miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 165 bits (83), Expect = 3e-40
Identities = 143/163 (87%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
||||||||||||||||||||||||||||||||| |||| ||||| |||||||| | |
Sbjct: 2 actccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgga 61
Query: 73 gcaaaatgaatgaatctacactctataagatgtctatatacatacgtatgtagtccacta 132
||||||||| ||||| ||||||||| | |||||||||||||| ||||||||||||| ||
Sbjct: 62 gcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtccatta 121
Query: 133 atgatacctctttaaagacttatatttaggaacggagggagta 175
||| | |||| ||||||||||||||||||||||||||||||
Sbjct: 122 gtgaaatctctacaaagacttatatttaggaacggagggagta 164
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaacggagggagta 175
||||||||||||||||||||||||||||||
Sbjct: 30 aaagacttatatttaggaacggagggagta 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtcttt 41
|||||||||||||||||||||||||||||
Sbjct: 163 actccctccgttcctaaatataagtcttt 135
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 149 bits (75), Expect = 2e-35
Identities = 141/163 (86%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
|||||||||||||||||||||||||||||| ||| |||| |||| ||||||| | |
Sbjct: 163 actccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgga 104
Query: 73 gcaaaatgaatgaatctacactctataagatgtctatatacatacgtatgtagtccacta 132
||||||||| |||||||| | |||| || |||||||||||||| || |||||||| ||||
Sbjct: 103 gcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctacta 44
Query: 133 atgatacctctttaaagacttatatttaggaacggagggagta 175
||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 43 gtgaaacctctaaaaagacttatatttaggaacggagggagta 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtctttt 42
||||||||||||||||||||||||||||||
Sbjct: 2 actccctccgttcctaaatataagtctttt 31
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 146 aaagacttatatttaggaacggagggagta 175
||||||||||||||||||||||||||||||
Sbjct: 135 aaagacttatatttaggaacggagggagta 164
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 133 bits (67), Expect = 9e-31
Identities = 140/163 (85%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
||||||||||||||||||| |||||||||| ||| |||| ||| | ||||||||| |
Sbjct: 4 actccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgga 63
Query: 73 gcaaaatgaatgaatctacactctataagatgtctatatacatacgtatgtagtccacta 132
||||||||| ||||||| |||||| | |||||||||||||| |||||||||||| |||
Sbjct: 64 gcaaaatgagtgaatctgtactcta-agtatgtctatatacatccgtatgtagtccccta 122
Query: 133 atgatacctctttaaagacttatatttaggaacggagggagta 175
||| || ||| ||||||||||||||||||||||||||||||
Sbjct: 123 gtgaaacttctaaaaagacttatatttaggaacggagggagta 165
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtctttt 42
||||||||||||||||||||||||||||||
Sbjct: 164 actccctccgttcctaaatataagtctttt 135
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaacggagggagtat 176
||||||||| |||||||||||||||||||||
Sbjct: 32 aaagacttacatttaggaacggagggagtat 2
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 127 bits (64), Expect = 6e-29
Identities = 136/164 (82%), Gaps = 17/164 (10%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
||||||||||||||||||||||||||||||||||||||| ||||| | |||||||| | |
Sbjct: 150 actccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgga 91
Query: 73 gcaaaatgaatgaatctacactctataagatgtctatatacatacgtatgtagtccacta 132
||||||||| | | ||||||||||||| ||||| ||||||||||
Sbjct: 90 gcaaaatgagtta-----------------tgtctatatacatccgtatatagtccacta 48
Query: 133 atgatacctctttaaagacttatatttaggaacggagggagtat 176
|||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 47 atgaaacttctttaaagacttatatttaggaacggagggagtat 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 141 tctttaaagacttatatttaggaacggagggagtat 176
|||| |||||||||||||||||||||||||||||||
Sbjct: 117 tcttaaaagacttatatttaggaacggagggagtat 152
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtcttttaaga 46
||||||||||||||||||||||||||||| ||||
Sbjct: 6 actccctccgttcctaaatataagtctttaaaga 39
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 127 bits (64), Expect = 6e-29
Identities = 141/164 (85%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
|||||||| ||||||||||||||||||||| ||| ||| || || | | ||||||| | |
Sbjct: 6 actccctctgttcctaaatataagtctttttagagattctaatatgga-ctacatacgga 64
Query: 73 gcaaaatgaatgaatctacactctataagatgtctatatacatacgtatgtagtccacta 132
||||||||| ||||||||||||||| || | |||||||| ||| ||||||||||||| ||
Sbjct: 65 gcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtcca-ta 123
Query: 133 atgatacctctttaaagacttatatttaggaacggagggagtat 176
| | | |||| |||||||||||||||||||||||||||||||
Sbjct: 124 ttcaaatctctaaaaagacttatatttaggaacggagggagtat 167
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtcttttaagatattt 51
|||||||||||||||||||||||||||||| ||| ||||
Sbjct: 165 actccctccgttcctaaatataagtctttttagagattt 127
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaacggagggagta 175
|||||||||||||||||||| |||||||||
Sbjct: 34 aaagacttatatttaggaacagagggagta 5
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 99.6 bits (50), Expect = 1e-20
Identities = 98/114 (85%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
|||||||||||||| ||||||||| | ||| || ||||| ||||||| ||||||| | |
Sbjct: 162 actccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgga 103
Query: 73 gcaaaatgaatgaatctacactctataagatgtctatatacatacgtatgtagt 126
||||||||| |||||||| |||||| || |||||||| ||||| ||||||||||
Sbjct: 102 gcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagt 49
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataag 36
||||||||||||||||||||||||
Sbjct: 2 actccctccgttcctaaatataag 25
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
||||||||| ||||||||||||||||
Sbjct: 139 cttatattttggaacggagggagtat 164
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 85.7 bits (43), Expect = 2e-16
Identities = 135/163 (82%), Gaps = 7/163 (4%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
||||||||||||||||||||||||||| | ||| |||| |||| | | ||||||| |||
Sbjct: 160 actccctccgttcctaaatataagtctctgtagagatttcactatgga-ctacatacgaa 102
Query: 73 gcaaaatgaatgaatctacactctataagatgtctatatacatacgtatgtagtccacta 132
||||||||| ||||||||||||||| || ||||||||| ||||| ||||| ||
Sbjct: 101 gcaaaatgagtgaatctacactctaaaatgcatctatatac-----tatgtggtcca-ta 48
Query: 133 atgatacctctttaaagacttatatttaggaacggagggagta 175
|| | |||| ||||||||||||||||||||||||||||||
Sbjct: 47 gtggaatctctacaaagacttatatttaggaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtcttt 41
|||||||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataagtcttt 34
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 148 agacttatatttaggaacggagggagta 175
||||||||||||||||||||||||||||
Sbjct: 134 agacttatatttaggaacggagggagta 161
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 83.8 bits (42), Expect = 8e-16
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
|||||||||||||| ||||||||| | ||| || ||||| ||||| | ||||||| | |
Sbjct: 165 actccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgga 106
Query: 73 gcaaaatgaatgaatctacactctataagatgtctatatacatacgtatgtagt 126
||||||||| ||||||| |||||| || |||||||| ||||| ||||||||||
Sbjct: 105 gcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt 52
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataag 36
||||||||||||||||||||||||
Sbjct: 5 actccctccgttcctaaatataag 28
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
||||||||||| | ||||||||||||||||||||||||| |||||| |||||||| | |
Sbjct: 6 actccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacgga 65
Query: 73 gcaaaat 79
|||||||
Sbjct: 66 gcaaaat 72
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 146 aaagacttatatttaggaacggagggagtat 176
|||||||||||||||||||||||||||||||
Sbjct: 109 aaagacttatatttaggaacggagggagtat 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtcttt 41
|||||||||||||||||||||||||||||
Sbjct: 137 actccctccgttcctaaatataagtcttt 109
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 141 tctttaaagacttatatttaggaacggagggagtat 176
|||| ||||||||||||||| | |||||||||||||
Sbjct: 39 tcttaaaagacttatatttaagtacggagggagtat 4
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 71.9 bits (36), Expect = 3e-12
Identities = 136/165 (82%), Gaps = 7/165 (4%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
||||||||||||||||||||||||||||| ||| |||| |||| | | ||||| | |
Sbjct: 6 actccctccgttcctaaatataagtctttggagagatttcacta-tagaccacatacgga 64
Query: 73 gcaaaatgaatgaatctacactctataagatg--tctatatacatacgtatgtagtccac 130
| ||||||| ||||||||||| |||| ||| ||||||||||| ||||||| ||||||
Sbjct: 65 gaaaaatgagtgaatctacac---ataaaatgcatctatatacatccgtatgtggtccac 121
Query: 131 taatgatacctctttaaagacttatatttaggaacggagggagta 175
| ||| | ||| |||||||||||||||||||||||||||||
Sbjct: 122 -agtgaaatatctacgaagacttatatttaggaacggagggagta 165
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaacggagggagta 175
||||||||||||||||||||||||||||||
Sbjct: 34 aaagacttatatttaggaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtctt 40
||||||||||||||||||||||||||||
Sbjct: 164 actccctccgttcctaaatataagtctt 137
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 65.9 bits (33), Expect = 2e-10
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
|||||||||||||||||||||||||||||| ||| ||| |||| | | ||||||| | |
Sbjct: 6 actccctccgttcctaaatataagtctttttagagattacactatgga-ctacatacgga 64
Query: 73 gcaaaatgaatgaatct 89
||||||||| |||||||
Sbjct: 65 gcaaaatgagtgaatct 81
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaacggagggagtat 176
|||||||||||||||||||||||||||||||
Sbjct: 34 aaagacttatatttaggaacggagggagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 ccctccgttcctaaatataagtc 38
|||||||||||||||||||||||
Sbjct: 111 ccctccgttcctaaatataagtc 89
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 gacttatatttaggaacggaggg 171
|||||||||||||||||||||||
Sbjct: 89 gacttatatttaggaacggaggg 111
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaacggagggagtat 176
|||||||||||||||||||||||||||||||
Sbjct: 31 aaagacttatatttaggaacggagggagtat 1
Score = 61.9 bits (31), Expect = 3e-09
Identities = 132/163 (80%), Gaps = 2/163 (1%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
||||||||||||||||||||||||||||| | | |||| | || | | | ||||| | |
Sbjct: 3 actccctccgttcctaaatataagtctttggacagatttcattatgga-ccacatacgga 61
Query: 73 gcaaaatgaatgaatctacactctataagatgtctatatacatacgtatgtagtccacta 132
| ||||||| |||| ||| |||||| || |||| |||||| ||||||| ||||| ||
Sbjct: 62 gtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtcca-ta 120
Query: 133 atgatacctctttaaagacttatatttaggaacggagggagta 175
||| | |||| ||||||||||||||||||| ||||||||||
Sbjct: 121 gtgaaatctctacaaagacttatatttaggaatggagggagta 163
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtcttt 41
||||||||| |||||||||||||||||||
Sbjct: 162 actccctccattcctaaatataagtcttt 134
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 60.0 bits (30), Expect = 1e-08
Identities = 94/114 (82%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
|||||||||||||||||||||||| | ||| ||| ||| ||||| | | ||||||| | |
Sbjct: 6 actccctccgttcctaaatataagaccttttagaaattctactatgga-ctacatacgga 64
Query: 73 gcaaaatgaatgaatctacactctataagatgtctatatacatacgtatgtagt 126
||||| ||| || ||| || ||| || |||||||||||||| ||||||||||
Sbjct: 65 acaaaacaaataaacctataccctaaaatatgtctatatacatccgtatgtagt 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggagggagta 175
|||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataag 36
||||||||||||||||||||||||
Sbjct: 165 actccctccgttcctaaatataag 142
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaacggagggagtat 176
||||||||||||||||||| |||||||||||
Sbjct: 34 aaagacttatatttaggaaaggagggagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataagtcttt 41
||||||||| |||||||||||||||||||
Sbjct: 6 actccctcctttcctaaatataagtcttt 34
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 54.0 bits (27), Expect = 7e-07
Identities = 131/163 (80%), Gaps = 2/163 (1%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataagtcttttaagatattttactaggaatctacatatgaa 72
|||||||||||||||||||||||| | ||| | | |||| |||| | ||||||| | |
Sbjct: 162 actccctccgttcctaaatataagaccttttacaaatttcactataga-ctacatacgga 104
Query: 73 gcaaaatgaatgaatctacactctataagatgtctatatacatacgtatgtagtccacta 132
||||||||| ||||| |||| | | || ||| ||| |||||| |||||||||| | ||
Sbjct: 103 gcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagttta-ta 45
Query: 133 atgatacctctttaaagacttatatttaggaacggagggagta 175
||| | |||| || | |||||||||||||||||||||||||
Sbjct: 44 gtgagatctctaaaaggtcttatatttaggaacggagggagta 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagta 175
|||||||||||||||||||||||||
Sbjct: 139 cttatatttaggaacggagggagta 163
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataag 36
||||||||||||||||||||||||
Sbjct: 3 actccctccgttcctaaatataag 26
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa Japonica
Group
Length = 119
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggagggagtat 176
||||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagtat 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataag 36
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 152 ttatatttaggaacggagggagtat 176
|||||||||||||||||||||||||
Sbjct: 92 ttatatttaggaacggagggagtat 116
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataa 35
|||||||||||||||||||||||
Sbjct: 114 actccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagta 175
|||||||||||||||||||||||||
Sbjct: 52 cttatatttaggaacggagggagta 76
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatataag 36
||||||||||||||||||||||||
Sbjct: 75 actccctccgttcctaaatataag 52
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggagggagtatg 177
||||||||||||||| |||||||||||
Sbjct: 29 cttatatttaggaacagagggagtatg 3
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggagggagta 175
|||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataag 36
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 153 tatatttaggaacggagggagtat 176
||||||||||||||||||||||||
Sbjct: 27 tatatttaggaacggagggagtat 4
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatata 34
||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatata 27
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggagggagt 174
||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagt 6
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataag 36
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
Japonica Group
Length = 155
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtatgt 178
|||||||||||| |||||||||||||||
Sbjct: 127 cttatatttagggacggagggagtatgt 154
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 atatttaggaacggagggagtat 176
|||||||||||||||||||||||
Sbjct: 217 atatttaggaacggagggagtat 239
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 154 atatttaggaacggagggagtat 176
|||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagtat 1
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tatatttaggaacggagggagta 175
|||||||||||||||||||||||
Sbjct: 67 tatatttaggaacggagggagta 89
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 13 actccctccgttcctaaatata 34
||||||||||||||||||||||
Sbjct: 88 actccctccgttcctaaatata 67
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 150 acttatatttaggaacggagggagtat 176
|||||||||||||||||||| ||||||
Sbjct: 121 acttatatttaggaacggagtgagtat 147
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtatg 177
||||||||| |||||||||||||||||
Sbjct: 67 cttatattttggaacggagggagtatg 93
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 atatttaggaacggagggagta 175
||||||||||||||||||||||
Sbjct: 227 atatttaggaacggagggagta 248
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 154 atatttaggaacggagggagta 175
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 154 atatttaggaacggagggagta 175
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 atatttaggaacggagggagta 175
||||||||||||||||||||||
Sbjct: 219 atatttaggaacggagggagta 240
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 154 atatttaggaacggagggagta 175
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 154 atatttaggaacggagggagta 175
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
||||||||| ||||||||||||||||
Sbjct: 94 cttatattttggaacggagggagtat 119
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
||||||||| ||||||||||||||||
Sbjct: 129 cttatattttggaacggagggagtat 154
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 150 acttatatttaggaacggagggagta 175
|||||||||| |||||||||||||||
Sbjct: 30 acttatattttggaacggagggagta 5
>RF00906;MIR1122;CT030168.3/87017-87173 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggagggagtat 176
||||||||||| ||||||||||||||
Sbjct: 29 cttatatttagaaacggagggagtat 4
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
||||||||||| ||||||||||||||
Sbjct: 129 cttatatttagaaacggagggagtat 154
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
||||||||| ||||||||||||||||
Sbjct: 127 cttatattttggaacggagggagtat 152
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 tatttaggaacggagggagtat 176
||||||||||||||||||||||
Sbjct: 70 tatttaggaacggagggagtat 91
>RF00906;MIR1122;AACV01003381.1/5259-5104 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtat 4
>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 128 cttatatttagggacggagggagtat 153
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtat 4
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 113 cttatatttagggacggagggagtat 138
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 103 cttatatttagggacggagggagtat 128
>RF00906;MIR1122;AP005896.3/119867-120022 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtat 4
>RF00906;MIR1122;AACV01013612.1/22689-22534 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 128 cttatatttagggacggagggagtat 153
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 acttatatttaggaacggagggagta 175
||||||||||||| ||||||||||||
Sbjct: 105 acttatatttagggacggagggagta 130
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 112 cttatatttagggacggagggagtat 137
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 93 cttatatttagggacggagggagtat 118
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 103 cttatatttagggacggagggagtat 128
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtat 4
>RF00906;MIR1122;AC087851.4/84630-84468 4530:Oryza sativa (rice)
Length = 163
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 151 cttatatttaggaacggagggagtat 176
|||||||||||| |||||||||||||
Sbjct: 135 cttatatttagggacggagggagtat 160
