miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 151 bits (76), Expect = 2e-36
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 4 tatactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagcta 63
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 3 tatactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagcta 62
Query: 64 gtataaagttgagacatttattttgggacggaggga 99
||| |||||||||||| |||||||||||||||||||
Sbjct: 63 gtacaaagttgagacagttattttgggacggaggga 98
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtct 33
|||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataactgtct 74
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 143 bits (72), Expect = 5e-34
Identities = 90/96 (93%)
Strand = Plus / Plus
Query: 4 tatactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagcta 63
|||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||
Sbjct: 3 tatactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagtta 62
Query: 64 gtataaagttgagacatttattttgggacggaggga 99
|| ||||||||||||||||||||||||||||||||
Sbjct: 63 atacaaagttgagacatttattttgggacggaggga 98
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 72 ttgagacatttattttgggacggaggga 99
|||||||| |||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggaggga 8
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtct 33
|||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtct 74
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 141 bits (71), Expect = 2e-33
Identities = 89/95 (93%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctag 64
|||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||
Sbjct: 4 atactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatag 63
Query: 65 tataaagttgagacatttattttgggacggaggga 99
|| |||||||||||| ||||||||||| |||||||
Sbjct: 64 tacaaagttgagacacttattttgggatggaggga 98
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtct 33
|||||||||| |||||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtct 74
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 135 bits (68), Expect = 1e-31
Identities = 89/96 (92%)
Strand = Plus / Plus
Query: 4 tatactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagcta 63
|||||||||||||||||||||||||||||| ||||||||||||| |||||||| || ||
Sbjct: 3 tatactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagtta 62
Query: 64 gtataaagttgagacatttattttgggacggaggga 99
|| ||||||||||||||||||||||||||||||||
Sbjct: 63 atacaaagttgagacatttattttgggacggaggga 98
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 72 ttgagacatttattttgggacggaggga 99
|||||||| |||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggaggga 8
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtct 33
|||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtct 74
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 131 bits (66), Expect = 2e-30
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
|||||||||||||||||||||| |||||| ||||||||| || ||| ||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64
Query: 66 ataaagttgagacatttattttgggacggaggga 99
|||||||||||||| |||||||||||||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggaggga 98
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtgtct 33
||||||||||||||||||||||| |||||
Sbjct: 102 atactccctccgtcccaaaataactgtct 74
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 129 bits (65), Expect = 8e-30
Identities = 92/101 (91%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagcta 63
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||
Sbjct: 103 tatactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagtta 44
Query: 64 gtataaagttgagacatttattttgggacggagggaatact 104
|| |||| |||||||| ||||||||||||||| ||| ||||
Sbjct: 43 gtgtaaaattgagacacttattttgggacggaaggagtact 3
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 gttgagacatttattttgggacggaggga 99
||||||||| |||||||||||||||||||
Sbjct: 70 gttgagacacttattttgggacggaggga 98
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgtct 33
|||||| |||||||||||||||||||||
Sbjct: 5 tactccttccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 129 bits (65), Expect = 8e-30
Identities = 89/97 (91%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagct 62
||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2 atatattccctcggtcctaaaataagtgtcttaagcttagtacaactttgtactagagct 61
Query: 63 agtataaagttgagacatttattttgggacggaggga 99
| || |||||||||||| |||||||| ||||||||||
Sbjct: 62 aatacaaagttgagacagttattttgagacggaggga 98
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaataagtgtct 33
||||||||||||||| |||||||| |||||
Sbjct: 103 tatactccctccgtctcaaaataactgtct 74
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 123 bits (62), Expect = 5e-28
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
|||||||||||||||||||||| |||||| ||||||||| || ||| || |||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64
Query: 66 ataaagttgagacatttattttgggacggaggga 99
|||||||||||||| |||||||||||||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggaggga 98
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtgtct 33
||||||||||||||||||||||| |||||
Sbjct: 102 atactccctccgtcccaaaataactgtct 74
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 123 bits (62), Expect = 5e-28
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
|||||||||||||||||||||||||||| |||||||| || ||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64
Query: 66 ataaagttgagacatttattttgggacggaggga 99
| |||||||||||| |||||||||||||||||||
Sbjct: 65 acaaagttgagacacttattttgggacggaggga 98
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaataagtgtct 33
|||||||||||||||||||||||||||||||
Sbjct: 104 atatactccctccgtcccaaaataagtgtct 74
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 72 ttgagacatttattttgggacggaggga 99
|||||||| |||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggaggga 8
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 117 bits (59), Expect = 3e-26
Identities = 86/95 (90%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctag 64
||||||||||||| ||||||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 102 atactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctag 43
Query: 65 tataaagttgagacatttattttgggacggaggga 99
|| ||| |||||||| ||||||||| |||||||||
Sbjct: 42 tacaaatttgagacacttattttggaacggaggga 8
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 tatactccctccgtcccaaaataagtgtct 33
|||||||||||||| |||||||||||||||
Sbjct: 3 tatactccctccgttccaaaataagtgtct 32
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
|||||||||||||||||||||| ||||| | |||| ||||| ||||||||| |||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 66 ataaagttgagacatttattttgggacgga 95
|||||||||||||| |||||||||||||||
Sbjct: 41 ataaagttgagacacttattttgggacgga 12
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtgtct 33
||||||| |||||||||||||||||||||
Sbjct: 4 atactccatccgtcccaaaataagtgtct 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 ttgagacatttattttgggacggaggga 99
|||||||| |||||||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggaggga 98
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 115 bits (58), Expect = 1e-25
Identities = 92/102 (90%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctag 64
|||||||||||||| |||||||| ||||| | ||| |||||||||||||||||||||||
Sbjct: 4 atactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagctag 62
Query: 65 tataaagttgagacatttattttgggacggagggaatactac 106
|| |||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 63 tacaaagttgagacagttattttgggatggagggagtactac 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 68 aaagttgagacatttattttgggacggaggga 99
|||||||||||| |||||||| ||||||||||
Sbjct: 39 aaagttgagacagttattttgagacggaggga 8
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
||||||||||||| ||||||||||||||| | |||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 66 ataaagttgagacatttattttgggacggaggga 99
| || ||||||||| |||||||| ||| ||||||
Sbjct: 65 acaatgttgagacagttattttgagacagaggga 98
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
||||||||||||| |||||||||||||| ||| |||||||||||||||||| || ||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 66 ataaagttgagacatttattttgggacggaggga 99
| |||||| ||||| |||||||||||||||||||
Sbjct: 65 acaaagttaagacacttattttgggacggaggga 98
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtctt 34
|||||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctt 73
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 111 bits (56), Expect = 2e-24
Identities = 87/96 (90%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 4 tatactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagcta 63
|||||||||||||||||||||||||||||| | |||||||||| ||| |||||||| ||
Sbjct: 3 tatactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagtta 62
Query: 64 gtataaagttgagacatttattttgggacggaggga 99
||| |||| ||||||| |||||||||||||||||||
Sbjct: 63 gtacaaag-tgagacacttattttgggacggaggga 97
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtgtct 33
|||||||||||||||||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataagtgtct 73
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 71 gttgagacatttattttgggacggaggga 99
||||||||| |||||||||||||||||||
Sbjct: 36 gttgagacacttattttgggacggaggga 8
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 111 bits (56), Expect = 2e-24
Identities = 83/92 (90%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
|||||||||||| |||||||||||||||| |||||| ||||| ||||||||| | ||| |
Sbjct: 5 tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64
Query: 66 ataaagttgagacatttattttgggacggagg 97
| |||||||||||| |||||||||||||||||
Sbjct: 65 acaaagttgagacagttattttgggacggagg 96
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 111 bits (56), Expect = 2e-24
Identities = 86/96 (89%)
Strand = Plus / Plus
Query: 4 tatactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagcta 63
||||| ||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||
Sbjct: 3 tataccccctccgtcccaaaataagtgtcttaagcttagtacaattttatacatgagcta 62
Query: 64 gtataaagttgagacatttattttgggacggaggga 99
||| |||||| ||||| ||||||||||||||||||
Sbjct: 63 gtacaaagttaagacagatattttgggacggaggga 98
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 109 bits (55), Expect = 7e-24
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctag 64
|||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| ||||
Sbjct: 4 atactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaactag 63
Query: 65 tataaagttgagacatttattttggga 91
|| |||||||||||| |||||||||||
Sbjct: 64 tacaaagttgagacacttattttggga 90
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 109 bits (55), Expect = 7e-24
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagct 62
||||||||||||| || |||||||| ||||| ||||||||||||||||||| |||||||
Sbjct: 2 atatactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagct 61
Query: 63 agtataaagttgagacatttattttgg 89
|||| |||||||||||| |||||||||
Sbjct: 62 agtacaaagttgagacacttattttgg 88
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 109 bits (55), Expect = 7e-24
Identities = 89/101 (88%), Gaps = 7/101 (6%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgt-------cttgagcttagtacaactttgtactag 58
|||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtcttgtgtcttgagcttagtacaactttgtactaa 64
Query: 59 agctagtataaagttgagacatttattttgggacggaggga 99
|| ||||| |||||||||||| ||||||||||| |||||||
Sbjct: 65 agttagtacaaagttgagacacttattttgggatggaggga 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtgtct 33
||||||||||| |||||||||||||||||
Sbjct: 109 atactccctccatcccaaaataagtgtct 81
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 107 bits (54), Expect = 3e-23
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
|||||||||||||||||||||| | ||| | |||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 66 ataaagttgagacatttattttgggacggaggga 99
||||||||||| | |||||||| ||||||||||
Sbjct: 65 gtaaagttgagatacttattttgagacggaggga 98
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 101 bits (51), Expect = 2e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 37 gcttagtacaactttgtactagagctagtataaagttgagacatttattttgggacggag 96
|||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 36 gcttagtacaactttgtactagagctagtacaaagttgagacatttattttgaaacggag 95
Query: 97 gga 99
|||
Sbjct: 96 gga 98
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 99.6 bits (50), Expect = 7e-21
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
|||||||||||||||||||||| | ||| | |||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 66 ataaagttgagacatttattttgggacggaggga 99
||||| ||||| | |||||||| ||||||||||
Sbjct: 65 gtaaagctgagatacttattttgagacggaggga 98
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 95.6 bits (48), Expect = 1e-19
Identities = 84/96 (87%)
Strand = Plus / Plus
Query: 4 tatactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagcta 63
||||||| |||||| |||||||||||||| ||||||||| || ||| |||||||||||
Sbjct: 3 tatactctctccgttttaaaataagtgtcttaagcttagtataattttatactagagcta 62
Query: 64 gtataaagttgagacatttattttgggacggaggga 99
| | |||||| ||||| |||||||||||||||||||
Sbjct: 63 gaacaaagttaagacaattattttgggacggaggga 98
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtctt 34
|||||||||||||||||||||| ||||||
Sbjct: 101 tactccctccgtcccaaaataattgtctt 73
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 82/94 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
||||| |||| || |||||||||||||| | ||||||||||||||| || |||||||
Sbjct: 101 tactcactccatctcaaaataagtgtctcaactctagtacaactttgtattaaagctagt 42
Query: 66 ataaagttgagacatttattttgggacggaggga 99
| |||||||||||| |||||||||||||||||||
Sbjct: 41 acaaagttgagacacttattttgggacggaggga 8
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 8 ctccctccgtcccaaaataagtgtct 33
||||||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 83.8 bits (42), Expect = 4e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 38 cttagtacaactttgtactagagctagtataaagttgagacatttattttgggacggagg 97
|||||||||||||||||||| || ||||| ||| |||||||| |||||||||||||||||
Sbjct: 85 cttagtacaactttgtactaaagttagtacaaacttgagacagttattttgggacggagg 144
Query: 98 ga 99
||
Sbjct: 145 ga 146
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 8 ctccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagtat 67
|||||| ||||||||||||||||||| | ||||||||||||||| |||| | |||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaaccttagtacaactttgcactaaatttagtac 66
Query: 68 aaagttgagac 78
|||||||||||
Sbjct: 67 aaagttgagac 77
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaataagtgtct 33
|||||||||||||||||||||||| |||||
Sbjct: 151 tatactccctccgtcccaaaataactgtct 122
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 83.8 bits (42), Expect = 4e-16
Identities = 82/94 (87%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
||||||||||||| |||||||| ||||| ||||||||| ||||||| |||| |||||||
Sbjct: 100 tactccctccgtctcaaaataattgtctcaagcttagtataactttgcacta-agctagt 42
Query: 66 ataaagttgagacatttattttgggacggaggga 99
||||| || ||| | |||||||| ||||||||||
Sbjct: 41 ataaaattaagaaacttattttgagacggaggga 8
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtgtctt 34
|||||||||||||| |||||||||| ||||
Sbjct: 4 atactccctccgtctcaaaataagtttctt 33
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 79.8 bits (40), Expect = 6e-15
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagt 65
||||||||||||| |||||||| |||||| | ||||||| || ||| || || |||||||
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 66 ataaagttgagacatttattttgggacggagggaatacta 105
| |||||| ||||| ||||||||| || |||||| |||||
Sbjct: 41 acaaagttaagacagttattttggaacagagggagtacta 2
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 75 agacatttattttgggacggagggaatacta 105
|||||||||||||| |||||||||| |||||
Sbjct: 74 agacatttattttgcgacggagggagtacta 104
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 79.8 bits (40), Expect = 6e-15
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 16 gtcccaaaataagtgtcttgagcttagtacaactttgtactagagctagtataaagttga 75
|||||||||||| | ||| | |||||||||||||| |||||||||||| |||||||||
Sbjct: 91 gtcccaaaataactttctcaaacttagtacaactttatactagagctagggtaaagttga 32
Query: 76 gacatttattttgggacggaggga 99
|||| ||||||| ||||||||||
Sbjct: 31 gacacctattttgagacggaggga 8
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtc 32
|||||||||||||||||||||| ||||
Sbjct: 115 tactccctccgtcccaaaataactgtc 89
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 45 caactttgtactagagctagtataaagttgagacatttattttgggacggagggaatact 104
||||||||||||| || ||||||||||||||| || ||| ||||||||||||||| ||||
Sbjct: 33 caactttgtactaaagttagtataaagttgagtcacttaatttgggacggagggagtact 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 62 tagtataaagttgagacatttattttgggacggaggga 99
||||| ||||||||| || |||||||||||| ||||||
Sbjct: 45 tagtacaaagttgagtcacttattttgggacagaggga 8
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtactagagct 62
||||||||| ||||| | ||||||||||||| | ||||||| |||||| ||||| ||||
Sbjct: 2 atatactccttccgttctaaaataagtgtctcaatcttagtataactttatactaaagct 61
Query: 63 agtataaagttgagacatttattttgggacggaggga 99
| || ||| || | ||| ||||||||||| |||||||
Sbjct: 62 aatacaaaattaacacacttattttgggatggaggga 98
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtgt 31
||||||||||| |||||||||||||||
Sbjct: 102 atactccctccatcccaaaataagtgt 76
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 63.9 bits (32), Expect = 4e-10
Identities = 85/99 (85%), Gaps = 4/99 (4%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaataagtgtcttgagcttagtac-aactttgtactagagct 62
||||||||||||||||| ||||||||| || | ||| |||| || ||||||||| | |
Sbjct: 105 tatactccctccgtcccgaaataagtgactcaa-ctttgtactaattttgtactaaaaat 47
Query: 63 agtataaagttgaga--catttattttgggacggaggga 99
||||||||||||||| || |||||||||||||||||||
Sbjct: 46 agtataaagttgagatccacttattttgggacggaggga 8
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 aatatactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||||||
Sbjct: 1 aatatactccctccgtcccaaaataagtg 29
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 62 tagtataaagttgagacatttattttgggacggaggga 99
||||| ||||||||| || |||||| ||||||||||||
Sbjct: 63 tagtacaaagttgagtcacttatttcgggacggaggga 100
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtcttgagcttagtacaactttgtact 56
|||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtctttgctttagtacaactttgtact 51
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtgtctt 34
||||||||| ||||||||||||| ||||||
Sbjct: 4 atactccctacgtcccaaaataattgtctt 33
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 60.0 bits (30), Expect = 6e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 8 ctccctccgtcccaaaataagtgtcttgagcttagtacaactttgtacta 57
|||||||||||||||||||||||||| | |||||| ||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttagtataactttgtacta 56
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 67 taaagttgagacatttattttgggacggaggga 99
||||||||||||| |||||||||||||||||||
Sbjct: 40 taaagttgagacacttattttgggacggaggga 8
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaataagtgtct 33
||||||| |||||||||||||||||||||||
Sbjct: 92 atatacttcctccgtcccaaaataagtgtct 62
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 69 aagttgagacatttattttgggacggagg 97
||||||||||| |||||||||||||||||
Sbjct: 56 aagttgagacacttattttgggacggagg 84
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 aatatactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||||||
Sbjct: 1 aatatactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaataagtgtc 32
|||||||||||||||||||||||||||||
Sbjct: 104 tatactccctccgtcccaaaataagtgtc 76
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgtc 32
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 56.0 bits (28), Expect = 9e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgtct 33
||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
Score = 46.1 bits (23), Expect = 9e-05
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 62 tagtataaagttg-agacatttattttgggacggaggga 99
||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 46 tagtacaaagttggagacacttattttgggacggaggga 8
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 45 caactttgtactagagctagtataaagttgagacatttattttgggacggaggga 99
||||||||||||| || ||||| ||||||||| ||| |||||||| | |||||||
Sbjct: 33 caactttgtactaaagttagtacaaagttgagtcatctattttggaatggaggga 87
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 62 tagtataaagttgagacatttattttgggacggagggaatact 104
||||||||||||||| ||| |||||||| ||||||||| ||||
Sbjct: 45 tagtataaagttgagtcatctattttggaacggagggagtact 3
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||||
Sbjct: 114 tatactccctccgtcccaaaataagtg 88
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaataagtg 30
|||||||||||| |||||||||||||||
Sbjct: 2 atatactccctctgtcccaaaataagtg 29
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||||
Sbjct: 102 tatactccctccgtcccaaaataagtg 76
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 62 tagtataaagttgagacatttattttgggacggaggga 99
||||| ||||||||| || |||||||||||||||||||
Sbjct: 60 tagtacaaagttgagtcacttattttgggacggaggga 97
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtg 30
||||||||||||||||||||||||||
Sbjct: 245 atactccctccgtcccaaaataagtg 220
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtgt 31
||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtgt 27
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtg 30
||||||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtg 30
||||||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtg 30
||||||||||||||||||||||||||
Sbjct: 241 atactccctccgtcccaaaataagtg 216
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtg 30
||||||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 62 tagtataaagttgagacatttattttgggacggaggga 99
||||| ||||||||| || |||||||||||||||||||
Sbjct: 45 tagtacaaagttgagtcacttattttgggacggaggga 8
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtg 30
||||||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
Japonica Group
Length = 246
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtg 30
||||| ||||||||||||||||||||
Sbjct: 244 atactacctccgtcccaaaataagtg 219
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 245 tactccctccgtcccaaaataagtg 221
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtg 30
||||| ||||||||||||||||||||
Sbjct: 1 atactacctccgtcccaaaataagtg 26
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtg 30
||||| ||||||||||||||||||||
Sbjct: 1 atacttcctccgtcccaaaataagtg 26
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtg 30
||||| ||||||||||||||||||||
Sbjct: 1 atactacctccgtcccaaaataagtg 26
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtg 30
||||| ||||||||||||||||||||
Sbjct: 245 atactacctccgtcccaaaataagtg 220
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaataagtgtc 32
||||||||| |||||||||||||||||||
Sbjct: 84 tatactcccaccgtcccaaaataagtgtc 56
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtgtct 33
||||||||||||| |||||||||||||||
Sbjct: 131 atactccctccgttccaaaataagtgtct 103
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 tccctccgtcccaaaataagtgtcttg 35
||||||||||||||||| |||||||||
Sbjct: 8 tccctccgtcccaaaatgagtgtcttg 34
>RF00906;MIR1122;CR626933.1/11895-11804 4571:Triticum turgidum
Length = 92
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 cctccgtcccaaaataagtgtcttg 35
|||||||||||||||||||||||||
Sbjct: 85 cctccgtcccaaaataagtgtcttg 61
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 50.1 bits (25), Expect = 6e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 45 caactttgtactagagctagtataaagttgagacatttattttgggacggagg 97
||||||||||||| || ||||| ||||||||| ||| ||||||| |||||||
Sbjct: 33 caactttgtactaaagttagtacaaagttgagtcatctattttgaaacggagg 85
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtg 87
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtg 30
|||||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtg 87
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaataa 27
|||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataa 27
||||||||||||||||||||||
Sbjct: 156 tactccctccgtcccaaaataa 135
>RF00906;MIR1122;AC137999.2/12932-12822 39947:Oryza sativa
Japonica Group
Length = 111
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2 aatatactccctccgtcccaaaata 26
|||||||||||||||||||||||||
Sbjct: 1 aatatactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02004295.1/15025-15180 39946:Oryza sativa
Indica Group
Length = 156
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 2 aatatactccctccgtcccaaaata 26
|||||||||||||||||||||||||
Sbjct: 156 aatatactccctccgtcccaaaata 132
>RF00906;MIR1122;AC093953.2/44822-44955 39947:Oryza sativa Japonica
Group
Length = 134
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 2 aatatactccctccgtcccaaaata 26
|||||||||||||||||||||||||
Sbjct: 134 aatatactccctccgtcccaaaata 110
>RF00906;MIR1122;AK288180.1/1387-1262 39947:Oryza sativa Japonica
Group
Length = 126
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 2 aatatactccctccgtcccaaaata 26
|||||||||||||||||||||||||
Sbjct: 126 aatatactccctccgtcccaaaata 102
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataag 28
||||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataag 24
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataag 28
||||||||||||||||||||||||
Sbjct: 240 atactccctccgtcccaaaataag 217
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tccctccgtcccaaaataagtgtc 32
||||||||||||||||||||||||
Sbjct: 8 tccctccgtcccaaaataagtgtc 31
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 76 gacatttattttgggacggagggaata 102
|||| ||||||||||||||||||||||
Sbjct: 31 gacacttattttgggacggagggaata 5
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtc 32
||||||| |||||||||||||||||||
Sbjct: 101 tactcccgccgtcccaaaataagtgtc 75
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtgtc 32
||||||||||||||| ||||||||||||
Sbjct: 103 atactccctccgtcctaaaataagtgtc 76
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtgtc 32
|||||||||| |||||||||||||||||
Sbjct: 103 atactccctctgtcccaaaataagtgtc 76
>RF00906;MIR1122;AAAA02007259.1/4313-4455 39946:Oryza sativa
Indica Group
Length = 143
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02003593.1/26423-26497 39946:Oryza sativa
Indica Group
Length = 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 74 atatactccctccgtcccaaaata 51
>RF00906;MIR1122;AC111016.2/25572-25452 39947:Oryza sativa Japonica
Group
Length = 121
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 120 atatactccctccgtcccaaaata 97
>RF00906;MIR1122;AP004047.3/87830-87972 39947:Oryza sativa
Japonica Group
Length = 143
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AC232160.1/3827-3951 63629:Oryza minuta
Length = 125
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AC226266.1/92361-92224 63629:Oryza minuta
Length = 138
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 137 atatactccctccgtcccaaaata 114
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataagt 29
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 109 atatactccctccgtcccaaaata 86
>RF00906;MIR1122;AAAA02017235.1/6057-5946 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008208.1/1166338-1166449 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 111 atatactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02007218.1/59330-59175 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tattttgggacggagggaatacta 105
||||||||||||||||||||||||
Sbjct: 132 tattttgggacggagggaatacta 155
>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AP003760.4/5605-5476 39947:Oryza sativa Japonica
Group
Length = 130
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 129 atatactccctccgtcccaaaata 106
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataag 28
||||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataag 27
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataag 28
|||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataag 71
>RF00906;MIR1122;AAAA02006274.1/23456-23551 39946:Oryza sativa
Indica Group
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 95 atatactccctccgtcccaaaata 72
>RF00906;MIR1122;AAAA02019539.1/50507-50413 39946:Oryza sativa
Indica Group
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 80 tttattttgggacggagggaatac 103
||||||||||||||||||||||||
Sbjct: 27 tttattttgggacggagggaatac 4
>RF00906;MIR1122;AP008215.1/19940245-19940356 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 111 atatactccctccgtcccaaaata 88
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 85 atatactccctccgtcccaaaata 62
>RF00906;MIR1122;AP003381.3/77030-76947 39947:Oryza sativa
Japonica Group
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaata 26
||||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02007860.1/10023-9886 39946:Oryza sativa Indica
Group
Length = 138
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 tttattttgggacggagggaatac 103
||||||||||||||||||||||||
Sbjct: 112 tttattttgggacggagggaatac 135
>RF00906;MIR1122;AACV01013835.1/10952-10825 39947:Oryza sativa
Japonica Group
Length = 128
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 82 tattttgggacggagggaatacta 105
||||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggaatacta 2
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataag 28
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataa 27
||||||||||||||||||||||
Sbjct: 236 tactccctccgtcccaaaataa 215
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataa 27
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 46.1 bits (23), Expect = 9e-05
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 45 caactttgtactagagctagtataaagttgagacatttattttgggacggaggga 99
||||||||||||| || ||||| ||||||||| | | |||||| | |||||||||
Sbjct: 33 caactttgtactaaagatagtacaaagttgagtcgtctattttagaacggaggga 87
>RF00906;MIR1122;AY491681.1/77211-77302 4568:Triticum monococcum
Length = 92
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaata 26
|||||||||||||||||||||||
Sbjct: 90 tatactccctccgtcccaaaata 68
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtc 32
|||| ||||||||||||||||||||||
Sbjct: 106 tactacctccgtcccaaaataagtgtc 80
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaataagtgtc 32
||||||||| ||||| ||||||||||||||
Sbjct: 2 atatactccttccgttccaaaataagtgtc 31
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataagtgtc 32
||||||||| |||||||||||||||||
Sbjct: 102 tactccctcggtcccaaaataagtgtc 76
>RF00906;MIR1122;AAAA02029963.1/5445-5312 39946:Oryza sativa Indica
Group
Length = 134
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaata 26
|||||||||||||||||||||||
Sbjct: 132 tatactccctccgtcccaaaata 110
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataa 27
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataa 27
||||||||||||||||||||||
Sbjct: 132 tactccctccgtcccaaaataa 111
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaataagt 29
|||||||||||||||| ||||||||||
Sbjct: 119 atatactccctccgtctcaaaataagt 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataa 27
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02004642.1/60119-60040 39946:Oryza sativa
Indica Group
Length = 80
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2 aatatactccctccgtcccaaaa 24
|||||||||||||||||||||||
Sbjct: 80 aatatactccctccgtcccaaaa 58
>RF00906;MIR1122;AACV01013952.1/21314-21199 39947:Oryza sativa
Japonica Group
Length = 116
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2 aatatactccctccgtcccaaaa 24
|||||||||||||||||||||||
Sbjct: 116 aatatactccctccgtcccaaaa 94
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataa 27
|||||||||||||||||||||||
Sbjct: 119 atactccctccgtcccaaaataa 97
>RF00906;MIR1122;AP008216.1/16569819-16569686 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaata 26
|||||||||||||||||||||||
Sbjct: 132 tatactccctccgtcccaaaata 110
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataa 27
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataa 27
||||||||||||||||||||||
Sbjct: 99 tactccctccgtcccaaaataa 78
>RF00906;MIR1122;AK288546.1/1340-1246 39947:Oryza sativa Japonica
Group
Length = 95
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaata 26
|||||||||||||||||||||||
Sbjct: 93 tatactccctccgtcccaaaata 71
>RF00906;MIR1122;AAAA02014383.1/51051-51164 39946:Oryza sativa
Indica Group
Length = 114
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 aatatactccctccgtcccaaaa 24
|||||||||||||||||||||||
Sbjct: 1 aatatactccctccgtcccaaaa 23
>RF00906;MIR1122;AC025905.3/382-457 4530:Oryza sativa (rice)
Length = 76
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2 aatatactccctccgtcccaaaa 24
|||||||||||||||||||||||
Sbjct: 76 aatatactccctccgtcccaaaa 54
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataa 27
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataa 27
|||||||||||||||||||||||
Sbjct: 110 atactccctccgtcccaaaataa 88
>RF00906;MIR1122;AP004256.3/9033-9136 39947:Oryza sativa Japonica
Group
Length = 104
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 ttattttgggacggagggaatac 103
|||||||||||||||||||||||
Sbjct: 79 ttattttgggacggagggaatac 101
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataa 27
|||||||||||||||||||||||
Sbjct: 126 atactccctccgtcccaaaataa 104
>RF00906;MIR1122;AAAA02007660.1/3740-3838 39946:Oryza sativa
Indica Group
Length = 99
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tatactccctccgtcccaaaata 26
|||||||||||||||||||||||
Sbjct: 3 tatactccctccgtcccaaaata 25
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 96 atactccctccgtcccaaaata 75
>RF00906;MIR1122;AP003412.4/28754-28834 39947:Oryza sativa
Japonica Group
Length = 81
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2 aatatactccctccgtcccaaaa 24
|||||||||||||||||||||||
Sbjct: 81 aatatactccctccgtcccaaaa 59
>RF01058;MIR806;AAAA02002634.1/48844-49087 39946:Oryza sativa
Indica Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtg 30
||||||| ||||||||||||||||||
Sbjct: 1 atactccatccgtcccaaaataagtg 26
>RF01058;MIR806;AC137621.2/17491-17729 39947:Oryza sativa Japonica
Group
Length = 239
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF01058;MIR806;AP008218.1/7228032-7227791 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF01058;MIR806;AACV01010423.1/14473-14229 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 122 atactccctccgtcccaaaata 101
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 122 atactccctccgtcccaaaata 101
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 4 tatactccctccgtcccaaaat 25
||||||||||||||||||||||
Sbjct: 140 tatactccctccgtcccaaaat 119
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaataagtgtc 32
|||||||||||||||| ||||||||||||
Sbjct: 2 atatactccctccgtcttaaaataagtgtc 31
>RF00906;MIR1122;EF059989.1/24895-24770 29664:Brachypodium
sylvaticum
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaataagtg 30
||||||||||||||||||| ||||||
Sbjct: 4 atactccctccgtcccaaattaagtg 29
>RF00906;MIR1122;EU730899.1/86003-86096 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaataagtg 30
|||| |||||||||||||||||||||
Sbjct: 91 ataccccctccgtcccaaaataagtg 66
>RF00906;MIR1122;AAAA02034555.1/16647-16527 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 37 atactccctccgtcccaaaata 58
>RF00906;MIR1122;AAAA02004035.1/49440-49310 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 128 atactccctccgtcccaaaata 107
>RF00906;MIR1122;AAAA02025635.1/7223-7330 39946:Oryza sativa
Indica Group
Length = 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataa 27
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 159 atactccctccgtcccaaaata 138
>RF00906;MIR1122;AAAA02012747.1/1212-1288 39946:Oryza sativa
Indica Group
Length = 77
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaa 24
||||||||||||||||||||||
Sbjct: 76 atatactccctccgtcccaaaa 55
>RF00906;MIR1122;AAAA02026282.1/2845-2975 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02020504.1/20392-20526 39946:Oryza sativa
Indica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 132 atactccctccgtcccaaaata 111
>RF00906;MIR1122;CR855084.1/66223-66112 4530:Oryza sativa (rice)
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaa 24
||||||||||||||||||||||
Sbjct: 111 atatactccctccgtcccaaaa 90
>RF00906;MIR1122;AC215820.3/114332-114188 4537:Oryza punctata
Length = 145
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa Indica
Group
Length = 149
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 146 atactccctccgtcccaaaata 125
>RF00906;MIR1122;AAAA02026694.1/32137-32261 39946:Oryza sativa
Indica Group
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 122 atactccctccgtcccaaaata 101
>RF00906;MIR1122;AP008210.1/17746245-17746133 39947:Oryza sativa
Japonica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaa 24
||||||||||||||||||||||
Sbjct: 112 atatactccctccgtcccaaaa 91
>RF00906;MIR1122;AL831801.4/77594-77709 4530:Oryza sativa (rice)
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tatactccctccgtcccaaaat 25
||||||||||||||||||||||
Sbjct: 3 tatactccctccgtcccaaaat 24
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 113 atactccctccgtcccaaaata 92
>RF00906;MIR1122;AP008212.1/25859487-25859353 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 132 atactccctccgtcccaaaata 111
>RF00906;MIR1122;AAAA02007975.1/29302-29380 39946:Oryza sativa
Indica Group
Length = 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01003595.1/38638-38749 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 128 atactccctccgtcccaaaata 107
>RF00906;MIR1122;AACV01014374.1/13115-13004 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataa 27
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02028034.1/27580-27414 39946:Oryza sativa
Indica Group
Length = 167
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 164 atactccctccgtcccaaaata 143
>RF00906;MIR1122;AP004259.2/7530-7458 39947:Oryza sativa Japonica
Group
Length = 73
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaa 24
||||||||||||||||||||||
Sbjct: 72 atatactccctccgtcccaaaa 51
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataa 27
||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccaaaataa 92
>RF00906;MIR1122;AP008207.1/22739295-22739406 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AC079357.3/127350-127255 39947:Oryza sativa
Japonica Group
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 93 atactccctccgtcccaaaata 72
>RF00906;MIR1122;AP005421.3/127890-127779 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01024869.1/7310-7232 39947:Oryza sativa
Japonica Group
Length = 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 76 atactccctccgtcccaaaata 55
>RF00906;MIR1122;AP008216.1/14356287-14356423 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 atatactccctccgtcccaaaa 24
||||||||||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaa 23
>RF00906;MIR1122;AP003883.3/40264-40104 39947:Oryza sativa
Japonica Group
Length = 161
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AC226706.2/62906-62750 63629:Oryza minuta
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 154 atactccctccgtcccaaaata 133
>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008215.1/18970521-18970611 39947:Oryza sativa
Japonica Group
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgtcccaaaataa 27
||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataa 72
>RF00906;MIR1122;AACV01019763.1/6220-6087 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 ttattttgggacggagggaata 102
||||||||||||||||||||||
Sbjct: 109 ttattttgggacggagggaata 130
>RF00906;MIR1122;AY947286.1/128-10 4530:Oryza sativa (rice)
Length = 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02029631.1/6082-5948 39946:Oryza sativa Indica
Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3 atatactccctccgtcccaaaa 24
||||||||||||||||||||||
Sbjct: 134 atatactccctccgtcccaaaa 113
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataa 27
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgtcccaaaataa 27
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP008207.1/24395058-24395107 39947:Oryza sativa
Japonica Group
Length = 50
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 47 atactccctccgtcccaaaata 26
>RF00906;MIR1122;AP008215.1/21144119-21144034 39947:Oryza sativa
Japonica Group
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa
Japonica Group
Length = 107
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atactccctccgtcccaaaata 26
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
