miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 188 bits (95), Expect = 2e-47
Identities = 146/163 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacataagg 71
||||||||||||||| ||||||||||||||||| |||| |||||||||||||||| ||
Sbjct: 163 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 104
Query: 72 aacaaaatgagtgaatctatattttaaaatatgtctatatacatccctatgtagttcata 131
| ||||||||||||||||||| | |||||||||||||| ||||||| ||||||||| |||
Sbjct: 103 agcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagtttata 44
Query: 132 atacaatgtctaaaaggtcttatatttaagaatggagagagta 174
|||||| |||||||||||||||||||| ||| |||| |||||
Sbjct: 43 gtacaatctctaaaaggtcttatatttaggaacggagggagta 1
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttacta 56
||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagattgtacta 45
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 172 bits (87), Expect = 1e-42
Identities = 144/163 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacataagg 71
||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||| ||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 72 aacaaaatgagtgaatctatattttaaaatatgtctatatacatccctatgtagttcata 131
| ||||||||| ||||||||| | |||||||||||||| ||||||| ||||||||| |||
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagtttata 47
Query: 132 atacaatgtctaaaaggtcttatatttaagaatggagagagta 174
|||||| |||||||||||||||||||| ||| |||| |||||
Sbjct: 46 gtacaatctctaaaaggtcttatatttaggaacggagggagta 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttacta 56
||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 4 tactccctccgttcctaaatataagaccttttagagattgtacta 48
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 133 bits (67), Expect = 9e-31
Identities = 140/163 (85%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacataagg 71
||||||||||||||||||||||||||||||||| | ||| ||||| | ||||||||| ||
Sbjct: 5 tactccctccgttcctaaatataagaccttttagaaattctactatg-gactacatacgg 63
Query: 72 aacaaaatgagtgaatctatattttaaaatatgtctatatacatccctatgtagttcata 131
||||||| | | || ||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 64 aacaaaacaaataaacctataccctaaaatatgtctatatacatccgtatgtagttcata 123
Query: 132 atacaatgtctaaaaggtcttatatttaagaatggagagagta 174
| ||| ||||||||||||||||||| ||| |||| |||||
Sbjct: 124 gtgtaatacctaaaaggtcttatatttaggaacggagggagta 166
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagacctttta 44
|||||||||||||||||||||||||||||||||
Sbjct: 166 tactccctccgttcctaaatataagacctttta 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 119 tatgtagttcataatacaatgtctaaaaggtcttatatttaagaatggagagagta 174
|||||||| |||| || ||| |||||||||||||||||||| ||| |||| |||||
Sbjct: 60 tatgtagtccatagtagaatttctaaaaggtcttatatttaggaacggagggagta 5
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 133 bits (67), Expect = 9e-31
Identities = 103/115 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacataagg 71
||||||||||||||||||||||||| | ||||| |||||| |||| ||||||||| ||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 105
Query: 72 aacaaaatgagtgaatctatattttaaaatatgtctatatacatccctatgtagt 126
| ||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 104 agcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagt 50
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacat 67
||||||||||||||||||||||||| | ||||| || ||| ||||| |||||||||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacat 56
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 125 bits (63), Expect = 2e-28
Identities = 139/163 (85%), Gaps = 1/163 (0%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacataagg 71
||||||||||||||||||||||||||||||||| | |||| |||| |||||||||| ||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttcacta-tagactacatacgg 105
Query: 72 aacaaaatgagtgaatctatattttaaaatatgtctatatacatccctatgtagttcata 131
| |||||||||||||| || || |||||||| ||| |||||||| ||||||||| |||
Sbjct: 104 agcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagtttata 45
Query: 132 atacaatgtctaaaaggtcttatatttaagaatggagagagta 174
| || |||||||||||||||||||| ||| |||| |||||
Sbjct: 44 gtgagatctctaaaaggtcttatatttaggaacggagggagta 2
Score = 67.9 bits (34), Expect = 5e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagaccttttaaagat 49
||||||||||||||||||||||||||||||||| ||||
Sbjct: 2 tactccctccgttcctaaatataagaccttttagagat 39
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 111 bits (56), Expect = 3e-24
Identities = 138/164 (84%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 11 gtactccctccgttcctaaatataagaccttttaaagattttactaggagactacataag 70
|||||||||| ||||||||||||||| | ||||| ||||| || || | ||||||||| |
Sbjct: 4 gtactccctctgttcctaaatataagtctttttagagattctaatatg-gactacatacg 62
Query: 71 gaacaaaatgagtgaatctatattttaaaatatgtctatatacatccctatgtagttcat 130
|| ||||||||||||||||| | | ||||||| |||||||| ||||| |||||||| |||
Sbjct: 63 gagcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtccat 122
Query: 131 aatacaatgtctaaaaggtcttatatttaagaatggagagagta 174
| | ||| ||||||| | |||||||||| ||| |||| |||||
Sbjct: 123 attcaaatctctaaaaagacttatatttaggaacggagggagta 166
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattt 51
||||||||||||||||||||||||| | ||||| ||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagattt 127
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 85.7 bits (43), Expect = 2e-16
Identities = 98/115 (85%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacataagg 71
|||||||||||||||||||| |||| | ||||| |||||| ||| | | ||||||| ||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62
Query: 72 aacaaaatgagtgaatctatattttaaaatatgtctatatacatccctatgtagt 126
| |||||||||||||||| || | | || ||||||||||||||||| ||||||||
Sbjct: 63 agcaaaatgagtgaatctgtactct-aagtatgtctatatacatccgtatgtagt 116
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacata 68
||||||||||||||||||||||||| | ||||| | ||| |||||| |||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacata 109
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 85.7 bits (43), Expect = 2e-16
Identities = 97/115 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacataagg 71
||||||||||||||||||||||||| | ||| | ||||| ||||| | ||||||| ||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 72 aacaaaatgagtgaatctatattttaaaatatgtctatatacatccctatgtagt 126
| |||||||| ||||| || | | |||| ||||||||||||||||| ||||||||
Sbjct: 61 agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagt 115
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 164 tactccctccgttcctaaatataag 140
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 75.8 bits (38), Expect = 2e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacataagg 71
||||||||||||||||||||||||| | ||||| ||||| |||| | ||||||||| ||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacactatg-gactacatacgg 63
Query: 72 aacaaaatgagtgaatct 89
| ||||||||||||||||
Sbjct: 64 agcaaaatgagtgaatct 81
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 8 catgtactccctccgttcctaaatataagaccttttaaagatt 50
||||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 119 catgtaccccctccgttcctaaatataagtccttttagagatt 77
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 67.9 bits (34), Expect = 5e-11
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 9 atgtactccctccgttcctaaatataagaccttttaaagattttactaggagactacata 68
|||||||||||||||||||||||||||| | | || |||||| |||| | |||||||||
Sbjct: 164 atgtactccctccgttcctaaatataagtctctgtagagatttcactatg-gactacata 106
Query: 69 aggaacaaaatgagtgaatcta 90
| | |||||||||||||||||
Sbjct: 105 cgaagcaaaatgagtgaatcta 84
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 65.9 bits (33), Expect = 2e-10
Identities = 133/165 (80%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacataagg 71
||||||||||||||||||||||||| | || | |||||| | || | ||| ||||| ||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttcattatg-gaccacatacgg 60
Query: 72 aacaaaatgagtgaatctatattttaaaatatgtctatatacatccctatgtagttcata 131
| |||||||||||| ||||| | |||||| |||| |||||||| ||||| || ||||
Sbjct: 61 agtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtccata 120
Query: 132 atacaatgtctaaaaggtcttatatttaagaatggagagagtaca 176
| ||| |||| || | |||||||||| |||||||| |||||||
Sbjct: 121 gtgaaatctctacaaagacttatatttaggaatggagggagtaca 165
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 tgtactccctccgttcctaaatataag 36
|||||||||||| ||||||||||||||
Sbjct: 165 tgtactccctccattcctaaatataag 139
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacataagg 71
||||||||||||||||||||||||| | ||| | | |||| ||||| || ||||||| ||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 72 aacaaaatgagt 83
| ||||||||||
Sbjct: 91 agcaaaatgagt 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 54.0 bits (27), Expect = 7e-07
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttactaggagactacataagg 71
||||||||||||||||||||||||| | || | |||||| |||| |||| ||||| ||
Sbjct: 5 tactccctccgttcctaaatataagtctttggagagatttcacta-tagaccacatacgg 63
Query: 72 aacaaaatgagtgaatcta 90
| ||||||||||||||||
Sbjct: 64 agaaaaatgagtgaatcta 82
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 gtactccctccgttcctaaatataag 36
||||||||||||||||||||||||||
Sbjct: 166 gtactccctccgttcctaaatataag 141
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 11 gtactccctccgttcctaaatataaga 37
|||||||||||||||||||||||||||
Sbjct: 77 gtactccctccgttcctaaatataaga 51
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 10 tgtactccctccgttcctaaatataagacctttt 43
||||||||||||||||||||||||| ||| ||||
Sbjct: 91 tgtactccctccgttcctaaatatatgacgtttt 58
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagaccttttaaagattttacta 56
|||||||||| |||||||||||||| | || ||||||||| ||||
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcacta 49
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataag 114
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataaga 37
|||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataaga 30
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 atgtactccctccgttcctaaata 32
||||||||||||||||||||||||
Sbjct: 103 atgtactccctccgttcctaaata 80
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataa 35
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 gtactccctccgttcctaaatat 33
|||||||||||||||||||||||
Sbjct: 249 gtactccctccgttcctaaatat 227
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 gtactccctccgttcctaaatat 33
|||||||||||||||||||||||
Sbjct: 241 gtactccctccgttcctaaatat 219
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 gtactccctccgttcctaaatat 33
|||||||||||||||||||||||
Sbjct: 1 gtactccctccgttcctaaatat 23
>RF00906;MIR1122;AAAA02031042.1/16213-16344 39946:Oryza sativa
Indica Group
Length = 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 atgtactccctccgttcctaaatataa 35
||||||||||||||| |||||||||||
Sbjct: 2 atgtactccctccgtccctaaatataa 28
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 tgtactccctccgttcctaaatataag 36
|||||||||||||| ||||||||||||
Sbjct: 132 tgtactccctccgtccctaaatataag 106
>RF00906;MIR1122;AAAA02001165.1/17166-17008 39946:Oryza sativa
Indica Group
Length = 159
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 gtactccctccgttcctaaatataaga 37
||||||||||||| |||||||||||||
Sbjct: 156 gtactccctccgtccctaaatataaga 130
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatata 34
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 gtactccctccgttcctaaatataaga 37
||||||||||||| |||||||||||||
Sbjct: 128 gtactccctccgtccctaaatataaga 102
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;ABXC01001510.1/32715-32871 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 10 tgtactccctccgttcctaaatataagacctttt 43
||||||||||||||||| || |||||||| ||||
Sbjct: 155 tgtactccctccgttccaaactataagacgtttt 122
>RF00906;MIR1122;EU730901.1/155966-155873 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 gtactccctccgttcctaaata 32
||||||||||||||||||||||
Sbjct: 4 gtactccctccgttcctaaata 25
>RF00906;MIR1122;AAAA02004745.1/46871-46769 39946:Oryza sativa
Indica Group
Length = 103
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 ccctccgttcctaaatataaga 37
||||||||||||||||||||||
Sbjct: 95 ccctccgttcctaaatataaga 74
>RF00906;MIR1122;DQ454157.1/29550-29395 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataaga 37
|||||||||||| |||||||||||||
Sbjct: 152 tactccctccgtccctaaatataaga 127
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataaga 37
|||||||||||| |||||||||||||
Sbjct: 127 tactccctccgtccctaaatataaga 102
>RF00906;MIR1122;AACV01001639.1/6893-7021 39947:Oryza sativa
Japonica Group
Length = 129
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataaga 37
|||||||||||| |||||||||||||
Sbjct: 125 tactccctccgtccctaaatataaga 100
>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 tgtactccctccgttcctaaatataa 35
|||||||||||||| |||||||||||
Sbjct: 115 tgtactccctccgtccctaaatataa 90
>RF00906;MIR1122;AAAA02002822.1/13589-13717 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataaga 37
|||||||||||| |||||||||||||
Sbjct: 125 tactccctccgtccctaaatataaga 100
>RF00906;MIR1122;AP008217.1/6469174-6469304 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 gtactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 128 gtactccctccgtccctaaatataag 103
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa Japonica
Group
Length = 121
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataaga 37
|||||||||||| |||||||||||||
Sbjct: 117 tactccctccgtccctaaatataaga 92
>RF00906;MIR1122;AACV01000871.1/13756-13601 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 gtactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 153 gtactccctccgtccctaaatataag 128
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataaga 37
|||||||||||| |||||||||||||
Sbjct: 136 tactccctccgtccctaaatataaga 111
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 gtactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataaga 37
|||||||||||| |||||||||||||
Sbjct: 127 tactccctccgtccctaaatataaga 102
>RF00906;MIR1122;AP008207.1/11769320-11769475 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 gtactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtccctaaatataag 29
