miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 206 bits (104), Expect = 9e-53
Identities = 149/164 (90%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
|||||||||||||||||||||||||||||| |||| ||||| || ||||||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacgg 105
Query: 79 atgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcct 138
||||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||| ||
Sbjct: 104 atgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatct 45
Query: 139 aatgaaatatcttaaaagacttatatttacgaacggagggagta 182
| |||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 44 agtgaaatcgcttaaaagacttatatttaggaacggagggagta 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
|||||||||||||||||||||||||||||| ||| | ||||| ||| | ||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 79 a 79
|
Sbjct: 61 a 61
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 153 aaagacttatatttacgaacggagggagta 182
||||||||||||||| ||||||||||||||
Sbjct: 135 aaagacttatatttaggaacggagggagta 164
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 182 bits (92), Expect = 1e-45
Identities = 146/164 (89%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
|||||||||||||||||||||||||||||| |||||||||| |||| |||||||| |||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 60
Query: 79 atgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcct 138
||||||||||||||| |||||| | ||||||||||||||||||||| ||||| | | ||
Sbjct: 61 atgtatatagacatattttagaatatagattcactcattttgctccgtatgtagtcgtct 120
Query: 139 aatgaaatatcttaaaagacttatatttacgaacggagggagta 182
| ||||| ||| |||||||||||||||| ||||||||||||||
Sbjct: 121 agcgaaatctctaaaaagacttatatttaggaacggagggagta 164
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
|||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 105
Query: 79 a 79
|
Sbjct: 104 a 104
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 152 aaaagacttatatttacgaacggagggagta 182
|||||||||||||||| ||||||||||||||
Sbjct: 31 aaaagacttatatttaggaacggagggagta 1
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 167 bits (84), Expect = 7e-41
Identities = 145/164 (88%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
|||||||||||||||||||||||||||||| ||| |||||| ||| |||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106
Query: 79 atgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcct 138
|||||||||||||||| ||||||| |||||||||||||||||||| ||||| | | | |
Sbjct: 105 atgtatatagacatac-ttagagtacagattcactcattttgctccatatgtagcccctt 47
Query: 139 aatgaaatatcttaaaagacttatatttacgaacggagggagta 182
| ||||| ||| |||||||||| ||||| ||||||||||||||
Sbjct: 46 agagaaatctctaaaaagacttacatttaggaacggagggagta 3
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataagtcttt 48
||||||||||||||||||||| |||||||||
Sbjct: 2 atactccctccgttcctaaatgtaagtcttt 32
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 152 aaaagacttatatttacgaacggagggagta 182
|||||||||||||||| ||||||||||||||
Sbjct: 135 aaaagacttatatttaggaacggagggagta 165
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 161 bits (81), Expect = 5e-39
Identities = 141/165 (85%), Gaps = 17/165 (10%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacg 77
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 4 atactccctccgttcctaaatataagtctttaaagaagtttcattagtggactatatacg 63
Query: 78 gatgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcc 137
|||||||||||||||| |||||||||||||| ||||| |||| |
Sbjct: 64 gatgtatatagacata-----------------actcattttgctccgtatgtagactac 106
Query: 138 taatgaaatatcttaaaagacttatatttacgaacggagggagta 182
|| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 107 tagtgaaatatcttaaaagacttatatttaggaacggagggagta 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacg 77
||||||||||||||||||||||||||||||| |||| ||||| |||| | |||||||||
Sbjct: 152 atactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacg 93
Query: 78 ga 79
||
Sbjct: 92 ga 91
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 137 ctaatgaaatatcttaaaagacttatatttacgaacggagggagta 182
||||||||| |||| ||||||||||||||| ||||||||||||||
Sbjct: 50 ctaatgaaacttctttaaagacttatatttaggaacggagggagta 5
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 149 bits (75), Expect = 2e-35
Identities = 146/167 (87%), Gaps = 2/167 (1%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacg 77
||||||||||||||||||||||||||||||| |||| ||| | || |||||||||||||
Sbjct: 167 atactccctccgttcctaaatataagtctttttagagatttgaata-tggactacatacg 109
Query: 78 gatgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcc 137
|||| |||||||| || |||||||||||||||||||||||||||||| ||||| | | |
Sbjct: 108 gatgaatatagacgtattttagagtgtagattcactcattttgctccgtatgtagtc-ca 50
Query: 138 taatgaaatatcttaaaagacttatatttacgaacggagggagtact 184
|| | ||| ||| |||||||||||||||| |||| |||||||||||
Sbjct: 49 tattagaatctctaaaaagacttatatttaggaacagagggagtact 3
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 143 aaatatcttaaaagacttatatttacgaacggagggagta 182
|||| ||| |||||||||||||||| ||||||||||||||
Sbjct: 127 aaatctctaaaaagacttatatttaggaacggagggagta 166
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatataagtcttt 48
||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctctgttcctaaatataagtcttt 34
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 127 bits (64), Expect = 6e-29
Identities = 140/164 (85%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
||||||||||||||||||||||||| | || |||| || | || | |||||||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagattgtacta-taaactacatacgg 59
Query: 79 atgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcct 138
||||| ||||||||| |||||||| ||||||||||||||||||||| ||||| | |||||
Sbjct: 60 atgtacatagacatattttagagtatagattcactcattttgctccgtatgtagtctcct 119
Query: 139 aatgaaatatcttaaaagacttatatttacgaacggagggagta 182
| ||||||| || ||| | ||||||||| ||||||||||||||
Sbjct: 120 agtgaaatacctaaaaggtcttatattttggaacggagggagta 163
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
|||||||||||||||| |||||||||
Sbjct: 164 atactccctccgttccaaaatataag 139
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 119 bits (60), Expect = 2e-26
Identities = 140/164 (85%), Gaps = 2/164 (1%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
|||||||||| ||||||||||||||||||| |||| ||||| || ||||| ||||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcacta-tggaccacatacgg 105
Query: 79 atgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcct 138
|||||| |||| | |||||||| ||| |||||||||||| |||| ||||||| | | |
Sbjct: 104 atgtatgtagatgcattttagagtataggttcactcattttactccgtatgtggtc-cat 46
Query: 139 aatgaaatatcttaaaagacttatatttacgaacggagggagta 182
|||||||| | | ||||||||||||||| ||||||||||||||
Sbjct: 45 aatgaaatctgtccaaagacttatatttaggaacggagggagta 2
Score = 67.9 bits (34), Expect = 5e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacg 77
||||||||||||||||||||||||||||||| | || |||||||| ||||| |||||||
Sbjct: 1 atactccctccgttcctaaatataagtctttggacagatttcatta-tggaccacatacg 59
Query: 78 ga 79
||
Sbjct: 60 ga 61
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 153 aaagacttatatttacgaacggagggagtac 183
||||||||||||||| ||| |||||||||||
Sbjct: 134 aaagacttatatttaggaatggagggagtac 164
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 111 bits (56), Expect = 4e-24
Identities = 140/164 (85%), Gaps = 3/164 (1%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
||||||||||||||||||||||||||||| ||| ||||| | |||||| ||||||||
Sbjct: 165 tactccctccgttcctaaatataagtcttcgtagatatttcact-gtggaccacatacgg 107
Query: 79 atgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcct 138
||||||||||| | |||| ||||||||||||||||||| |||| ||||||| || |
Sbjct: 106 atgtatatagatgcattttat-gtgtagattcactcatttttctccgtatgtggtcta-t 49
Query: 139 aatgaaatatcttaaaagacttatatttacgaacggagggagta 182
| |||||| ||| ||||||||||||||| ||||||||||||||
Sbjct: 48 agtgaaatctctccaaagacttatatttaggaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatataagtcttt 48
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 141 tgaaatatcttaaaagacttatatttacgaacggagggagtact 184
|||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 124 tgaaatatctacgaagacttatatttaggaacggagggagtact 167
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 111 bits (56), Expect = 4e-24
Identities = 138/164 (84%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
||||||||||||||||||||||||| | || |||| || | || | |||||||||||
Sbjct: 4 tactccctccgttcctaaatataagaccttttagagattgtacta-taaactacatacgg 62
Query: 79 atgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcct 138
||||| ||||||||| |||||||| ||||||| ||||||||||||| ||||| | || ||
Sbjct: 63 atgtacatagacatattttagagtatagattcgctcattttgctccgtatgtagtcttct 122
Query: 139 aatgaaatatcttaaaagacttatatttacgaacggagggagta 182
| ||||||| || ||| | ||||||||| ||||||||||||||
Sbjct: 123 agtgaaatacctaaaaggtcttatattttggaacggagggagta 166
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 89.7 bits (45), Expect = 1e-17
Identities = 137/165 (83%), Gaps = 7/165 (4%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
|||||||||||||||||||||||||||||| |||| || || || ||||| |||||
Sbjct: 5 tactccctccgttcctaaatataagtctttgtagagattccacta-tggaccacata--- 60
Query: 79 atgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcct 138
||||||||| | |||||||||||||||||||||||||||| | ||||| | | | |
Sbjct: 61 --gtatatagatgcattttagagtgtagattcactcattttgcttcgtatgtagtc-cat 117
Query: 139 aatgaaatatcttaaaagacttatatttacgaacggagggagtac 183
| |||||| ||| | ||||||||||||| |||||||||||||||
Sbjct: 118 agtgaaatctctacagagacttatatttaggaacggagggagtac 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacg 77
|||||||||||||||||||||||||||| | |||| ||||| || |||||||||||||
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcacta-tggactacatacg 104
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 153 aaagacttatatttacgaacggagggagta 182
||||||||||||||| ||||||||||||||
Sbjct: 34 aaagacttatatttaggaacggagggagta 5
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 115 attttgctccttatgtggactcctaatgaaatatcttaaaagacttatatttacgaacgg 174
|||||||||| ||||| ||| |||| ||||||||||||||||||||||||||| | ||||
Sbjct: 72 attttgctccgtatgtagacacctagtgaaatatcttaaaagacttatatttaagtacgg 13
Query: 175 agggagta 182
||||||||
Sbjct: 12 agggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataagtcttt 48
|||||||||||||||||||||||||||||||
Sbjct: 139 atactccctccgttcctaaatataagtcttt 109
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacg 77
||||||||||||| | ||||||||||||||| |||| ||||| ||| | |||||||||
Sbjct: 4 atactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacg 63
Query: 78 ga 79
||
Sbjct: 64 ga 65
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 153 aaagacttatatttacgaacggagggagta 182
||||||||||||||| ||||||||||||||
Sbjct: 109 aaagacttatatttaggaacggagggagta 138
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 79.8 bits (40), Expect = 1e-14
Identities = 135/164 (82%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacgg 78
||||||||||||||||||||||||| | || |||| | ||| || | |||||||||||
Sbjct: 2 tactccctccgttcctaaatataagaccttttagagatctcacta-taaactacatacgg 60
Query: 79 atgtatatagacatactttagagtgtagattcactcattttgctccttatgtggactcct 138
|||||| ||| |||| ||| | |||| |||||||||||||||||| ||||| | || |
Sbjct: 61 atgtatgtagtcatattttgggatgtaaattcactcattttgctccgtatgtagtct-at 119
Query: 139 aatgaaatatcttaaaagacttatatttacgaacggagggagta 182
| |||||| | | ||| | |||||||||| ||||||||||||||
Sbjct: 120 agtgaaatttgtaaaaggtcttatatttaggaacggagggagta 163
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatataag 43
|||||||||||||||||||||||||
Sbjct: 163 tactccctccgttcctaaatataag 139
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 67.9 bits (34), Expect = 5e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacg 77
||||||||||||||||||||||||||||||| |||| || || || |||||||||||||
Sbjct: 4 atactccctccgttcctaaatataagtctttttagagattacacta-tggactacatacg 62
Query: 78 ga 79
||
Sbjct: 63 ga 64
Score = 67.9 bits (34), Expect = 5e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 105 agattcactcattttgctccttatgtggactcctaatgaaatatcttaaaagacttatat 164
|||||||||||||||||||| ||||| | | | || || ||| ||| |||||||||||||
Sbjct: 81 agattcactcattttgctccgtatgtagtc-catagtgtaatctctaaaaagacttatat 23
Query: 165 ttacgaacggagggagta 182
||| ||||||||||||||
Sbjct: 22 ttaggaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 ccctccgttcctaaatataagtc 45
|||||||||||||||||||||||
Sbjct: 111 ccctccgttcctaaatataagtc 89
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 60.0 bits (30), Expect = 1e-08
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataagtctttaaagaggtttcattagtggactacatacg 77
|||||||||||||||||||||||||| | || || || || || || ||||||||||
Sbjct: 167 atactccctccgttcctaaatataagaccttttaggtattacacta-tgaactacatacg 109
Query: 78 gatgtatatagacatactttag 99
|||||||||||||||| |||||
Sbjct: 108 gatgtatatagacatattttag 87
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatataag 43
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataagtcttt 48
||||||||||| |||||||||||||||||||
Sbjct: 4 atactccctcctttcctaaatataagtcttt 34
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 153 aaagacttatatttacgaacggagggagta 182
||||||||||||||| ||| ||||||||||
Sbjct: 34 aaagacttatatttaggaaaggagggagta 5
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataa 42
|||||||||||||||||||||||||
Sbjct: 116 atactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatataag 43
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataag 43
|||||||||| |||||||||||||||
Sbjct: 4 atactccctctgttcctaaatataag 29
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 158 cttatatttacgaacggagggagtac 183
|||||||||| |||||||||||||||
Sbjct: 52 cttatatttaggaacggagggagtac 77
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatataag 43
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatata 41
||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatata 27
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 actccctccgttcctaaatataag 43
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatat 40
|||||||||||||||||||||||
Sbjct: 239 atactccctccgttcctaaatat 217
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatat 40
|||||||||||||||||||||||
Sbjct: 1 atactccctccgttcctaaatat 23
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatata 41
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;AACV01008275.1/11041-11180 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 atgatactccctccgttcctaaatata 41
||||||||||||||||||| |||||||
Sbjct: 1 atgatactccctccgttccaaaatata 27
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataagt 44
|||||| ||||||||||||||||||||
Sbjct: 147 atactcactccgttcctaaatataagt 121
>RF00906;MIR1122;AC087851.4/84630-84468 4530:Oryza sativa (rice)
Length = 163
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 17 gatactccctccgttcctaaatataag 43
|||||||||||||| ||||||||||||
Sbjct: 161 gatactccctccgtccctaaatataag 135
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatat 40
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatat 40
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatat 40
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatat 40
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatat 40
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatat 40
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
|||||||||||||||| |||||||||
Sbjct: 119 atactccctccgttccaaaatataag 94
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
|||||||||||||||| |||||||||
Sbjct: 154 atactccctccgttccaaaatataag 129
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 tactccctccgttcctaaatataagt 44
||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgttccaaaatataagt 30
>RF00906;MIR1122;CT030168.3/87017-87173 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataag 43
|||||||||||||| |||||||||||
Sbjct: 4 atactccctccgtttctaaatataag 29
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
|||||||||||||| |||||||||||
Sbjct: 154 atactccctccgtttctaaatataag 129
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
|||||||||||||||| |||||||||
Sbjct: 152 atactccctccgttccaaaatataag 127
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaata 39
||||||||||||||||||||||
Sbjct: 91 atactccctccgttcctaaata 70
>RF00906;MIR1122;AACV01003381.1/5259-5104 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 153 atactccctccgtccctaaatataag 128
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 138 atactccctccgtccctaaatataag 113
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 128 atactccctccgtccctaaatataag 103
>RF00906;MIR1122;AP005896.3/119867-120022 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01013612.1/22689-22534 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 153 atactccctccgtccctaaatataag 128
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 tactccctccgttcctaaatataagt 44
|||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 137 atactccctccgtccctaaatataag 112
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 118 atactccctccgtccctaaatataag 93
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
|||||||||||||||| |||||||||
Sbjct: 92 atactccctccgttccaaaatataag 67
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 128 atactccctccgtccctaaatataag 103
>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 152 atactccctccgtccctaaatataag 127
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 atactccctccgttcctaaatataag 43
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
