miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
          Length = 93

 Score =  103 bits (52), Expect = 4e-22
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                      
Query: 12 ctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttata 71
          ||||||||| |||||||||||| ||||||||||| |||||||||| ||||||||||||||
Sbjct: 11 ctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgctcttata 70

                  
Query: 72 tttcttta 79
          ||||||||
Sbjct: 71 tttcttta 78



 Score = 79.8 bits (40), Expect = 6e-15
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                      
Query: 12 ctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttata 71
          ||||||||| |||||||||||| ||||||||||||    |||||| ||||||||||||||
Sbjct: 83 ctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgctcttata 24

                  
Query: 72 tttcttta 79
          ||||||||
Sbjct: 23 tttcttta 16




>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
          Length = 92

 Score =  103 bits (52), Expect = 4e-22
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 5  tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 65 cttatatt 72



 Score = 61.9 bits (31), Expect = 1e-09
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                             
Query: 23 aatataagagcatttagatcactaaagtagtgatttaaacgctcttatatt 73
          ||||||||||| ||||||||||||   ||||||| ||||||||||||||||
Sbjct: 72 aatataagagcgtttagatcactactttagtgatctaaacgctcttatatt 22




>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
          Length = 93

 Score = 99.6 bits (50), Expect = 6e-21
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||||||||||||||||||| || |||||||| ||||| ||||||| ||||||||
Sbjct: 5  tactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgct 64

                        
Query: 66 cttatatttcttta 79
          ||||||||||||||
Sbjct: 65 cttatatttcttta 78



 Score = 56.0 bits (28), Expect = 8e-08
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                      
Query: 16 gtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttatatttc 75
          ||||| |||||||||||| ||||||||||||   ||| ||| ||||||| ||||||||| 
Sbjct: 79 gtaaagaaatataagagcgtttagatcactattttagagatctaaacgcccttatatttg 20

              
Query: 76 ttta 79
          ||||
Sbjct: 19 ttta 16




>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| |||||||||| |||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 5  tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 65 cttatatt 72



 Score = 56.0 bits (28), Expect = 8e-08
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||| |||||| ||||||||||| ||||||| ||||   ||||||| |||| |||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 29 cttatatt 22




>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                      
Query: 4  tctactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacg 63
          ||||||| |||||||||| |||||||||||  ||||||||||||||||||||| ||| ||
Sbjct: 91 tctactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcg 32

                    
Query: 64 ctcttatatt 73
          ||||||||||
Sbjct: 31 ctcttatatt 22



 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| |||||||||| |||||||||||  |||||||||||   ||||||| ||| ||||
Sbjct: 5  tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 65 cttatatt 72




>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
          (bread wheat)
          Length = 92

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                      
Query: 16 gtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttatatttc 75
          |||||||||||||||||| || |||||||| |||||||||  ||||||||||||||||||
Sbjct: 79 gtaaacaaatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttc 20

                    
Query: 76 tttaaggagg 85
          |||| |||||
Sbjct: 19 tttacggagg 10



 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||| ||||| |||||||||||| ||||| ||||||    |||||| | ||||||
Sbjct: 5  tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 64

                        
Query: 66 cttatatttcttta 79
          ||||||||| ||||
Sbjct: 65 cttatatttgttta 78




>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
          Length = 93

 Score = 89.7 bits (45), Expect = 6e-18
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                      
Query: 13 tctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttatat 72
          |||||||| |||||||||||| | ||||||||||||||||| || ||||| |||||||||
Sbjct: 12 tctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacactcttatat 71

                       
Query: 73 ttctttaaggagg 85
          ||||||| |||||
Sbjct: 72 ttctttacggagg 84



 Score = 61.9 bits (31), Expect = 1e-09
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                      
Query: 5  ctactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgc 64
          |||||| ||| ||||| |||||||||||  ||||||| ||||   ||||||| || ||||
Sbjct: 90 ctactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgc 31

                         
Query: 65 tcttatatttcttta 79
          |||||||||||||||
Sbjct: 30 tcttatatttcttta 16




>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 87.7 bits (44), Expect = 2e-17
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| |||||||||| |||||||||||||| |||||||||   ||||||| |||| |||
Sbjct: 5  tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgct 64

                              
Query: 66 cttatatttctttaaggagg 85
          |||||||||||||| |||||
Sbjct: 65 cttatatttctttacggagg 84



 Score = 87.7 bits (44), Expect = 2e-17
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||| ||||| ||||||||||||||||||||||||||||||||||| | || |||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 29 cttatatt 22




>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 138

 Score = 87.7 bits (44), Expect = 2e-17
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                       
Query: 6   tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
           ||||| ||| |||||| ||||||||||||||||||||| |||| ||||||| ||||||||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75

                   
Query: 66  cttatatt 73
           ||||||||
Sbjct: 74  cttatatt 67



 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 23  aatataagagcatttagatcactaaagtagtgatttaaacgctcttatatt 73
           ||||||||||| ||||||||||||   || |||| |||| |||||||||||
Sbjct: 67  aatataagagcgtttagatcactattttaatgatctaaatgctcttatatt 117



 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 6  tactctctctgtaaacaaatataagagcatttag 39
          ||||| |||||||||| ||||||||||| |||||
Sbjct: 5  tactccctctgtaaactaatataagagcgtttag 38




>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
          Length = 93

 Score = 87.7 bits (44), Expect = 2e-17
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                      
Query: 2  tttctactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaa 61
          ||||||||| |||||||||  ||||||||||| ||| |||||||||| ||||||| ||||
Sbjct: 1  tttctactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaa 60

                      
Query: 62 cgctcttatatt 73
          ||||||||||||
Sbjct: 61 cgctcttatatt 72



 Score = 60.0 bits (30), Expect = 5e-09
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                    
Query: 16 gtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttatatt 73
          |||||| ||||||||||| ||||||||||||   |||||||  |||||||||||||||
Sbjct: 79 gtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttatatt 22




>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 83.8 bits (42), Expect = 4e-16
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||| ||||| |||||||||||| |||||| |||||||||||| || |||| |||
Sbjct: 5  tactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgct 64

                        
Query: 66 cttatatttcttta 79
          ||||||||||||||
Sbjct: 65 cttatatttcttta 78



 Score = 75.8 bits (38), Expect = 9e-14
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| |||| |||| |||||||||||||||||||| ||||   ||||| | ||||||||
Sbjct: 89 tactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgct 30

                        
Query: 66 cttatatttcttta 79
          ||||||||||||||
Sbjct: 29 cttatatttcttta 16




>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
          Length = 93

 Score = 83.8 bits (42), Expect = 4e-16
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                      
Query: 4  tctactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacg 63
          |||||||  ||||||||| | ||||||||| ||||||||||||||||||| || ||||||
Sbjct: 91 tctactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacg 32

                    
Query: 64 ctcttatatt 73
          ||||||||||
Sbjct: 31 ctcttatatt 22



 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||| |||||  ||||||||||| ||||||| ||||   ||||||| ||||||||
Sbjct: 5  tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64

                
Query: 66 cttata 71
          ||||||
Sbjct: 65 cttata 70




>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
          Length = 93

 Score = 79.8 bits (40), Expect = 6e-15
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| |||||||||| ||||||| | ||||||||||||||||||||| || ||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 29 cttatatt 22




>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
          Length = 100

 Score = 79.8 bits (40), Expect = 6e-15
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                  
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaa 61
          ||||| |||||||||| ||||||||||| |||||||||||||||||||||| ||||
Sbjct: 5  tactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60




>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
          Length = 93

 Score = 77.8 bits (39), Expect = 2e-14
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                      
Query: 12 ctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttata 71
          |||||||||||||||||||||| ||||||||||||   ||||||| || || ||||||||
Sbjct: 11 ctctgtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttata 70

                 
Query: 72 tttcttt 78
          |||||||
Sbjct: 71 tttcttt 77



 Score = 75.8 bits (38), Expect = 9e-14
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                    
Query: 22 aaatataagagcatttagatcactaaagtagtgatttaaacgctcttatatttcttta 79
          |||||||||||  | |||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 73 aaatataagagtgtctagatcactaaagtagtgatctaaacgctcttatatttgttta 16




>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
          Length = 93

 Score = 75.8 bits (38), Expect = 9e-14
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                      
Query: 12 ctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttata 71
          |||||||||| ||||||||| | |||||||||||||||||||||| |||| | |||||||
Sbjct: 11 ctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttata 70

            
Query: 72 tt 73
          ||
Sbjct: 71 tt 72



 Score = 56.0 bits (28), Expect = 8e-08
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| |||||||||| ||||||||| | ||||||||||||   ||||||| |||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 29 cttatatt 22




>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 75.8 bits (38), Expect = 9e-14
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                      
Query: 12 ctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttata 71
          |||||||||| ||||||||||||||||||||||||   ||||||  ||||||||||||||
Sbjct: 83 ctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgctcttata 24

            
Query: 72 tt 73
          ||
Sbjct: 23 tt 22



 Score = 71.9 bits (36), Expect = 1e-12
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||| |||||| ||||||||||| ||||| |||||||| ||||||| |||| |||
Sbjct: 5  tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 65 cttatatt 72




>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
          Length = 91

 Score = 75.8 bits (38), Expect = 9e-14
 Identities = 57/62 (91%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                      
Query: 12 ctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttata 71
          |||||||||| ||||||| ||||||||||||||| |||||||||| |||| |||||||||
Sbjct: 10 ctctgtaaactaatataaaagcatttagatcact-aagtagtgatctaaatgctcttata 68

            
Query: 72 tt 73
          ||
Sbjct: 69 tt 70



 Score = 60.0 bits (30), Expect = 5e-09
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                    
Query: 5  ctactctctctgtaaacaaatataagagcatttagatcacta 46
          |||||| ||| |||||| ||||||||||||||||||||||||
Sbjct: 88 ctactccctccgtaaactaatataagagcatttagatcacta 47




>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
          wheat)
          Length = 93

 Score = 73.8 bits (37), Expect = 4e-13
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                      
Query: 5  ctactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgc 64
          |||||| ||| |||||| |||||||||||||||| |||| |||| ||||||| ||||| |
Sbjct: 90 ctactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacac 31

                   
Query: 65 tcttatatt 73
          |||||||||
Sbjct: 30 tcttatatt 22



 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                      
Query: 5  ctactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgc 64
          |||||| ||| |||||| ||||||||||  ||||||||||||   || ||||||||| ||
Sbjct: 4  ctactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgc 63

                   
Query: 65 tcttatatt 73
          |||||||||
Sbjct: 64 tcttatatt 72




>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
          Length = 93

 Score = 73.8 bits (37), Expect = 4e-13
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                      
Query: 5  ctactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgc 64
          |||||| |||||||||| ||||||||||| ||||||| |||||||||||| | |||| ||
Sbjct: 4  ctactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgc 63

                   
Query: 65 tcttatatt 73
          | |||||||
Sbjct: 64 ttttatatt 72



 Score = 56.0 bits (28), Expect = 8e-08
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                      
Query: 14 ctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttatatt 73
          |||||||| ||||||| |||||||||| |||||   |||| || ||||||||||||||||
Sbjct: 81 ctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgctcttatatt 22




>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
          Length = 91

 Score = 73.8 bits (37), Expect = 4e-13
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                       
Query: 35 tttagatcactaaagtagtgatttaaacgctcttatatttcttta 79
          |||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 32 tttagatcactaaagtagtgatctaaacactcttatatttcttta 76



 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                   
Query: 6  tactctctctgtaaacaaatataagagcatttagatcacta 46
          ||||| ||||||||| |||||||||||  ||||||||||||
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcacta 47




>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
          Length = 93

 Score = 73.8 bits (37), Expect = 4e-13
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                      
Query: 5  ctactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgc 64
          |||||| ||| |||||| ||||||||||| ||||||  |||||| ||||||| |||||||
Sbjct: 90 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgc 31

                   
Query: 65 tcttatatt 73
          |||||||||
Sbjct: 30 tcttatatt 22



 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| |||||||||| ||||||||||| ||||||||||||   ||||  | ||||||||
Sbjct: 5  tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 65 cttatatt 72




>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
          Length = 100

 Score = 71.9 bits (36), Expect = 1e-12
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                      
Query: 12 ctctgtaaacaaatataagagcatttagatcactaaagtagtga 55
          |||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 11 ctctgtaaactaatataagagcatttagatcactaaaatagtga 54




>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
          Length = 93

 Score = 71.9 bits (36), Expect = 1e-12
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| |||| ||||| ||||||||||  |||||||||||||| ||||| | ||||||||
Sbjct: 5  tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 65 cttatatt 72



 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                      
Query: 5  ctactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgc 64
          |||||| ||| |||||| ||||||||||| |||||| |||||   ||||||| ||||| |
Sbjct: 90 ctactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacac 31

                   
Query: 65 tcttatatt 73
          |||||||||
Sbjct: 30 tcttatatt 22




>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 93

 Score = 71.9 bits (36), Expect = 1e-12
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| |||||||||| |||||||||| |||||||| |||||| ||||| | |||| |||
Sbjct: 5  tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 65 cttatatt 72



 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 16 gtaaacaaatataagagcatttagatcacta 46
          |||||| |||||||||||||||||| |||||
Sbjct: 79 gtaaactaatataagagcatttagaacacta 49




>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
          Length = 93

 Score = 69.9 bits (35), Expect = 6e-12
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                      
Query: 7  actctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctc 66
          |||| ||| |||||| ||||||||||| |||||||||||||| |||||||  |||| |||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29

                 
Query: 67 ttatatt 73
          |||||||
Sbjct: 28 ttatatt 22



 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||| |||||  ||||||||||  ||| ||||||||   ||||||| ||||||||
Sbjct: 5  tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 65 cttatatt 72




>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
          Length = 87

 Score = 69.9 bits (35), Expect = 6e-12
 Identities = 64/74 (86%), Gaps = 6/74 (8%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||||||||| |||||||||||| |||||||||      ||||||| ||||||||
Sbjct: 5  tactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgct 58

                        
Query: 66 cttatatttcttta 79
          ||||||||||||||
Sbjct: 59 cttatatttcttta 72



 Score = 69.9 bits (35), Expect = 6e-12
 Identities = 64/74 (86%), Gaps = 6/74 (8%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||||||||| |||||||||||| ||||||||||||      |||| ||||||||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgct 30

                        
Query: 66 cttatatttcttta 79
          ||||||||||||||
Sbjct: 29 cttatatttcttta 16




>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
          Length = 92

 Score = 65.9 bits (33), Expect = 9e-11
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                   
Query: 6  tactctctctgtaaacaaatataagagcatttagatcacta 46
          ||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcacta 48



 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 50/57 (87%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                   
Query: 17 taaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttatatt 73
          ||||| ||||||| ||| ||||||||| ||| |||||||| |||| |||||||||||
Sbjct: 16 taaactaatataaaagcgtttagatcattaa-gtagtgatctaaatgctcttatatt 71




>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
          vulgare (domesticated barley)
          Length = 93

 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||| |||||| ||||||||| ||||||||| ||| |||||||| | |||| |||
Sbjct: 5  tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 65 cttatatt 72



 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                        
Query: 17 taaacaaatataagagcatttagatcacta 46
          ||||| |||||||||||||||||| |||||
Sbjct: 78 taaactaatataagagcatttagaacacta 49




>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
          Length = 93

 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| ||||||||| |||||||||| ||||||||| ||||   ||||||| |||||  |
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 30

                              
Query: 66 cttatatttctttaaggagg 85
          ||||||||||| || |||||
Sbjct: 29 cttatatttctgtacggagg 10



 Score = 60.0 bits (30), Expect = 5e-09
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                    
Query: 22 aaatataagagcatttagatcactaaagtagtgatttaaacgctcttatatttcttta 79
          ||||||||||   ||||||||||||||||||| || |||| | |||||||||||||||
Sbjct: 21 aaatataagaatgtttagatcactaaagtagttatctaaatgatcttatatttcttta 78




>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
          subsp. dicoccoides
          Length = 96

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 58/67 (86%), Gaps = 3/67 (4%)
 Strand = Plus / Minus

                                                                      
Query: 16 gtaaacaaatataagagcatttagatcactaaa---gtagtgatttaaacgctcttatat 72
          ||||| ||||| |||||| | ||||||||||||   |||||||| |||||| ||||||||
Sbjct: 82 gtaaagaaatacaagagcgtctagatcactaaaatagtagtgatctaaacgttcttatat 23

                 
Query: 73 ttcttta 79
          |||||||
Sbjct: 22 ttcttta 16




>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
          dicoccoides
          Length = 95

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 56/64 (87%), Gaps = 2/64 (3%)
 Strand = Plus / Plus

                                                                      
Query: 12 ctctgtaaacaaatataagagcatttagatcactaa--agtagtgatttaaacgctctta 69
          |||||||||| ||||||||| | |||||||||||||  ||||||||| |||| | |||||
Sbjct: 11 ctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtctta 70

              
Query: 70 tatt 73
          ||||
Sbjct: 71 tatt 74



 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                   
Query: 6  tactctctctgtaaacaaatataagagcatttagatcacta 46
          ||||| |||||||||| ||||||||| | ||||||||||||
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcacta 51




>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
          Length = 93

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                   
Query: 6  tactctctctgtaaacaaatataagagcatttagatcacta 46
          ||||| |||||||||| ||||||| ||||||||||||||||
Sbjct: 5  tactccctctgtaaactaatataaaagcatttagatcacta 45



 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                   
Query: 17 taaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttatatt 73
          ||||| ||||||||||||||||||| | |||| ||||||| |||| ||| |||||||
Sbjct: 78 taaactaatataagagcatttagattattaaaatagtgatctaaatgcttttatatt 22




>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
          (bread wheat)
          Length = 99

 Score = 56.0 bits (28), Expect = 8e-08
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                          
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagt 53
          ||||| ||||||||| |||||||||| | |||||||||||||| ||||
Sbjct: 5  tactccctctgtaaagaaatataagatcgtttagatcactaaaatagt 52



 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                        
Query: 50 tagtgatttaaacgctcttatatttcttta 79
          ||||||| |||||| |||||||||||||||
Sbjct: 45 tagtgatctaaacgatcttatatttcttta 16




>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
          Length = 93

 Score = 54.0 bits (27), Expect = 3e-07
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                     
Query: 15 tgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttatatt 73
          ||||||| ||||||||||| || |||||| |||| | ||||| ||||| ||||||||||
Sbjct: 14 tgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctcttatatt 72




>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 82

 Score = 54.0 bits (27), Expect = 3e-07
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                             
Query: 12 ctctgtaaacaaatataagagcatttagatcacta 46
          ||||||||| |||||||||| ||||||||||||||
Sbjct: 72 ctctgtaaagaaatataagatcatttagatcacta 38




>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
          Length = 93

 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                    
Query: 16 gtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttatatt 73
          |||||| ||||||||||| ||||||  ||||||||| |||| |||| ||| |||||||
Sbjct: 15 gtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgcttttatatt 72



 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| || ||||||| ||||||| ||||||||||||| ||   ||||  | ||||||||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 29 cttatatt 22




>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
          (bread wheat)
          Length = 96

 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 61/72 (84%), Gaps = 3/72 (4%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcacta---aagtagtgatttaaac 62
          ||||| || ||||||  ||||||||||| ||||||||||||    ||||||||| |||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcactagagtagtagtgatctaaac 33

                      
Query: 63 gctcttatattt 74
          ||||| ||||||
Sbjct: 32 gctctcatattt 21




>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
          (bread wheat)
          Length = 93

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                   
Query: 6  tactctctctgtaaacaaatataagagcatttagatcacta 46
          ||||| |||||||||| ||||||||| | ||||||||||||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcacta 49




>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
          subsp. dicoccoides
          Length = 93

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                   
Query: 6  tactctctctgtaaacaaatataagagcatttagatcacta 46
          ||||| |||||||||| ||||||||||  ||||||||||||
Sbjct: 5  tactccctctgtaaactaatataagagtgtttagatcacta 45




>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
          Length = 91

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 58/68 (85%), Gaps = 2/68 (2%)
 Strand = Plus / Plus

                                                                      
Query: 6  tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
          ||||| |||||||||| ||||||| ||  ||||||| |||||| ||||  | ||||||||
Sbjct: 5  tactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgct 62

                  
Query: 66 cttatatt 73
          ||||||||
Sbjct: 63 cttatatt 70