miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 165

 Score =  159 bits (80), Expect = 2e-38
 Identities = 117/128 (91%), Gaps = 1/128 (0%)
 Strand = Plus / Plus

                                                                       
Query: 16  tactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcg 75
           ||||||||||||||||||||||||||||||||| ||||||||||||   |||||||| ||
Sbjct: 1   tactccctccgttcctaaatataagtcttttaa-gcgatttcactagatgtctacatacg 59

                                                                       
Query: 76  gagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagtccac 135
           ||||||||||||||||| || ||| |||| ||||||||||||||||||||| ||||||| 
Sbjct: 60  gagcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtccat 119

                   
Query: 136 tagtgaaa 143
           ||||||||
Sbjct: 120 tagtgaaa 127



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 16  tactccctccgttcctaaatataagtcttt 45
           ||||||||||||||||||||||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtcttt 135




>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
          Length = 166

 Score =  127 bits (64), Expect = 6e-29
 Identities = 113/128 (88%), Gaps = 1/128 (0%)
 Strand = Plus / Minus

                                                                       
Query: 16  tactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcg 75
           ||||||||||||||||||||||||||||||| | | |||||| |||   | |||||| ||
Sbjct: 164 tactccctccgttcctaaatataagtcttttta-gagatttcgctagacgactacatacg 106

                                                                       
Query: 76  gagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagtccac 135
           ||||||||||| |||||||||| | ||||||||||||||||||||||| || ||||| ||
Sbjct: 105 gagcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctac 46

                   
Query: 136 tagtgaaa 143
           ||||||||
Sbjct: 45  tagtgaaa 38



 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 16 tactccctccgttcctaaatataagtctttt 46
          |||||||||||||||||||||||||||||||
Sbjct: 1  tactccctccgttcctaaatataagtctttt 31




>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
          Length = 165

 Score =  123 bits (62), Expect = 9e-28
 Identities = 115/130 (88%), Gaps = 2/130 (1%)
 Strand = Plus / Plus

                                                                       
Query: 14  aatactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatg 73
           |||||||||||||||||||||| |||||||||| | | |||||| ||||||| |||||| 
Sbjct: 1   aatactccctccgttcctaaatgtaagtcttttta-gagatttctctaaggggctacata 59

                                                                       
Query: 74  cggagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagtcc 133
            |||||||||||| ||||||| |||| |||  ||||||||||||||||||||| ||||||
Sbjct: 60  tggagcaaaatgagtgaatctgtactctaag-tatgtctatatacatccgtatgtagtcc 118

                     
Query: 134 actagtgaaa 143
            |||||||||
Sbjct: 119 cctagtgaaa 128



 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                          
Query: 16  tactccctccgttcctaaatataagtctttt 46
           |||||||||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttt 135




>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
          Length = 165

 Score =  105 bits (53), Expect = 2e-22
 Identities = 102/117 (87%), Gaps = 1/117 (0%)
 Strand = Plus / Minus

                                                                       
Query: 15  atactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgc 74
           |||||||||||||||| ||||||||| | ||| | |  ||||||||| | | |||||| |
Sbjct: 164 atactccctccgttccaaaatataagaccttttaggt-atttcactaggagactacatac 106

                                                                    
Query: 75  ggagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagt 131
           |||||||||||| |||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 105 ggagcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagt 49



 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tactccctccgttcctaaatataag 40
          |||||||||||||||||||||||||
Sbjct: 1  tactccctccgttcctaaatataag 25




>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 166

 Score = 87.7 bits (44), Expect = 5e-17
 Identities = 99/116 (85%), Gaps = 1/116 (0%)
 Strand = Plus / Minus

                                                                       
Query: 16  tactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcg 75
           ||||||||||||||| ||||||||| | ||| | |  |||||||||   | |||||| ||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggt-atttcactagaagactacatacg 108

                                                                   
Query: 76  gagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagt 131
           |||||||||||  ||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 107 gagcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt 52



 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tactccctccgttcctaaatataag 40
          |||||||||||||||||||||||||
Sbjct: 4  tactccctccgttcctaaatataag 28




>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
          Length = 167

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 102/119 (85%), Gaps = 2/119 (1%)
 Strand = Plus / Plus

                                                                       
Query: 16  tactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcg 75
           ||||||||| ||||||||||||||||||||| | | ||||  | || ||  |||||| ||
Sbjct: 5   tactccctctgttcctaaatataagtcttttta-gagattctaatatgga-ctacatacg 62

                                                                      
Query: 76  gagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagtcca 134
           ||||||||||| |||||||| ||| ||||||| |||||||| ||||||||| |||||||
Sbjct: 63  gagcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtcca 121



 Score = 63.9 bits (32), Expect = 7e-10
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                           
Query: 15  atactccctccgttcctaaatataagtctttt 46
           ||||||||||||||||||||||||||||||||
Sbjct: 167 atactccctccgttcctaaatataagtctttt 136




>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 155

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 65/72 (90%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                       
Query: 15  atactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgc 74
           |||||||||||||||||||||||||||||||| |||  |||||||||   |||||||| |
Sbjct: 152 atactccctccgttcctaaatataagtctttt-aagatatttcactagtagtctacatac 94

                       
Query: 75  ggagcaaaatga 86
           ||||||||||||
Sbjct: 93  ggagcaaaatga 82



 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 15 atactccctccgttcctaaatataagtcttt 45
          |||||||||||||||||||||||||||||||
Sbjct: 4  atactccctccgttcctaaatataagtcttt 34



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 106 tatgtctatatacatccgtatctagtccactagtgaaa 143
           ||||||||||||||||||||| |||||||||| |||||
Sbjct: 79  tatgtctatatacatccgtatatagtccactaatgaaa 42




>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 119

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 71/80 (88%), Gaps = 2/80 (2%)
 Strand = Plus / Plus

                                                                      
Query: 15 atactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgc 74
          ||||||||||||||||||||||||||||||||  || |||| |||| | || |||||| |
Sbjct: 4  atactccctccgttcctaaatataagtctttt-tagagattacact-atggactacatac 61

                              
Query: 75 ggagcaaaatgattgaatct 94
          |||||||||||| |||||||
Sbjct: 62 ggagcaaaatgagtgaatct 81



 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 20  ccctccgttcctaaatataagtc 42
           |||||||||||||||||||||||
Sbjct: 111 ccctccgttcctaaatataagtc 89




>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
          vulgare (domesticated barley)
          Length = 142

 Score = 67.9 bits (34), Expect = 5e-11
 Identities = 62/70 (88%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                      
Query: 15 atactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgc 74
          ||||||||||||| | |||||||||||||||| |||  ||||||||| | |||||||| |
Sbjct: 4  atactccctccgtacttaaatataagtctttt-aagatatttcactaggtgtctacatac 62

                    
Query: 75 ggagcaaaat 84
          ||||||||||
Sbjct: 63 ggagcaaaat 72



 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                          
Query: 15  atactccctccgttcctaaatataagtcttt 45
           |||||||||||||||||||||||||||||||
Sbjct: 139 atactccctccgttcctaaatataagtcttt 109




>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum
          (bread wheat)
          Length = 167

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 15 atactccctccgttcctaaatataagtcttt 45
          |||||||||||||||||||||||||||||||
Sbjct: 1  atactccctccgttcctaaatataagtcttt 31



 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 16  tactccctccgttcctaaatataagtcttt 45
           |||||||||| |||||||||||||||||||
Sbjct: 163 tactccctccattcctaaatataagtcttt 134




>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
          Length = 165

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 78/91 (85%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                       
Query: 16  tactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcg 75
           ||||||||||||||||||||||||||| | |  || ||||||||| | || |||||| ||
Sbjct: 161 tactccctccgttcctaaatataagtc-tctgtagagatttcact-atggactacatacg 104

                                          
Query: 76  gagcaaaatgattgaatctatactttaaaat 106
            |||||||||| |||||||| ||| ||||||
Sbjct: 103 aagcaaaatgagtgaatctacactctaaaat 73



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 16 tactccctccgttcctaaatataagtcttt 45
          ||||||||||||||||||||||||||||||
Sbjct: 5  tactccctccgttcctaaatataagtcttt 34




>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
          subsp. dicoccoides
          Length = 167

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 16 tactccctccgttcctaaatataagtcttt 45
          ||||||||||||||||||||||||||||||
Sbjct: 5  tactccctccgttcctaaatataagtcttt 34



 Score = 58.0 bits (29), Expect = 5e-08
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 16  tactccctccgttcctaaatataagtctt 44
           |||||||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctt 137




>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
          Length = 107

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 14 aatactccctccgttcctaaatataagtcttt 45
          |||||||||||| |||||||||||||||||||
Sbjct: 3  aatactccctcctttcctaaatataagtcttt 34




>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
          Length = 167

 Score = 54.0 bits (27), Expect = 7e-07
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 101 taaaatatgtctatatacatccgtatctagt 131
           |||||||||||||||||||||||||| ||||
Sbjct: 88  taaaatatgtctatatacatccgtatgtagt 118



 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 15  atactccctccgttcctaaatataag 40
           ||||||||||||||||||||||||||
Sbjct: 167 atactccctccgttcctaaatataag 142



 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tactccctccgttcctaaatataag 40
          |||||||||||||||||||||||||
Sbjct: 5  tactccctccgttcctaaatataag 29




>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
          Japonica Group
          Length = 119

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 atactccctccgttcctaaatataag 40
          ||||||||||||||||||||||||||
Sbjct: 4  atactccctccgttcctaaatataag 29




>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 167

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tactccctccgttcctaaatataag 40
          |||||||||||||||||||||||||
Sbjct: 2  tactccctccgttcctaaatataag 26



 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 16  tactccctccgttcctaaatataag 40
           |||||||||||||||||||||||||
Sbjct: 163 tactccctccgttcctaaatataag 139




>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
           Japonica Group
          Length = 119

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 15  atactccctccgttcctaaatataa 39
           |||||||||||||||||||||||||
Sbjct: 116 atactccctccgttcctaaatataa 92




>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
          Japonica Group
          Length = 80

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 16 tactccctccgttcctaaatataag 40
          |||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52



 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 15 atactccctccgttcctaaatataag 40
          |||||||||| |||||||||||||||
Sbjct: 4  atactccctctgttcctaaatataag 29




>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa
          Japonica Group
          Length = 132

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 12 aaaatactccctccgttcctaaatataag 40
          |||||||||||||||| ||||||||||||
Sbjct: 1  aaaatactccctccgtccctaaatataag 29




>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
          Japonica Group
          Length = 157

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tactccctccgttcctaaatataag 40
          |||||||||||||||||||||||||
Sbjct: 5  tactccctccgttcctaaatataag 29




>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
          Indica Group
          Length = 138

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 15 atactccctccgttcctaaatata 38
          ||||||||||||||||||||||||
Sbjct: 4  atactccctccgttcctaaatata 27




>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
          Japonica Group
          Length = 102

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 17 actccctccgttcctaaatataag 40
          ||||||||||||||||||||||||
Sbjct: 6  actccctccgttcctaaatataag 29




>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
           Japonica Group
          Length = 239

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 15  atactccctccgttcctaaatat 37
           |||||||||||||||||||||||
Sbjct: 239 atactccctccgttcctaaatat 217




>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
          Japonica Group
          Length = 247

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 atactccctccgttcctaaatat 37
          |||||||||||||||||||||||
Sbjct: 1  atactccctccgttcctaaatat 23




>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
           (barrel medic)
          Length = 157

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 14  aatactccctccgttcctaaatataag 40
           ||||||||||||||||| |||||||||
Sbjct: 155 aatactccctccgttccaaaatataag 129




>RF00906;MIR1122;CT030168.3/87017-87173 3880:Medicago truncatula
           (barrel medic)
          Length = 157

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 14  aatactccctccgttcctaaatataag 40
           ||||||||||||||| |||||||||||
Sbjct: 155 aatactccctccgtttctaaatataag 129



 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 15 atactccctccgttcctaaatataag 40
          |||||||||||||| |||||||||||
Sbjct: 4  atactccctccgtttctaaatataag 29




>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
           (barrel medic)
          Length = 155

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 14  aatactccctccgttcctaaatataag 40
           ||||||||||||||||| |||||||||
Sbjct: 153 aatactccctccgttccaaaatataag 127




>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
          Length = 93

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 16 tactccctccgttcctaaatata 38
          |||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67




>RF00906;MIR1122;AACV01003381.1/5259-5104 39947:Oryza sativa
          Japonica Group
          Length = 156

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 14 aatactccctccgttcctaaatataag 40
          |||||||||||||| ||||||||||||
Sbjct: 3  aatactccctccgtccctaaatataag 29




>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
           Group
          Length = 156

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 14  aatactccctccgttcctaaatataag 40
           |||||||||||||| ||||||||||||
Sbjct: 154 aatactccctccgtccctaaatataag 128




>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
          Japonica Group
          Length = 156

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 14 aatactccctccgttcctaaatataag 40
          |||||||||||||| ||||||||||||
Sbjct: 3  aatactccctccgtccctaaatataag 29




>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
           Indica Group
          Length = 131

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 14  aatactccctccgttcctaaatataag 40
           |||||||||||||| ||||||||||||
Sbjct: 129 aatactccctccgtccctaaatataag 103




>RF00906;MIR1122;AP005896.3/119867-120022 39947:Oryza sativa
          Japonica Group
          Length = 156

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 14 aatactccctccgttcctaaatataag 40
          |||||||||||||| ||||||||||||
Sbjct: 3  aatactccctccgtccctaaatataag 29




>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
           Indica Group
          Length = 150

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 15  atactccctccgttcctaaatataagt 41
           |||||| ||||||||||||||||||||
Sbjct: 147 atactcactccgttcctaaatataagt 121




>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
           Group
          Length = 131

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 14  aatactccctccgttcctaaatataag 40
           |||||||||||||| ||||||||||||
Sbjct: 129 aatactccctccgtccctaaatataag 103




>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
           Group
          Length = 249

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 16  tactccctccgttcctaaatat 37
           ||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227




>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
          Group
          Length = 224

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tactccctccgttcctaaatat 37
          ||||||||||||||||||||||
Sbjct: 2  tactccctccgttcctaaatat 23




>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
          Group
          Length = 241

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tactccctccgttcctaaatat 37
          ||||||||||||||||||||||
Sbjct: 2  tactccctccgttcctaaatat 23




>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
           Japonica Group
          Length = 241

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 16  tactccctccgttcctaaatat 37
           ||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219




>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
          Group
          Length = 244

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tactccctccgttcctaaatat 37
          ||||||||||||||||||||||
Sbjct: 2  tactccctccgttcctaaatat 23




>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
          Length = 238

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tactccctccgttcctaaatat 37
          ||||||||||||||||||||||
Sbjct: 2  tactccctccgttcctaaatat 23




>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
           (barrel medic)
          Length = 122

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 15  atactccctccgttcctaaatataag 40
           |||||||||||||||| |||||||||
Sbjct: 119 atactccctccgttccaaaatataag 94




>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
          (barrel medic)
          Length = 145

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 16 tactccctccgttcctaaatataagt 41
          ||||||||||||||| ||||||||||
Sbjct: 5  tactccctccgttccaaaatataagt 30




>RF00906;MIR1122;AF459639.1/32480-32388 4568:Triticum monococcum
          Length = 93

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 13 aaatactccctccgttcctaaatata 38
          |||||||||||| |||||||||||||
Sbjct: 2  aaatactccctcagttcctaaatata 27




>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
          distachyon
          Length = 94

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 15 atactccctccgttcctaaata 36
          ||||||||||||||||||||||
Sbjct: 91 atactccctccgttcctaaata 70




>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
           Indica Group
          Length = 141

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 15  atactccctccgttcctaaatataag 40
           ||||||||||||| ||||||||||||
Sbjct: 138 atactccctccgtccctaaatataag 113




>RF00906;MIR1122;AACV01013612.1/22689-22534 39947:Oryza sativa
           Japonica Group
          Length = 156

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 15  atactccctccgttcctaaatataag 40
           ||||||||||||| ||||||||||||
Sbjct: 153 atactccctccgtccctaaatataag 128




>RF00906;MIR1122;AP008217.1/6469174-6469304 39947:Oryza sativa
          Japonica Group
          Length = 131

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 14 aatactccctccgttcctaaatataa 39
          ||||||||||| ||||||||||||||
Sbjct: 3  aatactccctctgttcctaaatataa 28




>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
           Japonica Group
          Length = 134

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 16  tactccctccgttcctaaatataagt 41
           |||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105




>RF00906;MIR1122;AACV01008813.1/4556-4689 39947:Oryza sativa
          Japonica Group
          Length = 134

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 13 aaatactccctccgttcctaaatata 38
          |||||||||||||||||| |||||||
Sbjct: 2  aaatactccctccgttccaaaatata 27




>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
           Japonica Group
          Length = 140

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 15  atactccctccgttcctaaatataag 40
           ||||||||||||| ||||||||||||
Sbjct: 137 atactccctccgtccctaaatataag 112




>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
           Indica Group
          Length = 121

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 15  atactccctccgttcctaaatataag 40
           ||||||||||||| ||||||||||||
Sbjct: 118 atactccctccgtccctaaatataag 93




>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
          Japonica Group
          Length = 95

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 15 atactccctccgttcctaaatataag 40
          |||||||||||||||| |||||||||
Sbjct: 92 atactccctccgttccaaaatataag 67




>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
           Japonica Group
          Length = 155

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 15  atactccctccgttcctaaatataag 40
           ||||||||||||| ||||||||||||
Sbjct: 152 atactccctccgtccctaaatataag 127




>RF00906;MIR1122;AC087851.4/84630-84468 4530:Oryza sativa (rice)
          Length = 163

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 15  atactccctccgttcctaaatataag 40
           ||||||||||||| ||||||||||||
Sbjct: 160 atactccctccgtccctaaatataag 135