miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 99.6 bits (50), Expect = 6e-21
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 13 tctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttatat 72
||||||||||| ||||||| |||||||| |||||||||| ||| ||||||||||||||||
Sbjct: 82 tctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgctcttatat 23
Query: 73 taatttaaggaaggagta 90
||||||| ||| ||||||
Sbjct: 22 taatttacggagggagta 5
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 87.7 bits (44), Expect = 2e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||||||||||| ||| |||||| |||||||||| ||| |||||| |||||||
Sbjct: 84 cctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacactcttat 25
Query: 71 attaatttaaggaaggagta 90
|||| |||| ||| ||||||
Sbjct: 24 attagtttacggagggagta 5
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 87.7 bits (44), Expect = 2e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||||||||||||| | |||||| ||||||| || ||| ||||||||||||||
Sbjct: 10 cctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgctcttat 69
Query: 71 attaatttaaggaaggagta 90
|||| |||| ||| ||||||
Sbjct: 70 attagtttacggagggagta 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttaga 40
|||| |||||||||||||||| ||||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttaga 55
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 87.7 bits (44), Expect = 2e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||||||||||||| |||||||| |||||||||| | | ||||||||||||||
Sbjct: 10 cctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgctcttat 69
Query: 71 atta 74
||||
Sbjct: 70 atta 73
Score = 50.1 bits (25), Expect = 5e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 19 aactaatataagaacgtttagaacactaaagtaataagctaaacgctcttatattaattt 78
||||||||||||| |||||||| ||||| || | | |||||||||||||||||| |||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 79 a 79
|
Sbjct: 16 a 16
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||| |||||||||||||||| |||||||| ||||||| || | | | |||| |||||||
Sbjct: 84 cctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactcttat 25
Query: 71 attaatttaaggaaggagtac 91
||||||||| ||| |||||||
Sbjct: 24 attaatttacggagggagtac 4
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||||||||||||| || ||||| |||||||||| | | |||| |||||||||
Sbjct: 84 cctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgctcttat 25
Query: 71 attaattta 79
|||| ||||
Sbjct: 24 attagttta 16
Score = 50.1 bits (25), Expect = 5e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||||||||||||| || ||||| ||||| || | | |||| |||||||||
Sbjct: 10 cctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgctcttat 69
Query: 71 attaattta 79
|||| ||||
Sbjct: 70 attagttta 78
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||| |||||||||||||||| ||||||||| ||||||||||| | ||||| ||| ||||
Sbjct: 10 cctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgcttttat 69
Query: 71 attaattta 79
|||| ||||
Sbjct: 70 attagttta 78
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||||||||||||||||||||||||||||| ||||| || || ||||||||| ||||
Sbjct: 84 cctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgcttttat 25
Query: 71 attaatttaaggaaggagtac 91
|||| |||| ||| |||||||
Sbjct: 24 attagtttacggagggagtac 4
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||| |||||||||||||| | ||||||||| |||||| || | | ||||||| ||||||
Sbjct: 10 cctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgttcttat 69
Query: 71 attaattta 79
|||| ||||
Sbjct: 70 attagttta 78
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||| |||||||||||||||| ||||||||| |||||| || | | ||||||||||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgctcttat 25
Query: 71 attaattta 79
|||| ||||
Sbjct: 24 attagttta 16
Score = 71.9 bits (36), Expect = 1e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||||||||||||| |||||||| ||||| || || ||||||||||||||
Sbjct: 10 cctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgctcttat 69
Query: 71 attaatttaaggaaggagta 90
|||| |||| ||| ||||||
Sbjct: 70 attagtttacggagggagta 89
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 71.9 bits (36), Expect = 1e-12
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 8 cttcctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctct 67
|||||||||||||||||||||||| | |||||| ||||| || | | |||||||||||
Sbjct: 87 cttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgctct 28
Query: 68 tatattaatttaaggaaggagtac 91
||||||| |||| ||| |||||||
Sbjct: 27 tatattagtttacggagggagtac 4
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||| |||||||||||||||| ||||||| ||||||| || | | ||||| ||||||||
Sbjct: 10 cctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgctcttat 69
Query: 71 attaattta 79
|||| ||||
Sbjct: 70 attagttta 78
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||||||||||||| | |||||| |||||||||| | | ||||| | ||||||
Sbjct: 10 cctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttat 69
Query: 71 attaatttaaggaaggagtaca 92
|||| |||| || ||||||||
Sbjct: 70 attagtttacagagggagtaca 91
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacacta 46
||||||||||||||||||||| | |||||| |||||
Sbjct: 84 cctctgtaaactaatataagaccttttagatcacta 49
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 65.9 bits (33), Expect = 9e-11
Identities = 75/88 (85%), Gaps = 7/88 (7%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaat------aag-ctaaacg 63
||||||||||||||||||||| | |||||| |||||||||| | ||| |||||||
Sbjct: 10 cctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaagtctaaacg 69
Query: 64 ctcttatattaatttaaggaaggagtac 91
||||||||||| |||||||| |||||||
Sbjct: 70 ctcttatattagtttaaggagggagtac 97
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 65.9 bits (33), Expect = 9e-11
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||||||||||| | | |||||| ||||| |||||| ||||| ||||||||
Sbjct: 10 cctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgctcttat 69
Query: 71 attaatttaaggaaggagtac 91
|||| |||| ||| |||||||
Sbjct: 70 attagtttatggagggagtac 90
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 65.9 bits (33), Expect = 9e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||||||||| |||||||||| ||||| || ||||||| || | | ||||||||||||||
Sbjct: 10 cctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgctcttat 69
Query: 71 attaattta 79
|||| ||||
Sbjct: 70 attagttta 78
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||| |||||||||||||||| |||||||| ||||| || | | | ||||||||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 71 attaattta 79
|||||||||
Sbjct: 24 attaattta 16
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 61.9 bits (31), Expect = 1e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||||||||| ||||||||| |||||||| |||| ||||| | | ||||||||||||||
Sbjct: 10 cctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgctcttat 69
Query: 71 att 73
|||
Sbjct: 70 att 72
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 60.0 bits (30), Expect = 5e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 14 ctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttatatt 73
|||||||||||||||| | | |||||||||||| || ||| |||||||||||||||||
Sbjct: 81 ctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgctcttatatt 22
Query: 74 aattta 79
| ||||
Sbjct: 21 agttta 16
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagta 51
||||||||||||||||||||| |||||||| |||||||||
Sbjct: 10 cctctgtaaactaatataagagcgtttagattactaaagta 50
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 58.0 bits (29), Expect = 2e-08
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 10 tcctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctctta 69
|||||||||||||||||||| | | |||||| |||| ||||| | | ||||| |||||||
Sbjct: 8 tcctctgtaaactaatataaaagcatttagatcact-aagtagtgatctaaatgctctta 66
Query: 70 tattaatttaaggaaggagta 90
||||| |||| ||| ||||||
Sbjct: 67 tattagtttacggagggagta 87
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 56.0 bits (28), Expect = 8e-08
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||| ||||| ||||||||| ||||||| ||||||| || | ||||||||||||||
Sbjct: 10 cctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgctcttat 69
Query: 71 attaatttaaggaaggagta 90
|||| |||| ||| ||||||
Sbjct: 70 attagtttacggagggagta 89
Score = 56.0 bits (28), Expect = 8e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacacta 46
|||| |||||||||||||||| ||||||||||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagaacacta 49
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 56.0 bits (28), Expect = 8e-08
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 23 aatataagaacgtttagaacactaaagtaataagctaaacgctcttatattaatttaagg 82
||||||||| |||||||| |||||||||| | | ||||| ||||||||||| |||| |
Sbjct: 22 aatataagagcgtttagagcactaaagtagttatctaaatgctcttatatttctttatag 81
Query: 83 aaggagtacata 94
| ||||||||||
Sbjct: 82 agggagtacata 93
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 56.0 bits (28), Expect = 8e-08
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||| |||||||||||||||||| |||||| ||| ||||| | ||||| ||||||||
Sbjct: 10 cctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgctcttat 69
Query: 71 attaatttaaggaaggagta 90
|||| |||| ||| ||||||
Sbjct: 70 attagtttatggagggagta 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 17 taaactaatataagaacgtttagaacacta 46
||||||||||||||| | ||||||||||||
Sbjct: 78 taaactaatataagagcatttagaacacta 49
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 56.0 bits (28), Expect = 8e-08
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||| |||||||||||||||| | |||||| || |||| || | | ||||||||||||||
Sbjct: 129 cctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgctcttat 70
Query: 71 atta 74
||||
Sbjct: 69 atta 66
Score = 54.0 bits (27), Expect = 3e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 20 actaatataagaacgtttagaacactaaagtaataagctaaacgctcttatattaattta 79
|||||||||||| |||||||| ||||| |||| | ||||| |||||||||||| ||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 80 aggaaggagta 90
||| ||||||
Sbjct: 124 cggagggagta 134
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttag 39
||||||||||||||||||||| |||||||
Sbjct: 10 cctctgtaaactaatataagagcgtttag 38
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 54.0 bits (27), Expect = 3e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 16 gtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttatattaa 75
|||||| ||||||||| |||| ||| |||| ||||| | | |||||||||||||||||
Sbjct: 79 gtaaacaaatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttc 20
Query: 76 tttaaggaaggagta 90
|||| ||| ||||||
Sbjct: 19 tttacggagggagta 5
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 54.0 bits (27), Expect = 3e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 16 gtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttatattaa 75
|||||||||||||||| | |||||||||||| || ||| ||||| |||||||||||
Sbjct: 79 gtaaactaatataagagcatttagaacactattttagtaatctaaatactcttatattag 20
Query: 76 tttaaggaaggagtacata 94
|||| || ||||||||||
Sbjct: 19 tttacagagggagtacata 1
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 54.0 bits (27), Expect = 3e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||| |||||||| |||||||| | ||||| || | | ||||||||||||||
Sbjct: 10 cctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgctcttat 69
Query: 71 att 73
|||
Sbjct: 70 att 72
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaa 48
||||||||||||||||||||| | |||||| |||||||
Sbjct: 10 cctctgtaaactaatataagagcatttagatcactaaa 47
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgttt 37
||||||||||||||||||||| |||||
Sbjct: 91 cctctgtaaactaatataagagcgttt 65
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 52.0 bits (26), Expect = 1e-06
Identities = 68/81 (83%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||||||||||||| ||||||| |||||| || | ||||||||| ||||
Sbjct: 10 cctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgctattat 67
Query: 71 attaatttaaggaaggagtac 91
|||| |||| ||| |||||||
Sbjct: 68 attagtttacggagggagtac 88
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 52.0 bits (26), Expect = 1e-06
Identities = 68/81 (83%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||||||||||| | ||||||| |||||| || | ||||||||||||||
Sbjct: 10 cctctgtaaactaatataaaagtgtttagataactaaaatagtt--ctaaacgctcttat 67
Query: 71 attaatttaaggaaggagtac 91
|||| |||| ||| |||||||
Sbjct: 68 attagtttacggagggagtac 88
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaac 42
|||| |||||||||||||||| ||||||||||
Sbjct: 82 cctccgtaaactaatataagagcgtttagaac 51
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaa 47
||||||||||||||||||||| | |||||| ||||||
Sbjct: 10 cctctgtaaactaatataagaccttttagatcactaa 46
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacacta 46
||||||||||||||||||||| | |||||| |||||
Sbjct: 86 cctctgtaaactaatataagaccttttagatcacta 51
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 50.1 bits (25), Expect = 5e-06
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
||||||||||||||||||||| | |||||| |||| | |||| | ||||||||| ||||
Sbjct: 83 cctctgtaaactaatataagagcatttagatcact-acttaatgatctaaacgcttttat 25
Query: 71 attaattta 79
|||| ||||
Sbjct: 24 attagttta 16
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttat 70
|||| |||||||||||||||| | |||| | || |||| || | | |||||| |||||||
Sbjct: 84 cctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacactcttat 25
Query: 71 attaatttaaggaaggagta 90
|||| |||| ||| ||||||
Sbjct: 24 attagtttacggagggagta 5
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagaacgtttagaacacta 46
||||||||||||||||||||| ||||||| |||||
Sbjct: 10 cctctgtaaactaatataagagtgtttagatcacta 45
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 46.1 bits (23), Expect = 8e-05
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 15 tgtaaactaatataagaacgtttagaacactaaagtaataagctaaacgctcttatatta 74
||||||||||||||||| |||| ||| || |||| | | | |||||| |||||||||||
Sbjct: 14 tgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctcttatatta 73
Query: 75 atttaaggaaggagt 89
|||| ||| |||||
Sbjct: 74 gtttacggagggagt 88
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 8e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 23 aatataagaacgtttagaacactaaagtaataagctaaacgctcttatatt 73
||||||||| || |||| |||||||||| | | |||||||||||||||||
Sbjct: 72 aatataagagtgtctagatcactaaagtagtgatctaaacgctcttatatt 22
