miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 131 bits (66), Expect = 4e-30
Identities = 141/167 (84%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
|||||||||||||||||||||||||||||||||| |||||||||| | ||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 84 aacaaaatgagtgaatctatactttaaagtatgtctaaatacatcagtatgtagtcctat 143
| |||||||| ||||| || ||| ||||||||||||| ||||||| ||||||||||| |
Sbjct: 61 agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtccatt 120
Query: 144 aatgaaacctctnnnnnnnngacttatatttaggaacggagggagta 190
| ||||| |||| |||||||||||||||||||||||||||
Sbjct: 121 agtgaaatctct---acaaagacttatatttaggaacggagggagta 164
Score = 83.8 bits (42), Expect = 9e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatac 81
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatac 107
Score = 54.0 bits (27), Expect = 8e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 164 gacttatatttaggaacggagggagta 190
|||||||||||||||||||||||||||
Sbjct: 27 gacttatatttaggaacggagggagta 1
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 131 bits (66), Expect = 4e-30
Identities = 141/167 (84%), Gaps = 3/167 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 105
Query: 84 aacaaaatgagtgaatctatactttaaagtatgtctaaatacatcagtatgtagtcctat 143
| ||||||||||||||||||| | |||| |||||||| ||||||| | |||||||| |
Sbjct: 104 agcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctact 45
Query: 144 aatgaaacctctnnnnnnnngacttatatttaggaacggagggagta 190
| |||||||||| |||||||||||||||||||||||||||
Sbjct: 44 agtgaaacctct---aaaaagacttatatttaggaacggagggagta 1
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacat 79
||||||||||||||||||||||||||||||| |||| |||||||| |||||||||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacat 56
Score = 54.0 bits (27), Expect = 8e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 164 gacttatatttaggaacggagggagta 190
|||||||||||||||||||||||||||
Sbjct: 138 gacttatatttaggaacggagggagta 164
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 123 bits (62), Expect = 1e-27
Identities = 141/167 (84%), Gaps = 4/167 (2%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
|||||||||||||||||||| |||||||||| ||||||||| ||||| | |||||||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62
Query: 84 aacaaaatgagtgaatctatactttaaagtatgtctaaatacatcagtatgtagtcctat 143
| |||||||||||||||| |||| | ||||||||||| ||||||| ||||||||||| |
Sbjct: 63 agcaaaatgagtgaatctgtactct-aagtatgtctatatacatccgtatgtagtcccct 121
Query: 144 aatgaaacctctnnnnnnnngacttatatttaggaacggagggagta 190
| |||||| ||| |||||||||||||||||||||||||||
Sbjct: 122 agtgaaacttct---aaaaagacttatatttaggaacggagggagta 165
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatac 81
||||||||||||||||||||||||||||||| ||| |||||||| | ||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatac 108
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 164 gacttatatttaggaacggagggagta 190
|||||| ||||||||||||||||||||
Sbjct: 29 gacttacatttaggaacggagggagta 3
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 109 bits (55), Expect = 2e-23
Identities = 100/115 (86%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
||||||||||||||| ||||||||| | ||| || ||||||||| ||||||||||||
Sbjct: 163 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 104
Query: 84 aacaaaatgagtgaatctatactttaaagtatgtctaaatacatcagtatgtagt 138
| ||||||||||||||||||||| |||| |||||||| |||||| |||||||||
Sbjct: 103 agcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagt 49
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatt 62
||||||||||||||||||||||||| | ||| |||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagatt 39
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 101 bits (51), Expect = 4e-21
Identities = 82/91 (90%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 21 atgtactccctccgttcctaaatataagtcttttaagagatttcactaagagactacata 80
||||||||||||||||||||||||||||||| | ||||||||||||| | |||||||||
Sbjct: 164 atgtactccctccgttcctaaatataagtctctgtagagatttcactatg-gactacata 106
Query: 81 caaaacaaaatgagtgaatctatactttaaa 111
| || ||||||||||||||||| ||| ||||
Sbjct: 105 cgaagcaaaatgagtgaatctacactctaaa 75
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcacta 68
|||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 5 tactccctccgttcctaaatataagtctttgtagagattccacta 49
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 164 gacttatatttaggaacggagggagtac 191
||||||||||||||||||||||||||||
Sbjct: 135 gacttatatttaggaacggagggagtac 162
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 93.7 bits (47), Expect = 9e-19
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
||||||||||||||| ||||||||| | ||| || ||||||||| |||||||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 84 aacaaaatgagtgaatctatactttaaagtatgtctaaatacatcagtatgtagt 138
| ||||||||| ||||||||||| |||| |||||||| |||||| |||||||||
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt 52
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatt 62
||||||||||||||||||||||||| | ||| |||||||
Sbjct: 4 tactccctccgttcctaaatataagaccttttagagatt 42
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 93.7 bits (47), Expect = 9e-19
Identities = 139/168 (82%), Gaps = 5/168 (2%)
Strand = Plus / Plus
Query: 23 gtactccctccgttcctaaatataagtcttttaagagatttcactaagagactacataca 82
|||||||||| ||||||||||||||||||||| ||||||| | || | ||||||||||
Sbjct: 4 gtactccctctgttcctaaatataagtctttttagagattctaatatg-gactacatacg 62
Query: 83 aaacaaaatgagtgaatctatactttaaagtatgtctaaatacatcagtatgtagtccta 142
| ||||||||||||||||| ||| |||| || ||||| || |||| ||||||||||| |
Sbjct: 63 gagcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtcc-a 121
Query: 143 taatgaaacctctnnnnnnnngacttatatttaggaacggagggagta 190
|| | ||| |||| |||||||||||||||||||||||||||
Sbjct: 122 tattcaaatctct---aaaaagacttatatttaggaacggagggagta 166
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagagattt 63
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagattt 127
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 164 gacttatatttaggaacggagggagtac 191
||||||||||||||||| ||||||||||
Sbjct: 31 gacttatatttaggaacagagggagtac 4
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 91.7 bits (46), Expect = 4e-18
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacactatg-gactacatacgg 63
Query: 84 aacaaaatgagtgaatct 101
| ||||||||||||||||
Sbjct: 64 agcaaaatgagtgaatct 81
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 21 atgtactccctccgttcctaaatataagtcttttaagagatt 62
|||||| ||||||||||||||||||||||| ||| |||||||
Sbjct: 118 atgtaccccctccgttcctaaatataagtccttttagagatt 77
Score = 54.0 bits (27), Expect = 8e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 164 gacttatatttaggaacggagggagta 190
|||||||||||||||||||||||||||
Sbjct: 31 gacttatatttaggaacggagggagta 5
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 164 gacttatatttaggaacggagggagtac 191
||||||||||||||||||||||| ||||
Sbjct: 89 gacttatatttaggaacggagggggtac 116
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 84 aacaaaatgagt 95
| ||||||||||
Sbjct: 91 agcaaaatgagt 80
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaaga 58
|||||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgttcctaaatataagtctttaaaga 39
Score = 54.0 bits (27), Expect = 8e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 164 gacttatatttaggaacggagggagta 190
|||||||||||||||||||||||||||
Sbjct: 125 gacttatatttaggaacggagggagta 151
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 77.8 bits (39), Expect = 6e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
|||||||||||||||||||||||||||||| |||||||||||| | |||| ||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttggagagatttcact-atagaccacatacgg 63
Query: 84 aacaaaatgagtgaatcta 102
| ||||||||||||||||
Sbjct: 64 agaaaaatgagtgaatcta 82
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataagtctt 52
||||||||||||||||||||||||||||||
Sbjct: 166 gtactccctccgttcctaaatataagtctt 137
Score = 54.0 bits (27), Expect = 8e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 164 gacttatatttaggaacggagggagta 190
|||||||||||||||||||||||||||
Sbjct: 31 gacttatatttaggaacggagggagta 5
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 69.9 bits (35), Expect = 1e-11
Identities = 136/168 (80%), Gaps = 5/168 (2%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
|||||||||||||||||||||||||||||| | |||||||| || | ||| ||||||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttcattatg-gaccacatacgg 60
Query: 84 aacaaaatgagtgaatctatactttaaagtatgtctaaatacatcagtatgtagtcctat 143
| |||||||||||| ||||||| |||| | |||| ||||||| |||||| |||| ||
Sbjct: 61 agtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtcc-at 119
Query: 144 aatgaaacctctnnnnnnnngacttatatttaggaacggagggagtac 191
| ||||| |||| |||||||||||||||| |||||||||||
Sbjct: 120 agtgaaatctct---acaaagacttatatttaggaatggagggagtac 164
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 22 tgtactccctccgttcctaaatataagtcttttaagagatttcacta 68
|||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 165 tgtactccctccattcctaaatataagtctttgtagagatttcacta 119
Score = 54.0 bits (27), Expect = 8e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 164 gacttatatttaggaacggagggagta 190
|||||||||||||||||||||||||||
Sbjct: 28 gacttatatttaggaacggagggagta 2
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatac 81
|||||||||||| | |||||||||||||||||||| ||||||||| | | ||||||||
Sbjct: 5 tactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatac 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttt 53
||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagtcttt 109
Score = 54.0 bits (27), Expect = 8e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 164 gacttatatttaggaacggagggagta 190
|||||||||||||||||||||||||||
Sbjct: 112 gacttatatttaggaacggagggagta 138
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 63.9 bits (32), Expect = 8e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
|||||||||| ||||||||||||||||||| | ||||||||||| | |||||||||| |
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcactacg-gactacatacga 63
Query: 84 aacaaaatgagtgaatctatactt 107
| |||||| ||||| |||||||
Sbjct: 64 agtgaaatgaatgaatttatactt 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 164 gacttatatttaggaacggagggagta 190
|||||||||||||||| ||||||||||
Sbjct: 31 gacttatatttaggaaaggagggagta 5
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 63.9 bits (32), Expect = 8e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
||||||||||||||||||||||||| | ||| | | |||||||| | |||||||||||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttcact-atagactacatacgg 105
Query: 84 aacaaaatgagtgaat 99
| ||||||||||||||
Sbjct: 104 agcaaaatgagtgaat 89
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcacta 68
||||||||||||||||||||||||| | ||| |||||| ||||||
Sbjct: 2 tactccctccgttcctaaatataagaccttttagagatctcacta 46
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 166 cttatatttaggaacggagggagta 190
|||||||||||||||||||||||||
Sbjct: 139 cttatatttaggaacggagggagta 163
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 61.9 bits (31), Expect = 3e-09
Identities = 95/115 (82%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagtcttttaagagatttcactaagagactacatacaa 83
||||||||||||||||||||||||| | ||| ||| ||| |||| | ||||||||||
Sbjct: 5 tactccctccgttcctaaatataagaccttttagaaattctactatg-gactacatacgg 63
Query: 84 aacaaaatgagtgaatctatactttaaagtatgtctaaatacatcagtatgtagt 138
||||||| | | || |||||| |||| |||||||| ||||||| |||||||||
Sbjct: 64 aacaaaacaaataaacctataccctaaaatatgtctatatacatccgtatgtagt 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 166 cttatatttaggaacggagggagta 190
|||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataag 48
|||||||||||||||||||||||||
Sbjct: 166 tactccctccgttcctaaatataag 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 166 cttatatttaggaacggagggagta 190
|||||||||||||||||||||||||
Sbjct: 142 cttatatttaggaacggagggagta 166
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||||||||||||||||
Sbjct: 77 gtactccctccgttcctaaatataag 52
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 166 cttatatttaggaacggagggagtac 191
||||||||||||||||||||||||||
Sbjct: 52 cttatatttaggaacggagggagtac 77
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 20 gatgtactccctccgttcctaaata 44
|||||||||||||||||||||||||
Sbjct: 104 gatgtactccctccgttcctaaata 80
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 170 tatttaggaacggagggagtac 191
||||||||||||||||||||||
Sbjct: 80 tatttaggaacggagggagtac 101
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 22 tgtactccctccgttcctaaatata 46
|||||||||||||||||||||||||
Sbjct: 91 tgtactccctccgttcctaaatata 67
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 168 tatatttaggaacggagggagtac 191
||||||||||||||||||||||||
Sbjct: 67 tatatttaggaacggagggagtac 90
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa Japonica
Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 166 cttatatttaggaacggagggagta 190
|||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataag 48
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 166 cttatatttaggaacggagggagta 190
|||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataag 48
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataa 47
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 167 ttatatttaggaacggagggagta 190
||||||||||||||||||||||||
Sbjct: 92 ttatatttaggaacggagggagta 115
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 tgtactccctccgttcctaaatataagt 49
|||||||||||||| |||||||||||||
Sbjct: 132 tgtactccctccgtccctaaatataagt 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 165 acttatatttaggaacggagggagtac 191
||||||||||||| |||||||||||||
Sbjct: 105 acttatatttagggacggagggagtac 131
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 166 cttatatttaggaacggagggagt 189
||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagt 6
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 actccctccgttcctaaatataag 48
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatat 45
|||||||||||||||||||||||
Sbjct: 249 gtactccctccgttcctaaatat 227
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 atatttaggaacggagggagtac 191
|||||||||||||||||||||||
Sbjct: 227 atatttaggaacggagggagtac 249
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatat 45
|||||||||||||||||||||||
Sbjct: 241 gtactccctccgttcctaaatat 219
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 atatttaggaacggagggagtac 191
|||||||||||||||||||||||
Sbjct: 219 atatttaggaacggagggagtac 241
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 169 atatttaggaacggagggagtac 191
|||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagtac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 gtactccctccgttcctaaatat 45
|||||||||||||||||||||||
Sbjct: 1 gtactccctccgttcctaaatat 23
>RF00906;MIR1122;ABXC01006544.1/387099-387256 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 20 gatgtactccctccgttcctaaatataagtc 50
||||||||||||||||||| || ||||||||
Sbjct: 158 gatgtactccctccgttccaaattataagtc 128
>RF00906;MIR1122;AAAA02031042.1/16213-16344 39946:Oryza sativa
Indica Group
Length = 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 atgtactccctccgttcctaaatataa 47
||||||||||||||| |||||||||||
Sbjct: 2 atgtactccctccgtccctaaatataa 28
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 168 tatatttaggaacggagggagta 190
|||||||||||||||||||||||
Sbjct: 27 tatatttaggaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatata 46
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 169 atatttaggaacggagggagta 190
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 atatttaggaacggagggagta 190
||||||||||||||||||||||
Sbjct: 217 atatttaggaacggagggagta 238
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 169 atatttaggaacggagggagta 190
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 169 atatttaggaacggagggagta 190
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 169 atatttaggaacggagggagta 190
||||||||||||||||||||||
Sbjct: 23 atatttaggaacggagggagta 2
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 165 acttatatttaggaacggagggagta 190
|||||||||| |||||||||||||||
Sbjct: 30 acttatattttggaacggagggagta 5
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatataagt 49
||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgttccaaaatataagt 30
>RF00906;MIR1122;EU730901.1/155966-155873 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 170 tatttaggaacggagggagtac 191
||||||||||||||||||||||
Sbjct: 25 tatttaggaacggagggagtac 4
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 gtactccctccgttcctaaata 44
||||||||||||||||||||||
Sbjct: 4 gtactccctccgttcctaaata 25
>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 tgtactccctccgttcctaaatataa 47
|||||||||||||| |||||||||||
Sbjct: 115 tgtactccctccgtccctaaatataa 90
>RF00906;MIR1122;AP008217.1/6469174-6469304 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 128 gtactccctccgtccctaaatataag 103
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 166 cttatatttaggaacggagggagtac 191
|||||||||||| |||||||||||||
Sbjct: 103 cttatatttagggacggagggagtac 128
>RF00906;MIR1122;AACV01000871.1/13756-13601 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 153 gtactccctccgtccctaaatataag 128
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 166 cttatatttaggaacggagggagtac 191
|||||||||||| |||||||||||||
Sbjct: 128 cttatatttagggacggagggagtac 153
>RF00906;MIR1122;AAAA02001165.1/17166-17008 39946:Oryza sativa
Indica Group
Length = 159
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 156 gtactccctccgtccctaaatataag 131
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 166 cttatatttaggaacggagggagtac 191
|||||||||||| |||||||||||||
Sbjct: 131 cttatatttagggacggagggagtac 156
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatataagt 49
||||| ||||||||||||||||||||
Sbjct: 146 tactcactccgttcctaaatataagt 121
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 165 acttatatttaggaacggagggagta 190
|||||||||||||||||||| |||||
Sbjct: 121 acttatatttaggaacggagtgagta 146
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 128 gtactccctccgtccctaaatataag 103
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 166 cttatatttaggaacggagggagtac 191
|||||||||||| |||||||||||||
Sbjct: 103 cttatatttagggacggagggagtac 128
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 166 cttatatttaggaacggagggagtac 191
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtac 4
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 21 atgtactccctccgttcctaaatataagtctttt 54
||||||||||||||| || |||||||||| ||||
Sbjct: 111 atgtactccctccgtcccaaaatataagtatttt 78
>RF00906;MIR1122;AP008207.1/11769320-11769475 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 166 cttatatttaggaacggagggagtac 191
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacggagggagtac 4
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 gtactccctccgttcctaaatataag 48
||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtccctaaatataag 29
