miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 184 bits (93), Expect = 3e-46
Identities = 147/165 (89%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 72 atcaaaatgagtgaatctacattttaaaatatgtctatatacatccgtacgtagttcatt 131
| |||||||| ||||| |||| | |||| |||||||||||||||||||| ||||| ||||
Sbjct: 61 agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtccatt 120
Query: 132 agtaaaatcgttagaaagacttatatttaggaatagagggagtag 176
||| ||||| || ||||||||||||||||||| ||||||||||
Sbjct: 121 agtgaaatctctacaaagacttatatttaggaacggagggagtag 165
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacgg 105
Query: 72 at 73
||
Sbjct: 104 at 103
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaatagagggagta 175
||||||||||||||||||| |||||||||
Sbjct: 30 aaagacttatatttaggaacggagggagta 1
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 159 bits (80), Expect = 2e-38
Identities = 143/164 (87%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
||||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 105
Query: 72 atcaaaatgagtgaatctacattttaaaatatgtctatatacatccgtacgtagttcatt 131
| ||||||||||||||||| ||| ||||||||||||||||||||||| | ||||| | |
Sbjct: 104 agcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctact 45
Query: 132 agtaaaatcgttagaaagacttatatttaggaatagagggagta 175
||| ||| | || ||||||||||||||||||| |||||||||
Sbjct: 44 agtgaaacctctaaaaagacttatatttaggaacggagggagta 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
||||||||||||||||||||||||||||||| |||| |||||||| | | |||||| |||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 60
Query: 72 at 73
||
Sbjct: 61 at 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 146 aaagacttatatttaggaatagagggagtag 176
||||||||||||||||||| ||||||||||
Sbjct: 135 aaagacttatatttaggaacggagggagtag 165
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 135 bits (68), Expect = 2e-31
Identities = 142/164 (86%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
||||||||| ||||||||||||||||||||| ||||||| | || ||| ||||||||||
Sbjct: 5 tactccctctgttcctaaatataagtctttttagagattctaata-tggactacatacgg 63
Query: 72 atcaaaatgagtgaatctacattttaaaatatgtctatatacatccgtacgtagttcatt 131
| ||||||||||||||||||| | ||||||| |||||||| |||||||| ||||| || |
Sbjct: 64 agcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtcca-t 122
Query: 132 agtaaaatcgttagaaagacttatatttaggaatagagggagta 175
| | ||||| || ||||||||||||||||||| |||||||||
Sbjct: 123 attcaaatctctaaaaagacttatatttaggaacggagggagta 166
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
||||||||||||||||||||||||||||||| |||||||| | | |||| ||||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagatttgaat-atggactacatacgg 108
Query: 72 at 73
||
Sbjct: 107 at 106
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaatagagggagta 175
||||||||||||||||||| ||||||||||
Sbjct: 34 aaagacttatatttaggaacagagggagta 5
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 119 bits (60), Expect = 1e-26
Identities = 139/164 (84%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
|||||||||||||||||||| |||||||||| ||||||||| |||| || ||||||| ||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62
Query: 72 atcaaaatgagtgaatctacattttaaaatatgtctatatacatccgtacgtagttcatt 131
| |||||||||||||||| | | | || |||||||||||||||||||| ||||| | |
Sbjct: 63 agcaaaatgagtgaatctgtactct-aagtatgtctatatacatccgtatgtagtcccct 121
Query: 132 agtaaaatcgttagaaagacttatatttaggaatagagggagta 175
||| ||| || ||||||||||||||||||| |||||||||
Sbjct: 122 agtgaaacttctaaaaagacttatatttaggaacggagggagta 165
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
||||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106
Query: 72 at 73
||
Sbjct: 105 at 104
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 72 atcaaaatgagt 83
| ||||||||||
Sbjct: 91 agcaaaatgagt 80
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
|||||||||||||||||||||||||||||| |||| ||||| || ||| ||| ||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttaaagaagtttcattagtggactatatacgg 64
Query: 72 at 73
||
Sbjct: 65 at 66
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 146 aaagacttatatttaggaatagagggagta 175
||||||||||||||||||| |||||||||
Sbjct: 122 aaagacttatatttaggaacggagggagta 151
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 111 bits (56), Expect = 3e-24
Identities = 138/164 (84%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
||||||||||||||| ||||||||| | ||| || ||||||||| | ||||||||||
Sbjct: 163 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 104
Query: 72 atcaaaatgagtgaatctacattttaaaatatgtctatatacatccgtacgtagttcatt 131
| ||||||||||||||||| | | |||||||||||||| |||||||||| |||||| | |
Sbjct: 103 agcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagttta-t 45
Query: 132 agtaaaatcgttagaaagacttatatttaggaatagagggagta 175
|||| |||| || || | |||||||||||||| |||||||||
Sbjct: 44 agtacaatctctaaaaggtcttatatttaggaacggagggagta 1
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatt 50
||||||||||||||||||||||||| | ||| |||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagatt 39
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 107 bits (54), Expect = 5e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacact-atggactacatacgg 63
Query: 72 atcaaaatgagtgaatct 89
| ||||||||||||||||
Sbjct: 64 agcaaaatgagtgaatct 81
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 16 ccctccgttcctaaatataagtcttttaagagatt 50
||||||||||||||||||||||| ||| |||||||
Sbjct: 111 ccctccgttcctaaatataagtccttttagagatt 77
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaatagagggagta 175
||||||||||||||||||| |||||||||
Sbjct: 34 aaagacttatatttaggaacggagggagta 5
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 107 bits (54), Expect = 5e-23
Identities = 139/166 (83%), Gaps = 1/166 (0%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
||||||||||||||| ||||||||| | ||| || ||||||||| | ||||||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 72 atcaaaatgagtgaatctacattttaaaatatgtctatatacatccgtacgtagttcatt 131
| ||||||||| ||||||| | | |||||||||||||| |||||||||| |||||| | |
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagttta-t 48
Query: 132 agtaaaatcgttagaaagacttatatttaggaatagagggagtagt 177
|||| |||| || || | |||||||||||||| |||||||||||
Sbjct: 47 agtacaatctctaaaaggtcttatatttaggaacggagggagtagt 2
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatt 50
||||||||||||||||||||||||| | ||| |||||||
Sbjct: 4 tactccctccgttcctaaatataagaccttttagagatt 42
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 103 bits (52), Expect = 8e-22
Identities = 138/164 (84%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
|||||||||||||||||||||||||||||| | |||||||| | |||| | ||||||||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttca-ttatggaccacatacgg 60
Query: 72 atcaaaatgagtgaatctacattttaaaatatgtctatatacatccgtacgtagttcatt 131
| |||||||||||| ||| | | |||||| |||| ||||||||||| || || || |
Sbjct: 61 agtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtcca-t 119
Query: 132 agtaaaatcgttagaaagacttatatttaggaatagagggagta 175
||| ||||| || |||||||||||||||||||| |||||||||
Sbjct: 120 agtgaaatctctacaaagacttatatttaggaatggagggagta 163
Score = 67.9 bits (34), Expect = 5e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
|||||||||| ||||||||||||||||||| |||||||||||| |||| | ||||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcact-atggaccacatacgg 105
Query: 72 at 73
||
Sbjct: 104 at 103
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaatagagggagta 175
||||||||||||||||||| |||||||||
Sbjct: 31 aaagacttatatttaggaacggagggagta 2
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 99.6 bits (50), Expect = 1e-20
Identities = 81/90 (90%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
|||||||||||||||||||||||||||| | |||||||||||| |||| |||||||||
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcact-atggactacatacga 103
Query: 72 atcaaaatgagtgaatctacattttaaaat 101
| ||||||||||||||||||| | ||||||
Sbjct: 102 agcaaaatgagtgaatctacactctaaaat 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 10 attactccctccgttcctaaatataagtcttttaagagatttcacta 56
|||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 3 attactccctccgttcctaaatataagtctttgtagagattccacta 49
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 97.6 bits (49), Expect = 5e-20
Identities = 138/165 (83%), Gaps = 2/165 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
||||||||||||||||||||||||| | ||| | | ||||||||| | | ||||||||||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttcacta-tagactacatacgg 105
Query: 72 atcaaaatgagtgaatctacattttaaaatatgtctatatacatccgtacgtagttcatt 131
| |||||||||||||| ||||| |||||||| ||| ||||||||||| |||||| | |
Sbjct: 104 agcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagttta-t 46
Query: 132 agtaaaatcgttagaaagacttatatttaggaatagagggagtag 176
||| | ||| || || | |||||||||||||| ||||||||||
Sbjct: 45 agtgagatctctaaaaggtcttatatttaggaacggagggagtag 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcacta 56
||||||||||||||||||||||||| | ||| |||||| ||||||
Sbjct: 2 tactccctccgttcctaaatataagaccttttagagatctcacta 46
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 89.7 bits (45), Expect = 1e-17
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
|||||||||||||||||||||||||||||| |||||||||||| || | | ||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttggagagatttcact-atagaccacatacgg 63
Query: 72 atcaaaatgagtgaatctaca 92
| ||||||||||||||||||
Sbjct: 64 agaaaaatgagtgaatctaca 84
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtctt 40
|||||||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctt 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 146 aaagacttatatttaggaatagagggagtagt 177
||||||||||||||||||| |||||||||||
Sbjct: 34 aaagacttatatttaggaacggagggagtagt 3
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
|||||||||||| | |||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 5 tactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacgg 64
Query: 72 atcaaaat 79
| ||||||
Sbjct: 65 agcaaaat 72
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
|||||||||||||||||||||||||||||| | ||||| ||||| || ||||||||||
Sbjct: 138 tactccctccgttcctaaatataagtctttcgaaagattcaactaacggactacatacgg 79
Query: 72 at 73
||
Sbjct: 78 at 77
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 114 atccgtacgtagttcattagtaaaatcgttagaaagacttatatttaggaatagagggag 173
||||||| ||||| | ||||| |||| || |||||||||||||||||||| |||||||
Sbjct: 77 atccgtatgtagtccgttagttgaatctttcgaaagacttatatttaggaacggagggag 136
Query: 174 ta 175
||
Sbjct: 137 ta 138
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 77.8 bits (39), Expect = 5e-14
Identities = 100/119 (84%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcactaatggtctacatacgg 71
||||||||||||||||||||||||| | ||| ||| ||| |||| ||| ||||||||||
Sbjct: 5 tactccctccgttcctaaatataagaccttttagaaattctacta-tggactacatacgg 63
Query: 72 atcaaaatgagtgaatctacattttaaaatatgtctatatacatccgtacgtagttcat 130
| ||||| | | || ||| | ||||||||||||||||||||||||| |||||||||
Sbjct: 64 aacaaaacaaataaacctataccctaaaatatgtctatatacatccgtatgtagttcat 122
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 166 tactccctccgttcctaaatataag 142
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 131 tagtaaaatcgttagaaagacttatatttaggaatagagggagta 175
|||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 49 tagtgaaatctttagaaagacttatatttaggaaaggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagtcttttaagagatttcacta 56
|||||||||| ||||||||||||||||||| | |||||||||||
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcacta 49
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataag 36
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 tattactccctccgttcctaaatataag 36
||||||||||||||| ||||||||||||
Sbjct: 155 tattactccctccgtccctaaatataag 128
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataa 35
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 actccctccgttcctaaatataag 36
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ttactccctccgttcctaaatat 33
|||||||||||||||||||||||
Sbjct: 1 ttactccctccgttcctaaatat 23
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ttactccctccgttcctaaatat 33
|||||||||||||||||||||||
Sbjct: 1 ttactccctccgttcctaaatat 23
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ttactccctccgttcctaaatat 33
|||||||||||||||||||||||
Sbjct: 1 ttactccctccgttcctaaatat 23
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatata 34
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa Japonica
Group
Length = 121
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 attactccctccgttcctaaatataag 36
|||||||||||||| ||||||||||||
Sbjct: 119 attactccctccgtccctaaatataag 93
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatata 34
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatat 33
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgttcctaaatataagt 37
||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgttccaaaatataagt 30
>RF00906;MIR1122;DQ454157.1/29550-29395 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ttactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 153 ttactccctccgtccctaaatataag 128
>RF00906;MIR1122;AACV01001639.1/6893-7021 39947:Oryza sativa
Japonica Group
Length = 129
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ttactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 126 ttactccctccgtccctaaatataag 101
>RF00906;MIR1122;AAAA02002822.1/13589-13717 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ttactccctccgttcctaaatataag 36
||||||||||||| ||||||||||||
Sbjct: 126 ttactccctccgtccctaaatataag 101
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagt 37
|||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgttcctaaatataagt 37
||||| ||||||||||||||||||||
Sbjct: 146 tactcactccgttcctaaatataagt 121
