miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 178 bits (90), Expect = 2e-44
Identities = 147/165 (89%), Gaps = 2/165 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagaccttttagaaattacattataagcttcatacgga 75
||||||||||||||||||||||||||||||||||| ||| | ||||| || ||||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagattgtactataaactacatacgga 60
Query: 76 tgtacatagacatattttataatgtataaattcactcattttgctccgtatgtagttttc 135
||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| | |
Sbjct: 61 tgtacatagacatattttaga--gtatagattcactcattttgctccgtatgtagtctcc 118
Query: 136 tagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 180
|||||||| |||||||||||||||||| ||||| || ||||||
Sbjct: 119 tagtgaaatacctaaaaggtcttatattttggaacggagggagta 163
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagaccttttag 49
||||||||||||||| ||||||||||||||||||
Sbjct: 163 tactccctccgttccaaaatataagaccttttag 130
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 120 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 179
|||||||||||||| |||| || |||||||||||||||||||||||||| || |||||
Sbjct: 60 tccgtatgtagttta-tagtacaatctctaaaaggtcttatatttaggaacggagggagt 2
Query: 180 a 180
|
Sbjct: 1 a 1
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 178 bits (90), Expect = 2e-44
Identities = 147/165 (89%), Gaps = 2/165 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagaccttttagaaattacattataagcttcatacgga 75
||||||||||||||||||||||||||||||||||| ||| | ||||| || ||||||||
Sbjct: 4 tactccctccgttcctaaatataagaccttttagagattgtactataaactacatacgga 63
Query: 76 tgtacatagacatattttataatgtataaattcactcattttgctccgtatgtagttttc 135
||||||||||||||||||| | ||||| |||| |||||||||||||||||||||| |||
Sbjct: 64 tgtacatagacatattttaga--gtatagattcgctcattttgctccgtatgtagtcttc 121
Query: 136 tagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 180
|||||||| |||||||||||||||||| ||||| || ||||||
Sbjct: 122 tagtgaaatacctaaaaggtcttatattttggaacggagggagta 166
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagaccttttag 49
||||||||||||||| ||||||||||||||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttag 133
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 120 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 179
|||||||||||||| |||| || |||||||||||||||||||||||||| || |||||
Sbjct: 63 tccgtatgtagttta-tagtacaatctctaaaaggtcttatatttaggaacggagggagt 5
Query: 180 a 180
|
Sbjct: 4 a 4
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 139 bits (70), Expect = 2e-32
Identities = 143/165 (86%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagaccttttagaaattacattataagcttcatacgga 75
||||||||||||||||||||||||||||||||||| || || ||||| || ||||||||
Sbjct: 2 tactccctccgttcctaaatataagaccttttagagatctcactataaactacatacgga 61
Query: 76 tgtacatagacatattttataatgtataaattcactcattttgctccgtatgtagttttc 135
|||| ||| |||||||| ||| ||||||||||||||||||||||||||||| | |
Sbjct: 62 tgtatgtagtcatattttgggatg--taaattcactcattttgctccgtatgtag-tcta 118
Query: 136 tagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 180
|||||||| | ||||||||||||||||||||||| || ||||||
Sbjct: 119 tagtgaaatttgtaaaaggtcttatatttaggaacggagggagta 163
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagaccttttagaaattacattataagcttcatacgga 75
||||||||||||||||||||||||||||||||| ||||| || |||| || ||||||||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttcactatagactacatacgga 104
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 120 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 179
|||||||||||||| |||||| | |||||||||||||||||||||||||| || |||||
Sbjct: 61 tccgtatgtagttta-tagtgagatctctaaaaggtcttatatttaggaacggagggagt 3
Query: 180 a 180
|
Sbjct: 2 a 2
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 125 bits (63), Expect = 2e-28
Identities = 142/166 (85%), Gaps = 3/166 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagaccttttagaaattacattataag-cttcatacgg 74
||||||||||||||||||||||||| | ||||||| || || || || || ||| |||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 60
Query: 75 atgtacatagacatattttataatgtataaattcactcattttgctccgtatgtagtttt 134
||||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||| |
Sbjct: 61 atgtatatagacatattttagaat--atagattcactcattttgctccgtatgtagtcgt 118
Query: 135 ctagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 180
|||| |||| |||||||| | ||||||||||||||| || ||||||
Sbjct: 119 ctagcgaaatctctaaaaagacttatatttaggaacggagggagta 164
Score = 58.0 bits (29), Expect = 5e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 120 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 179
|||| ||||||| | ||||||||| |||||||| | ||||||||||||||| || |||||
Sbjct: 61 tccgaatgtagtctactagtgaaacctctaaaaagacttatatttaggaacggagggagt 2
Query: 180 a 180
|
Sbjct: 1 a 1
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagaccttttaga 50
||||||||||||||||||||||||| | |||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttttaga 130
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 101 bits (51), Expect = 4e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagaccttttagaaattacattataagcttcatacgga 75
|||||||||||||||||||||||||||||||||| |||||| ||| | || ||||||||
Sbjct: 166 tactccctccgttcctaaatataagaccttttaggtattacactatgaactacatacgga 107
Query: 76 tgtacatagacatatttta 94
|||| ||||||||||||||
Sbjct: 106 tgtatatagacatatttta 88
Score = 77.8 bits (39), Expect = 5e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagaccttttagaaatt 54
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagaccttttagaaatt 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 147 ctaaaaggtcttatatttaggaaccgatggagta 180
|||||||||||||||||||||||| || ||||||
Sbjct: 133 ctaaaaggtcttatatttaggaacggagggagta 166
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 85.7 bits (43), Expect = 2e-16
Identities = 137/166 (82%), Gaps = 3/166 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagaccttttagaaattacattataag-cttcatacgg 74
||||||||||||||||||||||||| | || |||| ||| || || | || |||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacgg 105
Query: 75 atgtacatagacatattttataatgtataaattcactcattttgctccgtatgtagtttt 134
||||| ||||||||| |||| | |||| | |||| |||||||||||||||||||| |
Sbjct: 104 atgtatatagacatactttagagtgtaca--ttcaatcattttgctccgtatgtagacat 47
Query: 135 ctagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 180
||||||||| | || ||| | ||||||||||||||| || ||||||
Sbjct: 46 ctagtgaaatcgcttaaaagacttatatttaggaacggagggagta 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataag 25
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 81.8 bits (41), Expect = 3e-15
Identities = 98/116 (84%), Gaps = 2/116 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagaccttttagaaattacattataagcttcatacgga 75
||||||||||||||||||||||||| | ||||||| ||| | ||| || ||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagatttgaatatggactacatacgga 107
Query: 76 tgtacatagacatattttataatgtataaattcactcattttgctccgtatgtagt 131
|| | |||||| ||||||| | |||| | ||||||||||||||||||||||||||
Sbjct: 106 tgaatatagacgtattttagagtgtaga--ttcactcattttgctccgtatgtagt 53
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 14 agtactccctccgttcctaaatataagaccttttaga 50
||||||||||| ||||||||||||||| | |||||||
Sbjct: 3 agtactccctctgttcctaaatataagtctttttaga 39
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 63.9 bits (32), Expect = 8e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 109 actcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttagga 168
|||||||||||||||||||||| | ||||||||| ||| ||| | |||||||||||||
Sbjct: 80 actcattttgctccgtatgtagactactagtgaaatatcttaaaagacttatatttagga 139
Query: 169 accgatggagta 180
|| || ||||||
Sbjct: 140 acggagggagta 151
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 151 tactccctccgttcctaaatataag 127
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 63.9 bits (32), Expect = 8e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 105 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 164
||||||||||||||||||||||||||| ||||| || |||||||| | |||||||||
Sbjct: 79 attcactcattttgctccgtatgtagtcca-tagtgtaatctctaaaaagacttatattt 21
Query: 165 aggaaccgatggagta 180
|||||| || ||||||
Sbjct: 20 aggaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagaccttttagaaattaca 57
||||||||||||||||||||||||| | ||||||| ||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattaca 46
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 15 gtactccctccgttcctaaatataagaccttttaga 50
|||| ||||||||||||||||||||| |||||||||
Sbjct: 116 gtaccccctccgttcctaaatataagtccttttaga 81
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 145 ctctaaaaggtcttatatttaggaac 170
|||||||||| |||||||||||||||
Sbjct: 80 ctctaaaaggacttatatttaggaac 105
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 63.9 bits (32), Expect = 8e-10
Identities = 134/166 (80%), Gaps = 4/166 (2%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagaccttttagaaattacattataag-cttcatacgg 74
||||||||||||||||||||||||| | |||||||| || || || | || |||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106
Query: 75 atgtacatagacatattttataatgtataaattcactcattttgctccgtatgtagtttt 134
||||| ||||||||| | || ||| | |||||||||||||||||| |||||||
Sbjct: 105 atgtatatagacatact---tagagtacagattcactcattttgctccatatgtagcccc 49
Query: 135 ctagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 180
||| |||| |||||||| | |||| |||||||||| || ||||||
Sbjct: 48 ttagagaaatctctaaaaagacttacatttaggaacggagggagta 3
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 120 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 179
|||||||||||| ||||||||| ||||||| | ||||||||||||||| || |||||
Sbjct: 105 tccgtatgtagtcccctagtgaaacttctaaaaagacttatatttaggaacggagggagt 164
Query: 180 a 180
|
Sbjct: 165 a 165
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagaccttttaga 50
|||||||||||||||||||| |||| | |||||||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttaga 37
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 14 agtactccctccgttcctaaatataag 40
|||||||||||||||||||||||||||
Sbjct: 167 agtactccctccgttcctaaatataag 141
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 15 gtactccctccgttcctaaatataaga 41
|||||||||||||||||||||||||||
Sbjct: 77 gtactccctccgttcctaaatataaga 51
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 52.0 bits (26), Expect = 3e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 105 attcactcattttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 164
|||||||||||||||| |||||||||| |||||||| ||||| | | |||||||||
Sbjct: 87 attcactcattttgcttcgtatgtagtcca-tagtgaaatctctacagagacttatattt 145
Query: 165 aggaaccgatggagtaca 182
|||||| || ||||||||
Sbjct: 146 aggaacggagggagtaca 163
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 15 gtactccctccgttcctaaatataag 40
||||||||||||||||||||||||||
Sbjct: 162 gtactccctccgttcctaaatataag 137
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum
(bread wheat)
Length = 167
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatataag 26
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 gtactccctccgttcctaaatataag 40
||||||||||| ||||||||||||||
Sbjct: 164 gtactccctccattcctaaatataag 139
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 15 gtactccctccgttcctaaatataagacctttt 47
|||||||||||||||||||||||| ||| ||||
Sbjct: 90 gtactccctccgttcctaaatatatgacgtttt 58
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataag 114
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 tagtactccctccgttcctaaatataaga 41
||||||||||||||| |||||||||||||
Sbjct: 130 tagtactccctccgtccctaaatataaga 102
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 actccctccgttcctaaatataaga 41
|||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataaga 30
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataa 39
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008217.1/6469174-6469304 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 13 tagtactccctccgttcctaaatataag 40
||||||||||||||| ||||||||||||
Sbjct: 130 tagtactccctccgtccctaaatataag 103
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tagtactccctccgttcctaaatataag 40
||||||||||||||| ||||||||||||
Sbjct: 2 tagtactccctccgtccctaaatataag 29
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 gtactccctccgttcctaaatat 37
|||||||||||||||||||||||
Sbjct: 249 gtactccctccgttcctaaatat 227
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 gtactccctccgttcctaaatat 37
|||||||||||||||||||||||
Sbjct: 241 gtactccctccgttcctaaatat 219
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 gtactccctccgttcctaaatat 37
|||||||||||||||||||||||
Sbjct: 1 gtactccctccgttcctaaatat 23
>RF00906;MIR1122;EU730901.1/155966-155873 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 agtactccctccgttcctaaata 36
|||||||||||||||||||||||
Sbjct: 3 agtactccctccgttcctaaata 25
>RF00906;MIR1122;AP008211.1/1623807-1623936 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 13 tagtactccctccgttcctaaatataa 39
||||||||||||||| |||||||||||
Sbjct: 2 tagtactccctccgtccctaaatataa 28
>RF00906;MIR1122;AAAA02001165.1/17166-17008 39946:Oryza sativa
Indica Group
Length = 159
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 gtactccctccgttcctaaatataaga 41
||||||||||||| |||||||||||||
Sbjct: 156 gtactccctccgtccctaaatataaga 130
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatata 38
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF00906;MIR1122;AAAA02015282.1/385-514 39946:Oryza sativa Indica
Group
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 13 tagtactccctccgttcctaaatataa 39
||||||||||||||| |||||||||||
Sbjct: 129 tagtactccctccgtccctaaatataa 103
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 gtactccctccgttcctaaata 36
||||||||||||||||||||||
Sbjct: 101 gtactccctccgttcctaaata 80
>RF00906;MIR1122;AAAA02004745.1/46871-46769 39946:Oryza sativa
Indica Group
Length = 103
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 20 ccctccgttcctaaatataaga 41
||||||||||||||||||||||
Sbjct: 95 ccctccgttcctaaatataaga 74
>RF00906;MIR1122;DQ454157.1/29550-29395 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataaga 41
|||||||||||| |||||||||||||
Sbjct: 152 tactccctccgtccctaaatataaga 127
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataaga 41
|||||||||||| |||||||||||||
Sbjct: 127 tactccctccgtccctaaatataaga 102
>RF00906;MIR1122;AACV01001639.1/6893-7021 39947:Oryza sativa
Japonica Group
Length = 129
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataaga 41
|||||||||||| |||||||||||||
Sbjct: 125 tactccctccgtccctaaatataaga 100
>RF00906;MIR1122;AAAA02002822.1/13589-13717 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataaga 41
|||||||||||| |||||||||||||
Sbjct: 125 tactccctccgtccctaaatataaga 100
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa Japonica
Group
Length = 121
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataaga 41
|||||||||||| |||||||||||||
Sbjct: 117 tactccctccgtccctaaatataaga 92
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 gtactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 131 gtactccctccgtccctaaatataag 106
>RF00906;MIR1122;AACV01000871.1/13756-13601 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 gtactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 153 gtactccctccgtccctaaatataag 128
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataaga 41
|||||||||||| |||||||||||||
Sbjct: 136 tactccctccgtccctaaatataaga 111
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataaga 41
|||||||||||| |||||||||||||
Sbjct: 127 tactccctccgtccctaaatataaga 102
>RF00906;MIR1122;AP008207.1/11769320-11769475 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 gtactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtccctaaatataag 29
