccgttcctaaatataagaccttttagagattgtacta-taaactacatacg 61
Query: 81 gatgtatatagacatactttata-tatagattcactaattttgctccgcatgtagacacc 139
|||||| ||||||||| |||| | ||||||||| || ||||||||||| |||||| | |
Sbjct: 62 gatgtacatagacatattttagagtatagattcgctcattttgctccgtatgtagtcttc 121
Query: 140 taatgaaatatcttaaaagacttatattt 168
|| ||||||| || ||| | |||||||||
Sbjct: 122 tagtgaaatacctaaaaggtcttatattt 150
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 63.9 bits (32), Expect = 8e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataagtctttctacatgtttcactaatggactacatacag 81
||||||||||||||||||||||||| | || || | || |||| ||| ||||||||| |
Sbjct: 166 tactccctccgttcctaaatataagaccttttaggtattacact-atgaactacatacgg 108
Query: 82 atgtatatagacatacttta 101
||||||||||||||| ||||
Sbjct: 107 atgtatatagacatatttta 88
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataag 29
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataagtcttt 51
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
Score = 56.0 bits (28), Expect = 2e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 107 agattcactaattttgctccgcatgtagacacctaatgaaatatcttaaaagacttatat 166
||||||||| ||||||||||| |||||| | | || || ||| ||| |||||||||||||
Sbjct: 81 agattcactcattttgctccgtatgtagtc-catagtgtaatctctaaaaagacttatat 23
Query: 167 ttaggtatggaggaagtata 186
||||| | ||||| ||||||
Sbjct: 22 ttaggaacggagggagtata 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 26 ccctccgttcctaaatataagtc 48
|||||||||||||||||||||||
Sbjct: 111 ccctccgttcctaaatataagtc 89
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataagtctttctacatgtttcactaatggactacatac 79
|||||||||| |||||||||||||||||||||| | ||||||| | |||||||||||
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcact-acggactacatac 61
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataagtcttt 51
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataagtctttctacatgtttcactaatggactacatac 79
|||||||||||||||||||||||||||| | || | ||||||| |||||||||||||
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcact-atggactacatac 105
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 54.0 bits (27), Expect = 8e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 21 ctactccctccgttcctaaatataagtctttctacatgtttcactaatggactacatac 79
|||||||||||||||||||||||||| | || |||| ||||||| || ||||||||||
Sbjct: 164 ctactccctccgttcctaaatataagaccttttacaaatttcact-atagactacatac 107
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||||||||||||||||
Sbjct: 1 ctactccctccgttcctaaatataag 26
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataag 29
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatataag 46
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataag 46
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataa 45
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 actccctccgttcctaaatataag 46
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataagt 47
|||||||||||||||| ||||||||||
Sbjct: 4 ctactccctccgttccaaaatataagt 30
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatata 44
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;EU730896.1/84586-84679 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 20 tctactccctccgttcctaaata 42
|||||||||||||||||||||||
Sbjct: 92 tctactccctccgttcctaaata 70
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 tctactccctccgttcctaaatataag 46
|||||||||||||| ||||||||||||
Sbjct: 3 tctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01007836.1/7963-7867 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 20 tctactccctccgttcctaaatataag 46
|||||||||||||| ||||||||||||
Sbjct: 95 tctactccctccgtccctaaatataag 69
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 tctactccctccgttcctaaatataag 46
|||||||||||||| ||||||||||||
Sbjct: 3 tctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 tctactccctccgttcctaaatataag 46
|||||||||||||| ||||||||||||
Sbjct: 3 tctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatata 44
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 20 tctactccctccgttcctaaatataag 46
|||||||||||||| ||||||||||||
Sbjct: 155 tctactccctccgtccctaaatataag 129
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatat 43
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatat 43
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatat 43
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatat 43
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatat 43
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatat 43
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatat 43
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgttcctaaatat 43
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa Japonica
Group
Length = 110
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 107 ctactccctccgtccctaaatataag 82
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 153 ctactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02028211.1/1243-1359 39946:Oryza sativa
Indica Group
Length = 117
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 112 ctactccctccgtccctaaatataag 87
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 21 ctactccctccgttcctaaatataagtctttcta 54
|||||||||||||||| |||||||||| |||||
Sbjct: 159 ctactccctccgttccacaatataagtcattcta 126
>RF00906;MIR1122;AC136448.2/118247-118097 39947:Oryza sativa
Japonica Group
Length = 151
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AC120985.3/48011-47950 39947:Oryza sativa
Japonica Group
Length = 62
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 59 ctactccctccgtccctaaatataag 34
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataag 46
||||| ||||||||||||||||||||
Sbjct: 4 ctacttcctccgttcctaaatataag 29
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataagt 47
|||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02019543.1/35421-35577 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 154 ctactccctccgtccctaaatataag 129
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 tactccctccgttcctaaatataagt 47
||||| ||||||||||||||||||||
Sbjct: 146 tactcactccgttcctaaatataagt 121
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 21 ctactccctccgttcctaaatataag 46
||||||||||||| ||||||||||||
Sbjct: 129 ctactccctccgtccctaaatataag 104
