miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 93

 Score =  103 bits (52), Expect = 4e-22
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                      
Query: 9  tccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgcttta 68
          ||||| ||||||||||||||||||||||||||||||||||||| |||||||||  || | 
Sbjct: 86 tcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaatactctt 27

                              
Query: 69 atattagttgacagagggag 88
          ||||||||| ||||||||||
Sbjct: 26 atattagtttacagagggag 7



 Score = 54.0 bits (27), Expect = 3e-07
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 6  tactccctccgtaaactaatataagagcatttaga 40
          ||||||||| ||||||||||||||||| |||||||
Sbjct: 5  tactccctctgtaaactaatataagagtatttaga 39




>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
          Length = 93

 Score =  101 bits (51), Expect = 2e-21
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||| | |||||||||||||| |||||||||||||||| |||| |||||||||||||
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggag 7



 Score = 56.0 bits (28), Expect = 8e-08
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 5  ctactccctccgtaaactaatataagagcatttaga 40
          |||||||||| |||||||||||||||||| ||||||
Sbjct: 4  ctactccctctgtaaactaatataagagcgtttaga 39




>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
          Length = 93

 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                      
Query: 5  ctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgc 64
          ||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| |
Sbjct: 90 ctactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacac 31

                                  
Query: 65 tttaatattagttgacagagggag 88
          | | ||||| ||| | ||||||||
Sbjct: 30 tcttatattggtttatagagggag 7




>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
          Length = 93

 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct: 5  tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64

                      
Query: 66 ttaatattagtt 77
           | |||||||||
Sbjct: 65 cttatattagtt 76



 Score = 69.9 bits (35), Expect = 6e-12
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||||||||| ||||||||||||||||||||||||  | ||   || | ||||||| |||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30

                                 
Query: 66 ttaatattagttgacagagggag 88
          || ||||||||| ||||||||||
Sbjct: 29 tttatattagtttacagagggag 7




>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
          Length = 91

 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 75/83 (90%), Gaps = 2/83 (2%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||||||||||||||||||||||||||| ||||||  ||||||||| | |||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30

                                 
Query: 66 ttaatattagttgacagagggag 88
          || ||||||||| ||||||||||
Sbjct: 29 tttatattagtttacagagggag 7




>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 93.7 bits (47), Expect = 4e-19
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| |||||||||||||||| | |||||| |||||||||| || ||||||||||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30

                                 
Query: 66 ttaatattagttgacagagggag 88
          || ||||||||| || |||||||
Sbjct: 29 tttatattagtttacggagggag 7



 Score = 69.9 bits (35), Expect = 6e-12
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||||||||||||||||||||||| ||| ||||||| ||||   || | ||||||||| |
Sbjct: 5  tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| ||||||||||
Sbjct: 65 cttatattagtttacagagggag 87




>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 93.7 bits (47), Expect = 4e-19
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||||||||||||||||||||||||||| ||||||  ||||||||| | ||||||| |||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggag 7



 Score = 85.7 bits (43), Expect = 9e-17
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| ||||||||||||||||||||||||| |||||   || |||||||||||||
Sbjct: 5  tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| || |||||||
Sbjct: 65 cttatattagtttacggagggag 87




>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
          Length = 93

 Score = 93.7 bits (47), Expect = 4e-19
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| |||||||||||||||||| |||||| |||||||||| || ||||||||||
Sbjct: 5  tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| || |||||||
Sbjct: 65 cttatattagtttacggagggag 87



 Score = 87.7 bits (44), Expect = 2e-17
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                      
Query: 5  ctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgc 64
          ||||||||||||||||||||||||||||| ||||||| ||||   || | ||||||||||
Sbjct: 90 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgc 31

                                  
Query: 65 tttaatattagttgacagagggag 88
          | | ||||||||| ||||||||||
Sbjct: 30 tcttatattagtttacagagggag 7




>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
          Length = 91

 Score = 89.7 bits (45), Expect = 6e-18
 Identities = 73/81 (90%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                      
Query: 5  ctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgc 64
          |||||||||||||||||||||||||||||||||||| |||||  ||| | ||||||| ||
Sbjct: 88 ctactccctccgtaaactaatataagagcatttagatcacta-cttagtgatctaaatgc 30

                               
Query: 65 tttaatattagttgacagagg 85
          ||| ||||||||| |||||||
Sbjct: 29 ttttatattagtttacagagg 9



 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 11 cctccgtaaactaatataagagcatttagaacacta 46
          |||| |||||||||||||| |||||||||| |||||
Sbjct: 9  cctctgtaaactaatataaaagcatttagatcacta 44




>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
          wheat)
          Length = 93

 Score = 87.7 bits (44), Expect = 2e-17
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                      
Query: 5  ctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgc 64
          ||||||||||||||||||||||||||||  |||||| |||||||||||| || |||| ||
Sbjct: 4  ctactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgc 63

                                  
Query: 65 tttaatattagttgacagagggag 88
          | | ||||||||| || |||||||
Sbjct: 64 tcttatattagtttaccgagggag 87



 Score = 60.0 bits (30), Expect = 5e-09
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                            
Query: 5  ctactccctccgtaaactaatataagagcattta 38
          |||||||||| |||||||||||||||||||||||
Sbjct: 90 ctactccctcggtaaactaatataagagcattta 57




>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
          Length = 92

 Score = 87.7 bits (44), Expect = 2e-17
 Identities = 66/72 (91%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| ||||||||||||||||||||||||| |||||  ||||| |||||||||||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcacta-cttaatgatctaaacgct 30

                      
Query: 66 ttaatattagtt 77
          || |||||||||
Sbjct: 29 tttatattagtt 18




>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 85.7 bits (43), Expect = 9e-17
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||| |||| ||||||||||||||||||||||||| |||||||||| | | |||||||||
Sbjct: 89 tacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgct 30

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| || |||||||
Sbjct: 29 cttatattagtttacggagggag 7



 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||||||||||||||||||||||||||| |||||  |||||   || | ||||||| |||
Sbjct: 5  tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64

                              
Query: 66 ttaatattagttgacagagg 85
           | ||||||||| |||||||
Sbjct: 65 cttatattagtttacagagg 84




>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 93

 Score = 85.7 bits (43), Expect = 9e-17
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||||||||||||||||||||||| |  ||||| |||| ||||||| |||| |||| |||
Sbjct: 89 tactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgct 30

                                 
Query: 66 ttaatattagttgacagagggag 88
          || ||||||||| ||||||||||
Sbjct: 29 tttatattagtttacagagggag 7



 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 6  tactccctccgtaaactaatataagagcattta 38
          ||||||||| |||||||||||||| ||||||||
Sbjct: 5  tactccctctgtaaactaatataaaagcattta 37




>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
          vulgare (domesticated barley)
          Length = 93

 Score = 85.7 bits (43), Expect = 9e-17
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||||||||| |||||||||||||||||||||||||||||| || | ||||||||| | |
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| || |||||||
Sbjct: 29 cttatattagtttacggagggag 7



 Score = 61.9 bits (31), Expect = 1e-09
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 6  tactccctccgtaaactaatataagagcatttaga 40
          |||||||||||||||||||||||||| ||||||||
Sbjct: 5  tactccctccgtaaactaatataagaacatttaga 39




>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
          Length = 93

 Score = 83.8 bits (42), Expect = 4e-16
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                      
Query: 11 cctccgtaaactaatataagagcatttagaacactattttaataatctaaacgctttaat 70
          ||||||||||||||||||||||| |||||| |||||||||| | ||| ||||||| | ||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25

                            
Query: 71 attagttgacagagggag 88
          |||| || ||||||||||
Sbjct: 24 attaatttacagagggag 7



 Score = 56.0 bits (28), Expect = 8e-08
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                      
Query: 2  tttctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaa 61
          ||||||||||||| ||||| |||||||||||| ||| || |||||   || | |||||||
Sbjct: 1  tttctactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaa 60

                          
Query: 62 cgctttaatattagtt 77
          |||| | |||||||||
Sbjct: 61 cgctcttatattagtt 76




>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
          Length = 93

 Score = 81.8 bits (41), Expect = 1e-15
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                      
Query: 7  actccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgctt 66
          ||||||||||||||||||||||||||  |||||| ||| |||||||| |||| |||||| 
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29

                               
Query: 67 taatattagttgacagaggga 87
          | ||||||||| ||| |||||
Sbjct: 28 ttatattagtttacaaaggga 8




>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
          Length = 93

 Score = 79.8 bits (40), Expect = 6e-15
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                      
Query: 9  tccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgcttta 68
          ||||||||||||||||||||||||| ||||||| ||||   |||| ||||||| ||||| 
Sbjct: 8  tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67

                              
Query: 69 atattagttgacagagggag 88
          ||||||||| ||| ||||||
Sbjct: 68 atattagtttacaaagggag 87



 Score = 67.9 bits (34), Expect = 2e-11
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||  |||||||||||||| |||||||||| || || |||| || ||||||||||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30

                                
Query: 66 ttaatattagttgacagaggga 87
           | ||||||||| || ||||||
Sbjct: 29 cttatattagtttacggaggga 8




>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
          (bread wheat)
          Length = 91

 Score = 79.8 bits (40), Expect = 6e-15
 Identities = 73/83 (87%), Gaps = 2/83 (2%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||||||||||||||||||||||| ||| ||||||  ||||||||| | |||||||| ||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggag 7



 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 6  tactccctccgtaaactaatataagag 32
          ||||||||| |||||||||||||||||
Sbjct: 5  tactccctctgtaaactaatataagag 31




>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
          Length = 93

 Score = 77.8 bits (39), Expect = 2e-14
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||||||||| |||||||||||  ||| || |||||||||| | |||||||||||
Sbjct: 5  tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| || |||||||
Sbjct: 65 cttatattagtttactgagggag 87



 Score = 56.0 bits (28), Expect = 8e-08
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                  
Query: 7  actccctccgtaaactaatataagagcatttagaacacta 46
          |||||||| |||||||||||||||||| |||||| |||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcacta 49




>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 77.8 bits (39), Expect = 2e-14
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| ||||||||||||||||||  ||||| ||||| |||| | |||||| ||||
Sbjct: 5  tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| ||||||||||
Sbjct: 65 cttatattagtttacagagggag 87



 Score = 67.9 bits (34), Expect = 2e-11
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                      
Query: 4  tctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacg 63
          ||||||||||| ||||||||||||||||||  ||||| |||||   || | |||||| ||
Sbjct: 91 tctactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcg 32

                                        
Query: 64 ctttaatattagttgacagagggagaattt 93
          || | ||||||||| |||||||||| ||||
Sbjct: 31 ctcttatattagtttacagagggagtattt 2




>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
          Length = 93

 Score = 77.8 bits (39), Expect = 2e-14
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||||||||||||||||||||||||||  ||||||  |||| |||| | ||||||| | |
Sbjct: 5  tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64

                                 
Query: 66 ttaatattagttgacagagggag 88
          || ||||||||| ||||||||||
Sbjct: 65 tttatattagtttacagagggag 87



 Score = 61.9 bits (31), Expect = 1e-09
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| |||||||||||||| | |||||||| |||||   || |||||||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| || |||||||
Sbjct: 29 cttatattagtttacggagggag 7




>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
          subsp. dicoccoides
          Length = 93

 Score = 77.8 bits (39), Expect = 2e-14
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| |||||||||||||||||  |||||| ||||| |||| |||| ||||  ||
Sbjct: 5  tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64

                                 
Query: 66 ttaatattagttgacagagggag 88
          || ||||||||| ||||||||||
Sbjct: 65 tttatattagtttacagagggag 87




>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
          Length = 92

 Score = 77.8 bits (39), Expect = 2e-14
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                      
Query: 19 aactaatataagagcatttagaacactattttaataatctaaacgctttaatattagttg 78
          ||||||||||||||| |||||| ||||| |||| | ||||||||||| | ||||||||| 
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17

                         
Query: 79 acagagggagaattt 93
          |||||||||| ||||
Sbjct: 16 acagagggagtattt 2



 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| |||||||||||||||||| |||||| |||||   || | |||||||||||
Sbjct: 5  tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64

                      
Query: 66 ttaatattagtt 77
           | |||||||||
Sbjct: 65 cttatattagtt 76




>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 138

 Score = 73.8 bits (37), Expect = 4e-13
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 20  actaatataagagcatttagaacactattttaataatctaaacgctttaatattagttga 79
           |||||||||||||| |||||| |||||||||||| ||||||| ||| | ||||||||| |
Sbjct: 64  actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123

                    
Query: 80  cagagggag 88
           | |||||||
Sbjct: 124 cggagggag 132



 Score = 69.9 bits (35), Expect = 6e-12
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                              
Query: 6   tactccctccgtaaactaatataagagcatttaga 40
           |||||||||||||||||||||||||||||||||||
Sbjct: 134 tactccctccgtaaactaatataagagcatttaga 100



 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                   
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaac 62
          ||||||||| |||||||||||||||||| |||||  ||  |||||||| ||||||||
Sbjct: 5  tactccctctgtaaactaatataagagcgtttaggtcataattttaatgatctaaac 61




>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
          Length = 93

 Score = 69.9 bits (35), Expect = 6e-12
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||||||||| |||||||||||| ||||||  |||| |||| | |||||||||||
Sbjct: 5  tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||| ||||| ||||| ||||
Sbjct: 65 cttatagtagtttacagacggag 87



 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                      
Query: 4  tctactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacg 63
          |||||||| || |||||||| ||||||||| |||||| |||||   || |||||||||||
Sbjct: 91 tctactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacg 32

                                   
Query: 64 ctttaatattagttgacagagggag 88
          || | |||||| || || |||||||
Sbjct: 31 ctcttatattaatttacggagggag 7




>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
          Length = 93

 Score = 67.9 bits (34), Expect = 2e-11
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| |||||||||||||||| | |||||| ||||| |||| | ||||||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30

                                
Query: 66 ttaatattagttgacagaggga 87
           | ||||||||| |||||||||
Sbjct: 29 cttatattagtttacagaggga 8



 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                      
Query: 9  tccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgcttta 68
          |||||| |||||||||||||||| | |||||| |||||   || | ||||||| | | | 
Sbjct: 8  tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67

                              
Query: 69 atattagttgacagagggag 88
          ||||||||| ||||||||||
Sbjct: 68 atattagtttacagagggag 87




>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                  
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaa 61
          ||||||||| ||||||||||||||||||||| ||| ||||| |||| | |||||||
Sbjct: 5  tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaa 60



 Score = 61.9 bits (31), Expect = 1e-09
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||||||||||||||  |||||||||||||||||| |||||   || | |||| || |||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30

                                 
Query: 66 ttaatattagttgacagagggag 88
           | ||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggag 7




>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
          Length = 100

 Score = 60.0 bits (30), Expect = 5e-09
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                    
Query: 5  ctactccctccgtaaactaatataagagcatttagaacacta 46
          |||| ||||| ||||||||||||||||||||||||| |||||
Sbjct: 4  ctaccccctctgtaaactaatataagagcatttagatcacta 45



 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 73/88 (82%), Gaps = 7/88 (7%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagag-----catttaga--acactattttaataatct 58
          ||||||||| |||||||||||||||||     ||||||||   |||||||||| | ||||
Sbjct: 96 tactccctctgtaaactaatataagagcgtttcatttagatctcactattttagtgatct 37

                                      
Query: 59 aaacgctttaatattagttgacagaggg 86
          ||| ||| | ||||||||| ||||||||
Sbjct: 36 aaatgctcttatattagtttacagaggg 9




>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
          Length = 100

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                   
Query: 6  tactccctccgtaaactaatataagagcatttagaacacta 46
          ||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 5  tactccctctgtaaactaatataagagcttttagatcacta 45



 Score = 54.0 bits (27), Expect = 3e-07
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                             
Query: 6  tactccctccgtaaactaatataagagcatttaga 40
          |||||||||| ||||||||||||||||| ||||||
Sbjct: 96 tactccctccttaaactaatataagagcgtttaga 62




>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
          Length = 66

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                       
Query: 5  ctactccctccgtaaactaatataagagc 33
          |||||||||||||||||||||||||||||
Sbjct: 63 ctactccctccgtaaactaatataagagc 35



 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 6  tactccctccgtaaactaatataagagca 34
          ||||||||| |||||||||||||||||||
Sbjct: 5  tactccctctgtaaactaatataagagca 33




>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
          Length = 93

 Score = 56.0 bits (28), Expect = 8e-08
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                      
Query: 9  tccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgcttta 68
          |||||| |||||  ||||||||||| |||||| ||||||||||   ||||||||||  | 
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27

                              
Query: 69 atattagttgacagagggag 88
          ||||| ||| ||||||||||
Sbjct: 26 atatttgtttacagagggag 7




>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
          dicoccoides
          Length = 95

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                   
Query: 6  tactccctccgtaaactaatataagagcatttagaacacta 46
          ||||||||| |||||||||||||||| | |||||| |||||
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcacta 51



 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 9  tccctccgtaaactaatataagagcatttagaacacta 46
          |||||| |||||||||||||||| | |||||| |||||
Sbjct: 8  tccctctgtaaactaatataagaccttttagatcacta 45




>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
          vulgare (domesticated barley)
          Length = 78

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                      
Query: 6  tactccctccgtaaactaatataagagc 33
          ||||||||| ||||||||||||||||||
Sbjct: 74 tactccctcggtaaactaatataagagc 47



 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 6  tactccctccgtaaactaatataagag 32
          ||||||||| |||||||||||||||||
Sbjct: 5  tactccctctgtaaactaatataagag 31




>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
          (bread wheat)
          Length = 92

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 6  tactccctccgtaaactaatataagagcatttag 39
          |||||||||||||||  ||||||||||| |||||
Sbjct: 5  tactccctccgtaaagaaatataagagcgtttag 38




>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                    
Query: 6  tactccctccgtaaactaatataagagcatttagaacactat 47
          ||||||||| |||||  ||||||||||| |||||| ||||||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcactat 42