miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 54.0 bits (27), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 7 tactcactccgtcccaaagtaagtgttgtaaatttagtactaa 49
||||| |||||||||||| ||||||| | ||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtcgcaaatttagtactaa 47
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 gaaatactcactccgtcccaaa 24
||||||||||||||||||||||
Sbjct: 1 gaaatactcactccgtcccaaa 22
>RF00906;MIR1122;AP008212.1/29073772-29073890 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 63 tttaggacggagggagcatata 84
||||||||||||||||||||||
Sbjct: 22 tttaggacggagggagcatata 1
