miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 159 bits (80), Expect = 2e-38
Identities = 117/128 (91%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcg 75
||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaa-gcgatttcactagatgtctacatacg 59
Query: 76 gagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagtccac 135
||||||||||||||||| || ||| |||| ||||||||||||||||||||| |||||||
Sbjct: 60 gagcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtccat 119
Query: 136 tagtgaaa 143
||||||||
Sbjct: 120 tagtgaaa 127
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtcttt 45
||||||||||||||||||||||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtcttt 135
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 127 bits (64), Expect = 6e-29
Identities = 113/128 (88%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcg 75
||||||||||||||||||||||||||||||| | | |||||| ||| | |||||| ||
Sbjct: 164 tactccctccgttcctaaatataagtcttttta-gagatttcgctagacgactacatacg 106
Query: 76 gagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagtccac 135
||||||||||| |||||||||| | ||||||||||||||||||||||| || ||||| ||
Sbjct: 105 gagcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctac 46
Query: 136 tagtgaaa 143
||||||||
Sbjct: 45 tagtgaaa 38
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttt 46
|||||||||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtctttt 31
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 123 bits (62), Expect = 9e-28
Identities = 115/130 (88%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 14 aatactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatg 73
|||||||||||||||||||||| |||||||||| | | |||||| ||||||| ||||||
Sbjct: 1 aatactccctccgttcctaaatgtaagtcttttta-gagatttctctaaggggctacata 59
Query: 74 cggagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagtcc 133
|||||||||||| ||||||| |||| ||| ||||||||||||||||||||| ||||||
Sbjct: 60 tggagcaaaatgagtgaatctgtactctaag-tatgtctatatacatccgtatgtagtcc 118
Query: 134 actagtgaaa 143
|||||||||
Sbjct: 119 cctagtgaaa 128
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttt 46
|||||||||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttt 135
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 105 bits (53), Expect = 2e-22
Identities = 102/117 (87%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgc 74
|||||||||||||||| ||||||||| | ||| | | ||||||||| | | |||||| |
Sbjct: 164 atactccctccgttccaaaatataagaccttttaggt-atttcactaggagactacatac 106
Query: 75 ggagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagt 131
|||||||||||| |||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 105 ggagcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagt 49
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataag 25
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 87.7 bits (44), Expect = 5e-17
Identities = 99/116 (85%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcg 75
||||||||||||||| ||||||||| | ||| | | ||||||||| | |||||| ||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggt-atttcactagaagactacatacg 108
Query: 76 gagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagt 131
||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 107 gagcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt 52
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 4 tactccctccgttcctaaatataag 28
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 85.7 bits (43), Expect = 2e-16
Identities = 102/119 (85%), Gaps = 2/119 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcg 75
||||||||| ||||||||||||||||||||| | | |||| | || || |||||| ||
Sbjct: 5 tactccctctgttcctaaatataagtcttttta-gagattctaatatgga-ctacatacg 62
Query: 76 gagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatctagtcca 134
||||||||||| |||||||| ||| ||||||| |||||||| ||||||||| |||||||
Sbjct: 63 gagcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtcca 121
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagtctttt 46
||||||||||||||||||||||||||||||||
Sbjct: 167 atactccctccgttcctaaatataagtctttt 136
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgc 74
|||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| |
Sbjct: 152 atactccctccgttcctaaatataagtctttt-aagatatttcactagtagtctacatac 94
Query: 75 ggagcaaaatga 86
||||||||||||
Sbjct: 93 ggagcaaaatga 82
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtcttt 45
|||||||||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatataagtcttt 34
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 106 tatgtctatatacatccgtatctagtccactagtgaaa 143
||||||||||||||||||||| |||||||||| |||||
Sbjct: 79 tatgtctatatacatccgtatatagtccactaatgaaa 42
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 71.9 bits (36), Expect = 3e-12
Identities = 71/80 (88%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgc 74
|||||||||||||||||||||||||||||||| || |||| |||| | || |||||| |
Sbjct: 4 atactccctccgttcctaaatataagtctttt-tagagattacact-atggactacatac 61
Query: 75 ggagcaaaatgattgaatct 94
|||||||||||| |||||||
Sbjct: 62 ggagcaaaatgagtgaatct 81
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 20 ccctccgttcctaaatataagtc 42
|||||||||||||||||||||||
Sbjct: 111 ccctccgttcctaaatataagtc 89
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 67.9 bits (34), Expect = 5e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgc 74
||||||||||||| | |||||||||||||||| ||| ||||||||| | |||||||| |
Sbjct: 4 atactccctccgtacttaaatataagtctttt-aagatatttcactaggtgtctacatac 62
Query: 75 ggagcaaaat 84
||||||||||
Sbjct: 63 ggagcaaaat 72
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagtcttt 45
|||||||||||||||||||||||||||||||
Sbjct: 139 atactccctccgttcctaaatataagtcttt 109
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum
(bread wheat)
Length = 167
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtcttt 45
|||||||||||||||||||||||||||||||
Sbjct: 1 atactccctccgttcctaaatataagtcttt 31
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtcttt 45
|||||||||| |||||||||||||||||||
Sbjct: 163 tactccctccattcctaaatataagtcttt 134
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 61.9 bits (31), Expect = 3e-09
Identities = 78/91 (85%), Gaps = 2/91 (2%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcg 75
||||||||||||||||||||||||||| | | || ||||||||| | || |||||| ||
Sbjct: 161 tactccctccgttcctaaatataagtc-tctgtagagatttcact-atggactacatacg 104
Query: 76 gagcaaaatgattgaatctatactttaaaat 106
|||||||||| |||||||| ||| ||||||
Sbjct: 103 aagcaaaatgagtgaatctacactctaaaat 73
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtcttt 45
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtcttt 45
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
Score = 58.0 bits (29), Expect = 5e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctt 44
|||||||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctt 137
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 14 aatactccctccgttcctaaatataagtcttt 45
|||||||||||| |||||||||||||||||||
Sbjct: 3 aatactccctcctttcctaaatataagtcttt 34
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 101 taaaatatgtctatatacatccgtatctagt 131
|||||||||||||||||||||||||| ||||
Sbjct: 88 taaaatatgtctatatacatccgtatgtagt 118
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||||||||||||||||
Sbjct: 167 atactccctccgttcctaaatataag 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatataag 29
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatataag 26
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 163 tactccctccgttcctaaatataag 139
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataa 39
|||||||||||||||||||||||||
Sbjct: 116 atactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataag 40
|||||||||| |||||||||||||||
Sbjct: 4 atactccctctgttcctaaatataag 29
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa
Japonica Group
Length = 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 12 aaaatactccctccgttcctaaatataag 40
|||||||||||||||| ||||||||||||
Sbjct: 1 aaaatactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatata 38
||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatata 27
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 actccctccgttcctaaatataag 40
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatat 37
|||||||||||||||||||||||
Sbjct: 239 atactccctccgttcctaaatat 217
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatat 37
|||||||||||||||||||||||
Sbjct: 1 atactccctccgttcctaaatat 23
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 aatactccctccgttcctaaatataag 40
||||||||||||||||| |||||||||
Sbjct: 155 aatactccctccgttccaaaatataag 129
>RF00906;MIR1122;CT030168.3/87017-87173 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 aatactccctccgttcctaaatataag 40
||||||||||||||| |||||||||||
Sbjct: 155 aatactccctccgtttctaaatataag 129
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataag 40
|||||||||||||| |||||||||||
Sbjct: 4 atactccctccgtttctaaatataag 29
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 aatactccctccgttcctaaatataag 40
||||||||||||||||| |||||||||
Sbjct: 153 aatactccctccgttccaaaatataag 127
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatata 38
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;AACV01003381.1/5259-5104 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 aatactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 3 aatactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 aatactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 154 aatactccctccgtccctaaatataag 128
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 aatactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 3 aatactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 aatactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 129 aatactccctccgtccctaaatataag 103
>RF00906;MIR1122;AP005896.3/119867-120022 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 aatactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 3 aatactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagt 41
|||||| ||||||||||||||||||||
Sbjct: 147 atactcactccgttcctaaatataagt 121
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 aatactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 129 aatactccctccgtccctaaatataag 103
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
|||||||||||||||| |||||||||
Sbjct: 119 atactccctccgttccaaaatataag 94
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagt 41
||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgttccaaaatataagt 30
>RF00906;MIR1122;AF459639.1/32480-32388 4568:Triticum monococcum
Length = 93
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 aaatactccctccgttcctaaatata 38
|||||||||||| |||||||||||||
Sbjct: 2 aaatactccctcagttcctaaatata 27
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaata 36
||||||||||||||||||||||
Sbjct: 91 atactccctccgttcctaaata 70
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 138 atactccctccgtccctaaatataag 113
>RF00906;MIR1122;AACV01013612.1/22689-22534 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 153 atactccctccgtccctaaatataag 128
>RF00906;MIR1122;AP008217.1/6469174-6469304 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 aatactccctccgttcctaaatataa 39
||||||||||| ||||||||||||||
Sbjct: 3 aatactccctctgttcctaaatataa 28
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagt 41
|||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105
>RF00906;MIR1122;AACV01008813.1/4556-4689 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 aaatactccctccgttcctaaatata 38
|||||||||||||||||| |||||||
Sbjct: 2 aaatactccctccgttccaaaatata 27
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 137 atactccctccgtccctaaatataag 112
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 118 atactccctccgtccctaaatataag 93
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
|||||||||||||||| |||||||||
Sbjct: 92 atactccctccgttccaaaatataag 67
>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 152 atactccctccgtccctaaatataag 127
>RF00906;MIR1122;AC087851.4/84630-84468 4530:Oryza sativa (rice)
Length = 163
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 160 atactccctccgtccctaaatataag 135